RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 EMILIN1Q9Y6C2 1016 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 TMEM2Q9UHN6 1383 aa11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 ZNF142P52746 1687 aaPredicted RBP11.29□□□□□ -0.6
PDGFRA-207ENST00000509092 SMNDC1O75940 238 aaKnown RBP eCLIP11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 SSBP05455 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 FESP07332 822 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 SLMAPQ14BN4 828 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 PTGISQ16647 500 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 ALS2CLQ60I27 953 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 EBF2Q9HAK2 575 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 CLIC4Q9Y696 253 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 ERICH2A1L162 156 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 MGRN1O60291 552 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 CTDNEP1O95476 244 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 NR1I3Q14994 352 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 MCM10Q7L590 875 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 NLRP14Q86W24 1093 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 MYCBPAPQ8TBZ2 947 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 RUBCNQ92622 972 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 NEK1Q96PY6 1258 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 SPAG5Q96R06 1193 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 CORO1CQ9ULV4 474 aaPredicted RBP11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 SALL1Q9NSC2 1324 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 OVOS2A0A0G2JMS6 1433 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 OVOS2A0A0J9YW53 1432 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 OVOS2Q6IE36 1432 aa11.28□□□□□ -0.6
PDGFRA-207ENST00000509092 NRKQ7Z2Y5 1582 aa11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 LIN7AO14910 233 aaPredicted RBP11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 ALDH1L1O75891 902 aa11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 RTN3O95197 1032 aaPredicted RBP11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 FAM107AO95990 144 aa11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 FECHP22830 423 aa11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 HDLBPQ00341 1268 aaKnown RBP11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 MTA1Q13330 715 aa11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 XRCC4Q13426 336 aa11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 SAFB2Q14151 953 aaKnown RBP eCLIP11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 ACCSLQ4AC99 568 aa11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 EMC10Q5UCC4 262 aa11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 TRIM74Q86UV6 250 aa11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 TRIM73Q86UV7 250 aa11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 PPFIBP1Q86W92 1011 aa11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 ARL8AQ96BM9 186 aa11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 CCT8L2Q96SF2 557 aa11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 OSBPL9Q96SU4 736 aa11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 RUFY1Q96T51 708 aa11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 MMS19Q96T76 1030 aa11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 RIPOR2Q9Y4F9 1068 aa11.27□□□□□ -0.6
PDGFRA-207ENST00000509092 ZMYND10O75800 440 aa11.27□□□□□ -0.61
PDGFRA-207ENST00000509092 PPP1R37O75864 691 aa11.27□□□□□ -0.61
PDGFRA-207ENST00000509092 SYKP43405 635 aa11.27□□□□□ -0.61
PDGFRA-207ENST00000509092 SND1Q7KZF4 910 aaKnown RBP eCLIP11.27□□□□□ -0.61
PDGFRA-207ENST00000509092 MFN1Q8IWA4 741 aa11.27□□□□□ -0.61
PDGFRA-207ENST00000509092 THEMISQ8N1K5 641 aaPredicted RBP11.27□□□□□ -0.61
PDGFRA-207ENST00000509092 TRIM58Q8NG06 486 aa11.27□□□□□ -0.61
PDGFRA-207ENST00000509092 NSMCE1Q8WV22 266 aa11.27□□□□□ -0.61
PDGFRA-207ENST00000509092 CCDC51Q96ER9 411 aa11.27□□□□□ -0.61
PDGFRA-207ENST00000509092 MROH7-TTC4A0A0A0MT08 1334 aa11.27□□□□□ -0.61
PDGFRA-207ENST00000509092 BUB1BO60566 1050 aaPredicted RBP11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 MFAP3LO75121 409 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 GUCY1B3Q02153 619 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 PNOCQ13519 176 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 ANKRD20A8PQ5CZ79 823 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 CCDC181Q5TID7 509 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 USPL1Q5W0Q7 1092 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 CLASRPQ8N2M8 674 aaKnown RBP11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 ACRBPQ8NEB7 543 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 CHCHD3Q9NX63 227 aaKnown RBP11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 A0A0D9SFI3 127 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 A0A1B0GTH6 734 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 HSF2BPO75031 334 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 PPFIA2O75334 1257 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 ATP6V1G2O95670 118 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 ATP1A2P50993 1020 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 PDE4BQ07343 736 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 RBL2Q08999 1139 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 HSP90AA4PQ58FG1 418 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 SPECC1Q5M775 1068 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 THEMIS2Q5TEJ8 643 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 ACSBG1Q96GR2 724 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 RNPC3Q96LT9 517 aaKnown RBP11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 PSMD1Q99460 953 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 C15orf41Q9Y2V0 281 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 NFE2L3Q9Y4A8 694 aa11.26□□□□□ -0.61
PDGFRA-207ENST00000509092 SLIT1O75093 1534 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 ARHGAP23Q9P227 1491 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 H7C1W4 665 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 PSMD14O00487 310 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 DNAJC8O75937 253 aaPredicted RBP11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 ABL1P00519 1130 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 LTKP29376 864 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 HDGFP51858 240 aaKnown RBP11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 LACTB2Q53H82 288 aaPredicted RBP11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 MYSM1Q5VVJ2 828 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 CWF19L1Q69YN2 538 aaKnown RBP11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 CCDC70Q6NSX1 233 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 SLC30A9Q6PML9 568 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 CRELD2Q6UXH1 353 aaPredicted RBP11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 ANKRD23Q86SG2 305 aa11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 NUTM2AQ8IVF1 878 aaPredicted RBP11.25□□□□□ -0.61
PDGFRA-207ENST00000509092 ENOX1Q8TC92 643 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms