RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 C12orf60Q5U649 245 aa10.68□□□□□ -0.7
HTT-205ENST00000509043 FMR1NBQ8N0W7 255 aaPredicted RBP10.68□□□□□ -0.7
HTT-205ENST00000509043 PROM2Q8N271 834 aa10.68□□□□□ -0.7
HTT-205ENST00000509043 NKX2-3Q8TAU0 364 aa10.68□□□□□ -0.7
HTT-205ENST00000509043 TBC1D16Q8TBP0 767 aa10.68□□□□□ -0.7
HTT-205ENST00000509043 NAT10Q9H0A0 1025 aaKnown RBP10.68□□□□□ -0.7
HTT-205ENST00000509043 BRMS1Q9HCU9 246 aa10.68□□□□□ -0.7
HTT-205ENST00000509043 INCENPQ9NQS7 918 aa10.68□□□□□ -0.7
HTT-205ENST00000509043 MCM9Q9NXL9 1143 aa10.68□□□□□ -0.7
HTT-205ENST00000509043 MRVI1Q9Y6F6 885 aa10.68□□□□□ -0.7
HTT-205ENST00000509043 LTBP1Q14766 1721 aa10.67□□□□□ -0.7
HTT-205ENST00000509043 GAKO14976 1311 aa10.67□□□□□ -0.7
HTT-205ENST00000509043 TSPY2A6NKD2 308 aa10.67□□□□□ -0.7
HTT-205ENST00000509043 GOLGA6L6A8MZA4 724 aa10.67□□□□□ -0.7
HTT-205ENST00000509043 POLR3DP05423 398 aaPredicted RBP10.67□□□□□ -0.7
HTT-205ENST00000509043 MSNP26038 577 aaKnown RBP10.67□□□□□ -0.7
HTT-205ENST00000509043 OTUD7BQ6GQQ9 843 aa10.67□□□□□ -0.7
HTT-205ENST00000509043 RAB11FIP4Q86YS3 637 aa10.67□□□□□ -0.7
HTT-205ENST00000509043 CCDC144CPQ8IYA2 1237 aa10.67□□□□□ -0.7
HTT-205ENST00000509043 NUP133Q8WUM0 1156 aa10.67□□□□□ -0.7
HTT-205ENST00000509043 EYA3Q99504 573 aa10.67□□□□□ -0.7
HTT-205ENST00000509043 ZKSCAN3Q9BRR0 538 aa10.67□□□□□ -0.7
HTT-205ENST00000509043 MYL10Q9BUA6 226 aa10.67□□□□□ -0.7
HTT-205ENST00000509043 ANO10Q9NW15 660 aa10.67□□□□□ -0.7
HTT-205ENST00000509043 CLIC4Q9Y696 253 aa10.67□□□□□ -0.7
HTT-205ENST00000509043 KIF28PB7ZC32 967 aa10.66□□□□□ -0.7
HTT-205ENST00000509043 APBA3O96018 575 aa10.66□□□□□ -0.7
HTT-205ENST00000509043 SRGNP10124 158 aa10.66□□□□□ -0.7
HTT-205ENST00000509043 RXRAP19793 462 aa10.66□□□□□ -0.7
HTT-205ENST00000509043 ZRSR1Q15695 479 aaKnown RBP10.66□□□□□ -0.7
HTT-205ENST00000509043 CAMK4Q16566 473 aa10.66□□□□□ -0.7
HTT-205ENST00000509043 AXDND1Q5T1B0 1012 aaPredicted RBP10.66□□□□□ -0.7
HTT-205ENST00000509043 TMTC3Q6ZXV5 915 aa10.66□□□□□ -0.7
HTT-205ENST00000509043 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.66□□□□□ -0.7
HTT-205ENST00000509043 DIS3L2Q8IYB7 885 aaKnown RBP10.66□□□□□ -0.7
HTT-205ENST00000509043 ZNF579Q8NAF0 562 aaKnown RBP10.66□□□□□ -0.7
HTT-205ENST00000509043 MASTLQ96GX5 879 aa10.66□□□□□ -0.7
HTT-205ENST00000509043 LZTS2Q9BRK4 669 aa10.66□□□□□ -0.7
HTT-205ENST00000509043 RTFDC1Q9BY42 306 aaPredicted RBP10.66□□□□□ -0.7
HTT-205ENST00000509043 KAT14Q9H8E8 782 aa10.66□□□□□ -0.7
HTT-205ENST00000509043 HOOK1Q9UJC3 728 aaKnown RBP10.66□□□□□ -0.7
HTT-205ENST00000509043 PARP3Q9Y6F1 533 aa10.66□□□□□ -0.7
HTT-205ENST00000509043 C6orf229H3BNL8 230 aa10.65□□□□□ -0.7
HTT-205ENST00000509043 ADCY5O95622 1261 aa10.65□□□□□ -0.7
HTT-205ENST00000509043 PTMAP06454 111 aaKnown RBP10.65□□□□□ -0.7
HTT-205ENST00000509043 ZNF165P49910 485 aa10.65□□□□□ -0.7
HTT-205ENST00000509043 FUT2Q10981 343 aa10.65□□□□□ -0.7
HTT-205ENST00000509043 PTPAQ15257 358 aa10.65□□□□□ -0.7
HTT-205ENST00000509043 ANO6Q4KMQ2 910 aa10.65□□□□□ -0.7
HTT-205ENST00000509043 PPP4R3BQ5MIZ7 849 aa10.65□□□□□ -0.7
HTT-205ENST00000509043 MFSD14BQ5SR56 506 aa10.65□□□□□ -0.7
HTT-205ENST00000509043 CKAP2LQ8IYA6 745 aa10.65□□□□□ -0.7
HTT-205ENST00000509043 CEP57L1Q8IYX8 460 aa10.65□□□□□ -0.7
HTT-205ENST00000509043 KRI1Q8N9T8 703 aaKnown RBP10.65□□□□□ -0.7
HTT-205ENST00000509043 SH3RF3Q8TEJ3 882 aaPredicted RBP10.65□□□□□ -0.7
HTT-205ENST00000509043 CCDC34Q96HJ3 373 aa10.65□□□□□ -0.7
HTT-205ENST00000509043 AIFM3Q96NN9 605 aa10.65□□□□□ -0.7
HTT-205ENST00000509043 BPIFA3Q9BQP9 254 aa10.65□□□□□ -0.7
HTT-205ENST00000509043 SDF4Q9BRK5 362 aa10.65□□□□□ -0.7
HTT-205ENST00000509043 PHF20Q9BVI0 1012 aa10.65□□□□□ -0.7
HTT-205ENST00000509043 FTOQ9C0B1 505 aaKnown RBP eCLIP10.65□□□□□ -0.7
HTT-205ENST00000509043 ZC3H12CQ9C0D7 883 aaKnown RBP10.65□□□□□ -0.7
HTT-205ENST00000509043 GOLPH3LQ9H4A5 285 aa10.65□□□□□ -0.7
HTT-205ENST00000509043 MKNK2Q9HBH9 465 aa10.65□□□□□ -0.7
HTT-205ENST00000509043 SH3GLB2Q9NR46 395 aa10.65□□□□□ -0.7
HTT-205ENST00000509043 ZKSCAN5Q9Y2L8 839 aa10.65□□□□□ -0.7
HTT-205ENST00000509043 ECM29Q5VYK3 1845 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 CYP2D7A0A087X1C5 515 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 ZNF500O60304 480 aaPredicted RBP10.64□□□□□ -0.71
HTT-205ENST00000509043 PPFIA3O75145 1194 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 CALML3P27482 149 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 SMARCA1P28370 1054 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 RXRBP28702 533 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 KRT2P35908 639 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 BTDP43251 543 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 TRAPPC10P48553 1259 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 FKBP1AP62942 108 aaKnown RBP10.64□□□□□ -0.71
HTT-205ENST00000509043 TPRNQ4KMQ1 711 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 GRIPAP1Q4V328 841 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 RESP18Q5W5W9 173 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 GALNT17Q6IS24 598 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 STYK1Q6J9G0 422 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 C16orf86Q6ZW13 317 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 COL23A1Q86Y22 540 aaPredicted RBP10.64□□□□□ -0.71
HTT-205ENST00000509043 ZNF444Q8N0Y2 327 aaPredicted RBP10.64□□□□□ -0.71
HTT-205ENST00000509043 MPNDQ8N594 471 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 MRIQ9BWK5 157 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 CBX8Q9HC52 389 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 RRAGDQ9NQL2 400 aaPredicted RBP10.64□□□□□ -0.71
HTT-205ENST00000509043 POLLQ9UGP5 575 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 HPSEQ9Y251 543 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 C10orf71Q711Q0 1435 aa10.64□□□□□ -0.71
HTT-205ENST00000509043 MYO3BQ8WXR4 1341 aa10.63□□□□□ -0.71
HTT-205ENST00000509043 BAZ2AQ9UIF9 1905 aaKnown RBP10.63□□□□□ -0.71
HTT-205ENST00000509043 BTBD18B2RXH4 712 aa10.63□□□□□ -0.71
HTT-205ENST00000509043 GOLGA6L19H0YKK7 550 aa10.63□□□□□ -0.71
HTT-205ENST00000509043 PRDM1O75626 825 aa10.63□□□□□ -0.71
HTT-205ENST00000509043 ZNF202O95125 648 aa10.63□□□□□ -0.71
HTT-205ENST00000509043 TSPY3P0CV98 308 aa10.63□□□□□ -0.71
HTT-205ENST00000509043 TSPY8P0CW00 308 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms