RNA–Protein interactions for RNA: ENST00000509642.5

PPARGC1A-208, Transcript of PPARG coactivator 1 alpha, human

TSL 2

Gene PPARGC1A, Length 1,391 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPARGC1A-208	ENST00000509642	ARNT2	Q9HBZ2	717 aa		4.91	□□□□□ -1.62
PPARGC1A-208	ENST00000509642	TMPRSS4	Q9NRS4	437 aa		4.91	□□□□□ -1.62
PPARGC1A-208	ENST00000509642	CXXC1	Q9P0U4	656 aa	Predicted RBP	4.91	□□□□□ -1.62
PPARGC1A-208	ENST00000509642	INTU	Q9ULD6	942 aa		4.91	□□□□□ -1.62
PPARGC1A-208	ENST00000509642	NRAP	Q86VF7	1730 aa		4.9	□□□□□ -1.62
PPARGC1A-208	ENST00000509642	EP400	Q96L91	3159 aa		4.9	□□□□□ -1.62
PPARGC1A-208	ENST00000509642	KAT6B	Q8WYB5	2073 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	KRTAP9-6	A0A140TA67	174 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	GOLGA6C	A6NDK9	693 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	GOLGA6B	A6NDN3	693 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	TBX3	O15119	743 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	TSPAN6	O43657	245 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	LILRA1	O75019	489 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	BPNT1	O95861	308 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	GOLGA6D	P0CG33	693 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	COL6A1	P12109	1028 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	HCLS1	P14317	486 aa	Predicted RBP	4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	RXRB	P28702	533 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	CDC27	P30260	824 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	PTGIR	P43119	386 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	TERF1	P54274	439 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	DAB2	P98082	770 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	FKBP4	Q02790	459 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	EXOSC9	Q06265	439 aa	Known RBP	4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	NCOA4	Q13772	614 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	KRT24	Q2M2I5	525 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	KANK3	Q6NY19	840 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	MCM10	Q7L590	875 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	ZNF784	Q8NCA9	323 aa	Predicted RBP	4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	SVIP	Q8NHG7	77 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	NEUROD6	Q96NK8	337 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	CRBN	Q96SW2	442 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	MKNK1	Q9BUB5	465 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	TRIM55	Q9BYV6	548 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	PPCS	Q9HAB8	311 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	RNF19A	Q9NV58	838 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	GOLGA6A	Q9NYA3	693 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	DDX41	Q9UJV9	622 aa	Known RBP	4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	USP21	Q9UK80	565 aa		4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	COL14A1	Q05707	1796 aa	Known RBP	4.9	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	RTL1	A6NKG5	1358 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	KDR	P35968	1356 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	DYTN	A2CJ06	578 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	ESPN	B1AK53	854 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	ERVH48-1	M5A8F1	160 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	RGS12	O14924	1447 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	TREH	O43280	583 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	NDUFB5	O43674	189 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	GLI3	P10071	1580 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	IRS1	P35568	1242 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	RAB15	P59190	212 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	EXOSC10	Q01780	885 aa	Known RBP	4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	SRSF11	Q05519	484 aa	Known RBP	4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	GRAMD1B	Q3KR37	738 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	ARSH	Q5FYA8	562 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	TAS1R3	Q7RTX0	852 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	TTC30B	Q8N4P2	665 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	TSPYL6	Q8N831	410 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	TEX19	Q8NA77	164 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	KDF1	Q8NAX2	398 aa	Predicted RBP	4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	SH3TC2	Q8TF17	1288 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	ANKRD24	Q8TF21	1146 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	APPBP2	Q92624	585 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	MKL1	Q969V6	931 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	SCARF2	Q96GP6	870 aa	Predicted RBP	4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	PRIMPOL	Q96LW4	560 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	CHMP4B	Q9H444	224 aa	Known RBP	4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	SNTG2	Q9NY99	539 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	MIS18A	Q9NYP9	233 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	SEPT3	Q9UH03	358 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	NOL7	Q9UMY1	257 aa	Known RBP	4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	PCDHB9	Q9Y5E1	797 aa		4.89	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	VIRMA	Q69YN4	1812 aa	Known RBP	4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	FAM208A	Q9UK61	1670 aa	Known RBP	4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	CAMTA1	Q9Y6Y1	1673 aa		4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	KIAA0232	Q92628	1395 aa		4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	CCDC163	A0A0D9SF12	145 aa		4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	BICDL2	A1A5D9	508 aa		4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	CCDC85C	A6NKD9	419 aa		4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	ELL2	O00472	640 aa	Predicted RBP	4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	FBXO45	P0C2W1	286 aa		4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	CT47B1	P0C2W7	299 aa	Predicted RBP	4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	ZNF853	P0CG23	659 aa		4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	CNGA1	P29973	690 aa		4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	ADD1	P35611	737 aa	Known RBP	4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	RARS	P54136	660 aa	Known RBP	4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	RACK1	P63244	317 aa	Known RBP	4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	ECM1	Q16610	540 aa		4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	BRDT	Q58F21	947 aa	Predicted RBP	4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	LYPD4	Q6UWN0	246 aa		4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	LYSMD3	Q7Z3D4	306 aa		4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	PGBD3	Q8N328	593 aa		4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	NGEF	Q8N5V2	710 aa		4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	KCNH5	Q8NCM2	988 aa		4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	MYRIP	Q8NFW9	859 aa		4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	ATL2	Q8NHH9	583 aa		4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	PANK1	Q8TE04	598 aa		4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	SLC39A13	Q96H72	371 aa		4.88	□□□□□ -1.63
PPARGC1A-208	ENST00000509642	DEPDC7	Q96QD5	511 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms