RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 CAPN2P17655 700 aa13.32□□□□□ -0.28
RNF4-212ENST00000509258 CYP7A1P22680 504 aa13.32□□□□□ -0.28
RNF4-212ENST00000509258 TREML2Q5T2D2 321 aa13.32□□□□□ -0.28
RNF4-212ENST00000509258 ANKRD13CQ8N6S4 541 aa13.32□□□□□ -0.28
RNF4-212ENST00000509258 MAGEB6Q8N7X4 407 aa13.32□□□□□ -0.28
RNF4-212ENST00000509258 BCL11AQ9H165 835 aa13.32□□□□□ -0.28
RNF4-212ENST00000509258 UNC93B1Q9H1C4 597 aa13.32□□□□□ -0.28
RNF4-212ENST00000509258 PALD1Q9ULE6 856 aa13.32□□□□□ -0.28
RNF4-212ENST00000509258 IGSF3O75054 1194 aa13.31□□□□□ -0.28
RNF4-212ENST00000509258 ELNP15502 786 aa13.31□□□□□ -0.28
RNF4-212ENST00000509258 PABPC4Q13310 644 aaKnown RBP eCLIP13.31□□□□□ -0.28
RNF4-212ENST00000509258 RPAP2Q8IXW5 612 aaPredicted RBP13.31□□□□□ -0.28
RNF4-212ENST00000509258 ZNF280CQ8ND82 737 aa13.31□□□□□ -0.28
RNF4-212ENST00000509258 COA7Q96BR5 231 aa13.31□□□□□ -0.28
RNF4-212ENST00000509258 NR2E3Q9Y5X4 410 aa13.31□□□□□ -0.28
RNF4-212ENST00000509258 SGPL1O95470 568 aa13.3□□□□□ -0.28
RNF4-212ENST00000509258 BAG3O95817 575 aa13.3□□□□□ -0.28
RNF4-212ENST00000509258 CAP2P40123 477 aa13.3□□□□□ -0.28
RNF4-212ENST00000509258 GCLCP48506 637 aaPredicted RBP13.3□□□□□ -0.28
RNF4-212ENST00000509258 SPP2Q13103 211 aa13.3□□□□□ -0.28
RNF4-212ENST00000509258 ERC1Q8IUD2 1116 aa13.3□□□□□ -0.28
RNF4-212ENST00000509258 HERC5Q9UII4 1024 aaKnown RBP13.3□□□□□ -0.28
RNF4-212ENST00000509258 TAOK2Q9UL54 1235 aa13.3□□□□□ -0.28
RNF4-212ENST00000509258 SZT2Q5T011 3432 aa13.3□□□□□ -0.28
RNF4-212ENST00000509258 SMARCA5O60264 1052 aaPredicted RBP13.29□□□□□ -0.28
RNF4-212ENST00000509258 MS4A1P11836 297 aa13.29□□□□□ -0.28
RNF4-212ENST00000509258 PLCG2P16885 1265 aa13.29□□□□□ -0.28
RNF4-212ENST00000509258 HMGCS2P54868 508 aa13.29□□□□□ -0.28
RNF4-212ENST00000509258 METTL16Q86W50 562 aaKnown RBP13.29□□□□□ -0.28
RNF4-212ENST00000509258 KIF1BPQ96EK5 621 aa13.29□□□□□ -0.28
RNF4-212ENST00000509258 DEFB118Q96PH6 123 aa13.29□□□□□ -0.28
RNF4-212ENST00000509258 RIOK1Q9BRS2 568 aaKnown RBP13.29□□□□□ -0.28
RNF4-212ENST00000509258 AS3MTQ9HBK9 375 aa13.29□□□□□ -0.28
RNF4-212ENST00000509258 PAK6Q9NQU5 681 aaPredicted RBP13.29□□□□□ -0.28
RNF4-212ENST00000509258 RBM27Q9P2N5 1060 aaKnown RBP13.29□□□□□ -0.28
RNF4-212ENST00000509258 TCRBV5S4A2TA0A5A2 114 aa13.28□□□□□ -0.28
RNF4-212ENST00000509258 USP17L5A8MUK1 530 aa13.28□□□□□ -0.28
RNF4-212ENST00000509258 PEX10O60683 326 aa13.28□□□□□ -0.28
RNF4-212ENST00000509258 GDF11O95390 407 aa13.28□□□□□ -0.28
RNF4-212ENST00000509258 PDE6AP16499 860 aa13.28□□□□□ -0.28
RNF4-212ENST00000509258 TRIM34Q9BYJ4 488 aa13.28□□□□□ -0.28
RNF4-212ENST00000509258 DHX36Q9H2U1 1008 aaKnown RBP13.28□□□□□ -0.28
RNF4-212ENST00000509258 PI4KBQ9UBF8 816 aa13.28□□□□□ -0.28
RNF4-212ENST00000509258 RLFQ13129 1914 aa13.27□□□□□ -0.28
RNF4-212ENST00000509258 SMIM22K7EJ46 135 aa13.27□□□□□ -0.29
RNF4-212ENST00000509258 GOLIM4O00461 696 aa13.27□□□□□ -0.29
RNF4-212ENST00000509258 EVI5O60447 810 aa13.27□□□□□ -0.29
RNF4-212ENST00000509258 TFRCP02786 760 aaKnown RBP13.27□□□□□ -0.29
RNF4-212ENST00000509258 HMGCRP04035 888 aa13.27□□□□□ -0.29
RNF4-212ENST00000509258 ASNSP08243 561 aa13.27□□□□□ -0.29
RNF4-212ENST00000509258 PDE3AQ14432 1141 aa13.27□□□□□ -0.29
RNF4-212ENST00000509258 SH3D19Q5HYK7 790 aa13.27□□□□□ -0.29
RNF4-212ENST00000509258 DNAJC2Q99543 621 aaKnown RBP13.27□□□□□ -0.29
RNF4-212ENST00000509258 ASCC2Q9H1I8 757 aaPredicted RBP13.27□□□□□ -0.29
RNF4-212ENST00000509258 PARP14Q460N5 1801 aa13.27□□□□□ -0.29
RNF4-212ENST00000509258 IRX3P78415 501 aaPredicted RBP13.26□□□□□ -0.29
RNF4-212ENST00000509258 MTMR2Q13614 643 aa13.26□□□□□ -0.29
RNF4-212ENST00000509258 HSP90AB4PQ58FF6 505 aa13.26□□□□□ -0.29
RNF4-212ENST00000509258 CERS3Q8IU89 383 aa13.26□□□□□ -0.29
RNF4-212ENST00000509258 CLASRPQ8N2M8 674 aaKnown RBP13.26□□□□□ -0.29
RNF4-212ENST00000509258 WDR18Q9BV38 432 aa13.26□□□□□ -0.29
RNF4-212ENST00000509258 CRISPLD2Q9H0B8 497 aa13.26□□□□□ -0.29
RNF4-212ENST00000509258 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.26□□□□□ -0.29
RNF4-212ENST00000509258 PRO3102Q9H379 93 aa13.26□□□□□ -0.29
RNF4-212ENST00000509258 BOLA2Q9H3K6 86 aa13.26□□□□□ -0.29
RNF4-212ENST00000509258 ZBTB21Q9ULJ3 1066 aa13.26□□□□□ -0.29
RNF4-212ENST00000509258 ALPK3Q96L96 1907 aa13.25□□□□□ -0.29
RNF4-212ENST00000509258 ZNF532Q9HCE3 1301 aa13.25□□□□□ -0.29
RNF4-212ENST00000509258 A0A1W2PPC1 479 aa13.25□□□□□ -0.29
RNF4-212ENST00000509258 RAB11FIP3O75154 756 aa13.25□□□□□ -0.29
RNF4-212ENST00000509258 HMMRO75330 724 aa13.25□□□□□ -0.29
RNF4-212ENST00000509258 CYP2D6P10635 497 aa13.25□□□□□ -0.29
RNF4-212ENST00000509258 PLCD1P51178 756 aa13.25□□□□□ -0.29
RNF4-212ENST00000509258 MAP3K12Q12852 859 aa13.25□□□□□ -0.29
RNF4-212ENST00000509258 POTEEQ6S8J3 1075 aa13.25□□□□□ -0.29
RNF4-212ENST00000509258 LCORLQ8N3X6 602 aa13.25□□□□□ -0.29
RNF4-212ENST00000509258 CRACR2BQ8N4Y2 399 aaPredicted RBP13.25□□□□□ -0.29
RNF4-212ENST00000509258 ANKLE1Q8NAG6 615 aa13.25□□□□□ -0.29
RNF4-212ENST00000509258 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.25□□□□□ -0.29
RNF4-212ENST00000509258 GINM1Q9NU53 330 aa13.25□□□□□ -0.29
RNF4-212ENST00000509258 TMOD4Q9NZQ9 345 aa13.25□□□□□ -0.29
RNF4-212ENST00000509258 MORF4L1Q9UBU8 362 aa13.25□□□□□ -0.29
RNF4-212ENST00000509258 LAMA3Q16787 3333 aa13.25□□□□□ -0.29
RNF4-212ENST00000509258 HLA-DOAP06340 250 aa13.24□□□□□ -0.29
RNF4-212ENST00000509258 IFIT2P09913 472 aaKnown RBP13.24□□□□□ -0.29
RNF4-212ENST00000509258 BACE1P56817 501 aa13.24□□□□□ -0.29
RNF4-212ENST00000509258 SLC9C2Q5TAH2 1124 aa13.24□□□□□ -0.29
RNF4-212ENST00000509258 TSHZ3Q63HK5 1081 aa13.24□□□□□ -0.29
RNF4-212ENST00000509258 NECAB2Q7Z6G3 386 aa13.24□□□□□ -0.29
RNF4-212ENST00000509258 FOXP4Q8IVH2 680 aaPredicted RBP13.24□□□□□ -0.29
RNF4-212ENST00000509258 SDR42E1Q8WUS8 393 aa13.24□□□□□ -0.29
RNF4-212ENST00000509258 SOCS4Q8WXH5 440 aa13.24□□□□□ -0.29
RNF4-212ENST00000509258 PCDHB15Q9Y5E8 787 aa13.24□□□□□ -0.29
RNF4-212ENST00000509258 RPTORQ8N122 1335 aa13.23□□□□□ -0.29
RNF4-212ENST00000509258 MAGEB6P1A0A0J9YX57 407 aa13.23□□□□□ -0.29
RNF4-212ENST00000509258 C19orf81C9J6K1 198 aa13.23□□□□□ -0.29
RNF4-212ENST00000509258 PRKAB2O43741 272 aa13.23□□□□□ -0.29
RNF4-212ENST00000509258 GH2P01242 217 aa13.23□□□□□ -0.29
RNF4-212ENST00000509258 ATP5JP18859 108 aa13.23□□□□□ -0.29
RNF4-212ENST00000509258 HOXA7P31268 230 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms