RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 CEP131Q9UPN4 1083 aa12.58□□□□□ -0.4
SEC31A-228ENST00000509142 LRP5O75197 1615 aa12.58□□□□□ -0.4
SEC31A-228ENST00000509142 RPS6KA4O75676 772 aa12.58□□□□□ -0.4
SEC31A-228ENST00000509142 PPP2R5BQ15173 497 aa12.58□□□□□ -0.4
SEC31A-228ENST00000509142 SYCP1Q15431 976 aa12.58□□□□□ -0.4
SEC31A-228ENST00000509142 RIOK1Q9BRS2 568 aaKnown RBP12.58□□□□□ -0.4
SEC31A-228ENST00000509142 FOXP1Q9H334 677 aaPredicted RBP12.58□□□□□ -0.4
SEC31A-228ENST00000509142 KCND1Q9NSA2 647 aa12.58□□□□□ -0.4
SEC31A-228ENST00000509142 hCG_1642624A0A1W2PR95 340 aa12.58□□□□□ -0.4
SEC31A-228ENST00000509142 SMIM22K7EJ46 135 aa12.58□□□□□ -0.4
SEC31A-228ENST00000509142 FAM182BQ5T319 152 aa12.58□□□□□ -0.4
SEC31A-228ENST00000509142 RESP18Q5W5W9 173 aa12.58□□□□□ -0.4
SEC31A-228ENST00000509142 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.58□□□□□ -0.4
SEC31A-228ENST00000509142 CNTNAP4Q9C0A0 1308 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 SEMA3EO15041 775 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 PTPN14Q15678 1187 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 KMT5BQ4FZB7 885 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 SLC10A5Q5PT55 438 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 PTF1AQ7RTS3 328 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 DZIP1Q86YF9 867 aaKnown RBP12.57□□□□□ -0.4
SEC31A-228ENST00000509142 BPIFA3Q9BQP9 254 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 BRIP1Q9BX63 1249 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 BRMS1Q9HCU9 246 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 ANKIB1Q9P2G1 1089 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 ANAPC4Q9UJX5 808 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 HPSEQ9Y251 543 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 V9GY48 417 aaPredicted RBP12.57□□□□□ -0.4
SEC31A-228ENST00000509142 KLRK1P26718 216 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 RCAN1P53805 252 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 GSDMDP57764 484 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 MECOMQ03112 1051 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 TMC6Q7Z403 805 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 PDILTQ8N807 584 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 ENAHQ8N8S7 591 aaPredicted RBP12.57□□□□□ -0.4
SEC31A-228ENST00000509142 VPS54Q9P1Q0 977 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 LONRF3Q496Y0 759 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 FBXO33Q7Z6M2 555 aa12.57□□□□□ -0.4
SEC31A-228ENST00000509142 CTCFLQ8NI51 663 aaPredicted RBP12.57□□□□□ -0.4
SEC31A-228ENST00000509142 RNF26Q9BY78 433 aaPredicted RBP12.57□□□□□ -0.4
SEC31A-228ENST00000509142 SERPINC1P01008 464 aa12.56□□□□□ -0.4
SEC31A-228ENST00000509142 BMP6P22004 513 aa12.56□□□□□ -0.4
SEC31A-228ENST00000509142 RFC4P35249 363 aa12.56□□□□□ -0.4
SEC31A-228ENST00000509142 SLC4A8Q2Y0W8 1093 aa12.56□□□□□ -0.4
SEC31A-228ENST00000509142 KRBA2Q6ZNG9 492 aa12.56□□□□□ -0.4
SEC31A-228ENST00000509142 CCDC34Q96HJ3 373 aa12.56□□□□□ -0.4
SEC31A-228ENST00000509142 PHLPP1O60346 1717 aa12.56□□□□□ -0.4
SEC31A-228ENST00000509142 CALM1P0DP23 149 aa12.56□□□□□ -0.4
SEC31A-228ENST00000509142 CALM2P0DP24 149 aa12.56□□□□□ -0.4
SEC31A-228ENST00000509142 CALM3P0DP25 149 aa12.56□□□□□ -0.4
SEC31A-228ENST00000509142 GOLGA8FQ08AF8 430 aa12.56□□□□□ -0.4
SEC31A-228ENST00000509142 GOLGA8DPQ0D2H9 430 aa12.56□□□□□ -0.4
SEC31A-228ENST00000509142 NSUN4Q96CB9 384 aaKnown RBP12.56□□□□□ -0.4
SEC31A-228ENST00000509142 FOXN1O15353 648 aa12.56□□□□□ -0.4
SEC31A-228ENST00000509142 SEC23AQ15436 765 aa12.56□□□□□ -0.4
SEC31A-228ENST00000509142 VPS72Q15906 364 aa12.56□□□□□ -0.4
SEC31A-228ENST00000509142 CTR9Q6PD62 1173 aa12.56□□□□□ -0.4
SEC31A-228ENST00000509142 OXER1Q8TDS5 423 aa12.56□□□□□ -0.4
SEC31A-228ENST00000509142 PPP1R13BQ96KQ4 1090 aa12.56□□□□□ -0.4
SEC31A-228ENST00000509142 RBM28Q9NW13 759 aaKnown RBP12.56□□□□□ -0.4
SEC31A-228ENST00000509142 PCDHB6Q9Y5E3 794 aa12.56□□□□□ -0.4
SEC31A-228ENST00000509142 UBAP1LF5GYI3 381 aa12.55□□□□□ -0.4
SEC31A-228ENST00000509142 POLR2DO15514 142 aaKnown RBP12.55□□□□□ -0.4
SEC31A-228ENST00000509142 PRDX5P30044 214 aa12.55□□□□□ -0.4
SEC31A-228ENST00000509142 UTP14CQ5TAP6 766 aaKnown RBP12.55□□□□□ -0.4
SEC31A-228ENST00000509142 RC3H1Q5TC82 1133 aaKnown RBP12.55□□□□□ -0.4
SEC31A-228ENST00000509142 TUBE1Q9UJT0 475 aa12.55□□□□□ -0.4
SEC31A-228ENST00000509142 DDX41Q9UJV9 622 aaKnown RBP12.55□□□□□ -0.4
SEC31A-228ENST00000509142 TRIM75PA6NK02 468 aa12.55□□□□□ -0.4
SEC31A-228ENST00000509142 TSPY2A6NKD2 308 aa12.55□□□□□ -0.4
SEC31A-228ENST00000509142 PCP11498 1178 aaKnown RBP12.55□□□□□ -0.4
SEC31A-228ENST00000509142 GRIN1Q05586 938 aa12.55□□□□□ -0.4
SEC31A-228ENST00000509142 PDE4BQ07343 736 aa12.55□□□□□ -0.4
SEC31A-228ENST00000509142 FAM47AQ5JRC9 791 aa12.55□□□□□ -0.4
SEC31A-228ENST00000509142 PCDHA5Q9Y5H7 936 aa12.55□□□□□ -0.4
SEC31A-228ENST00000509142 KRT2P35908 639 aa12.55□□□□□ -0.4
SEC31A-228ENST00000509142 TOB1P50616 345 aaPredicted RBP12.55□□□□□ -0.4
SEC31A-228ENST00000509142 MYL5Q02045 173 aa12.55□□□□□ -0.4
SEC31A-228ENST00000509142 SPTY2D1Q68D10 685 aaPredicted RBP12.55□□□□□ -0.4
SEC31A-228ENST00000509142 METTL16Q86W50 562 aaKnown RBP12.55□□□□□ -0.4
SEC31A-228ENST00000509142 KIF18AQ8NI77 898 aa12.55□□□□□ -0.4
SEC31A-228ENST00000509142 MCM9Q9NXL9 1143 aa12.55□□□□□ -0.4
SEC31A-228ENST00000509142 SFPQP23246 707 aaKnown RBP eCLIP12.54□□□□□ -0.4
SEC31A-228ENST00000509142 PTPREP23469 700 aa12.54□□□□□ -0.4
SEC31A-228ENST00000509142 ELF2Q15723 593 aa12.54□□□□□ -0.4
SEC31A-228ENST00000509142 CFAP100Q494V2 611 aa12.54□□□□□ -0.4
SEC31A-228ENST00000509142 INTS13Q9NVM9 706 aa12.54□□□□□ -0.4
SEC31A-228ENST00000509142 WNK3Q9BYP7 1800 aa12.54□□□□□ -0.4
SEC31A-228ENST00000509142 TMEM232C9JQI7 657 aa12.54□□□□□ -0.4
SEC31A-228ENST00000509142 PLEKHA8P1O95397 391 aa12.54□□□□□ -0.4
SEC31A-228ENST00000509142 USP5P45974 858 aa12.54□□□□□ -0.4
SEC31A-228ENST00000509142 FANCCQ00597 558 aa12.54□□□□□ -0.4
SEC31A-228ENST00000509142 FBXO38Q6PIJ6 1188 aa12.54□□□□□ -0.4
SEC31A-228ENST00000509142 ARHGEF1Q92888 912 aaKnown RBP12.54□□□□□ -0.4
SEC31A-228ENST00000509142 ZNF446Q9NWS9 450 aa12.54□□□□□ -0.4
SEC31A-228ENST00000509142 IMPACTQ9P2X3 320 aa12.54□□□□□ -0.4
SEC31A-228ENST00000509142 ARAP2Q8WZ64 1704 aa12.54□□□□□ -0.4
SEC31A-228ENST00000509142 IKBKBO14920 756 aa12.54□□□□□ -0.4
SEC31A-228ENST00000509142 CDK11BP21127 795 aaKnown RBP12.54□□□□□ -0.4
SEC31A-228ENST00000509142 UBASH3AP57075 661 aa12.54□□□□□ -0.4
SEC31A-228ENST00000509142 NOL10Q9BSC4 688 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms