RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 FANCGO15287 622 aa4.58□□□□□ -1.68
DEPDC1B-204ENST00000509006 LRIG2O94898 1065 aa4.58□□□□□ -1.68
DEPDC1B-204ENST00000509006 CDC37L1Q7L3B6 337 aa4.58□□□□□ -1.68
DEPDC1B-204ENST00000509006 TTC6Q86TZ1 520 aa4.58□□□□□ -1.68
DEPDC1B-204ENST00000509006 EMILIN2Q9BXX0 1053 aa4.58□□□□□ -1.68
DEPDC1B-204ENST00000509006 NLRP2Q9NX02 1062 aa4.58□□□□□ -1.68
DEPDC1B-204ENST00000509006 GNEQ9Y223 722 aaKnown RBP4.58□□□□□ -1.68
DEPDC1B-204ENST00000509006 AKAP2Q9Y2D5 859 aa4.58□□□□□ -1.68
DEPDC1B-204ENST00000509006 ST14Q9Y5Y6 855 aa4.58□□□□□ -1.68
DEPDC1B-204ENST00000509006 CAPN6Q9Y6Q1 641 aa4.58□□□□□ -1.68
DEPDC1B-204ENST00000509006 DNAJC25-GNG10A0A024R161 153 aa4.57□□□□□ -1.68
DEPDC1B-204ENST00000509006 TREHO43280 583 aa4.57□□□□□ -1.68
DEPDC1B-204ENST00000509006 RAC2P15153 192 aa4.57□□□□□ -1.68
DEPDC1B-204ENST00000509006 BMP6P22004 513 aa4.57□□□□□ -1.68
DEPDC1B-204ENST00000509006 ENOX2Q16206 610 aaKnown RBP4.57□□□□□ -1.68
DEPDC1B-204ENST00000509006 RALGPS1Q5JS13 557 aa4.57□□□□□ -1.68
DEPDC1B-204ENST00000509006 SFRP5Q5T4F7 317 aa4.57□□□□□ -1.68
DEPDC1B-204ENST00000509006 NXPE4Q6UWF7 544 aa4.57□□□□□ -1.68
DEPDC1B-204ENST00000509006 C22orf34Q6ZV56 151 aa4.57□□□□□ -1.68
DEPDC1B-204ENST00000509006 C14orf37Q86TY3 774 aa4.57□□□□□ -1.68
DEPDC1B-204ENST00000509006 KCNN1Q92952 543 aa4.57□□□□□ -1.68
DEPDC1B-204ENST00000509006 CCDC120Q96HB5 630 aa4.57□□□□□ -1.68
DEPDC1B-204ENST00000509006 NECAB3Q96P71 396 aaPredicted RBP4.57□□□□□ -1.68
DEPDC1B-204ENST00000509006 SLC26A8Q96RN1 970 aa4.57□□□□□ -1.68
DEPDC1B-204ENST00000509006 MIPEPQ99797 713 aa4.57□□□□□ -1.68
DEPDC1B-204ENST00000509006 PARD6AQ9NPB6 346 aa4.57□□□□□ -1.68
DEPDC1B-204ENST00000509006 ENC1O14682 589 aa4.56□□□□□ -1.68
DEPDC1B-204ENST00000509006 PAGE1O75459 146 aa4.56□□□□□ -1.68
DEPDC1B-204ENST00000509006 BMP7P18075 431 aa4.56□□□□□ -1.68
DEPDC1B-204ENST00000509006 TRHRP34981 398 aaPredicted RBP4.56□□□□□ -1.68
DEPDC1B-204ENST00000509006 HK2P52789 917 aa4.56□□□□□ -1.68
DEPDC1B-204ENST00000509006 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.56□□□□□ -1.68
DEPDC1B-204ENST00000509006 MYLIPQ8WY64 445 aa4.56□□□□□ -1.68
DEPDC1B-204ENST00000509006 UBE2FQ969M7 185 aa4.56□□□□□ -1.68
DEPDC1B-204ENST00000509006 ZCCHC4Q9H5U6 513 aa4.56□□□□□ -1.68
DEPDC1B-204ENST00000509006 FBRSQ9HAH7 460 aa4.56□□□□□ -1.68
DEPDC1B-204ENST00000509006 PPP4R2Q9NY27 417 aa4.56□□□□□ -1.68
DEPDC1B-204ENST00000509006 DCTN4Q9UJW0 460 aa4.56□□□□□ -1.68
DEPDC1B-204ENST00000509006 PCDHA4Q9UN74 947 aa4.56□□□□□ -1.68
DEPDC1B-204ENST00000509006 PNMA6FA0A0J9YX94 578 aa4.55□□□□□ -1.68
DEPDC1B-204ENST00000509006 PRAMEF27A3QJZ7 478 aa4.55□□□□□ -1.68
DEPDC1B-204ENST00000509006 FOXD2O60548 495 aaPredicted RBP4.55□□□□□ -1.68
DEPDC1B-204ENST00000509006 CBX7O95931 251 aa4.55□□□□□ -1.68
DEPDC1B-204ENST00000509006 RASIP1Q5U651 963 aa4.55□□□□□ -1.68
DEPDC1B-204ENST00000509006 THAP5Q7Z6K1 395 aa4.55□□□□□ -1.68
DEPDC1B-204ENST00000509006 KCT2Q8NC54 265 aa4.55□□□□□ -1.68
DEPDC1B-204ENST00000509006 RIN3Q8TB24 985 aa4.55□□□□□ -1.68
DEPDC1B-204ENST00000509006 ANKRD24Q8TF21 1146 aa4.55□□□□□ -1.68
DEPDC1B-204ENST00000509006 RNF32Q9H0A6 362 aa4.55□□□□□ -1.68
DEPDC1B-204ENST00000509006 ZSWIM5Q9P217 1185 aa4.55□□□□□ -1.68
DEPDC1B-204ENST00000509006 TMEM59LQ9UK28 342 aa4.55□□□□□ -1.68
DEPDC1B-204ENST00000509006 TRIM37O94972 964 aa4.54□□□□□ -1.68
DEPDC1B-204ENST00000509006 SRFP11831 508 aa4.54□□□□□ -1.68
DEPDC1B-204ENST00000509006 KRTAP10-2P60368 255 aa4.54□□□□□ -1.68
DEPDC1B-204ENST00000509006 SLBPQ14493 270 aaKnown RBP eCLIP4.54□□□□□ -1.68
DEPDC1B-204ENST00000509006 NKG7Q16617 165 aa4.54□□□□□ -1.68
DEPDC1B-204ENST00000509006 TPTE2Q6XPS3 522 aa4.54□□□□□ -1.68
DEPDC1B-204ENST00000509006 ZNF507Q8TCN5 953 aa4.54□□□□□ -1.68
DEPDC1B-204ENST00000509006 ELMO3Q96BJ8 720 aa4.54□□□□□ -1.68
DEPDC1B-204ENST00000509006 OSBPL7Q9BZF2 842 aa4.54□□□□□ -1.68
DEPDC1B-204ENST00000509006 MCOLN1Q9GZU1 580 aa4.54□□□□□ -1.68
DEPDC1B-204ENST00000509006 WASH4PA8MWX3 477 aa4.53□□□□□ -1.68
DEPDC1B-204ENST00000509006 FBXO24O75426 580 aa4.53□□□□□ -1.68
DEPDC1B-204ENST00000509006 HPXP02790 462 aa4.53□□□□□ -1.68
DEPDC1B-204ENST00000509006 ESR1P03372 595 aa4.53□□□□□ -1.68
DEPDC1B-204ENST00000509006 PLCB3Q01970 1234 aa4.53□□□□□ -1.68
DEPDC1B-204ENST00000509006 FMR1Q06787 632 aaKnown RBP eCLIP4.53□□□□□ -1.68
DEPDC1B-204ENST00000509006 PDE4CQ08493 712 aa4.53□□□□□ -1.68
DEPDC1B-204ENST00000509006 INPP5AQ14642 412 aa4.53□□□□□ -1.68
DEPDC1B-204ENST00000509006 LLGL2Q6P1M3 1020 aa4.53□□□□□ -1.68
DEPDC1B-204ENST00000509006 LRFN4Q6PJG9 635 aa4.53□□□□□ -1.68
DEPDC1B-204ENST00000509006 ERICH6Q7L0X2 663 aa4.53□□□□□ -1.68
DEPDC1B-204ENST00000509006 FBF1Q8TES7 1133 aa4.53□□□□□ -1.68
DEPDC1B-204ENST00000509006 KCNC2Q96PR1 638 aa4.53□□□□□ -1.68
DEPDC1B-204ENST00000509006 SRCIN1Q9C0H9 1055 aa4.53□□□□□ -1.68
DEPDC1B-204ENST00000509006 PPM1HQ9ULR3 514 aa4.53□□□□□ -1.68
DEPDC1B-204ENST00000509006 MYOCOSA0A1B0GUC4 107 aa4.52□□□□□ -1.69
DEPDC1B-204ENST00000509006 GSTT1P30711 240 aa4.52□□□□□ -1.69
DEPDC1B-204ENST00000509006 DLG4P78352 724 aa4.52□□□□□ -1.69
DEPDC1B-204ENST00000509006 TNK2Q07912 1038 aa4.52□□□□□ -1.69
DEPDC1B-204ENST00000509006 SCARA3Q6AZY7 606 aa4.52□□□□□ -1.69
DEPDC1B-204ENST00000509006 LETMD1Q6P1Q0 360 aa4.52□□□□□ -1.69
DEPDC1B-204ENST00000509006 BAHD1Q8TBE0 780 aaPredicted RBP4.52□□□□□ -1.69
DEPDC1B-204ENST00000509006 XAGE3Q8WTP9 111 aa4.52□□□□□ -1.69
DEPDC1B-204ENST00000509006 ADAMTS10Q9H324 1103 aa4.52□□□□□ -1.69
DEPDC1B-204ENST00000509006 C19orf44Q9H6X5 657 aa4.52□□□□□ -1.69
DEPDC1B-204ENST00000509006 TRIM13O60858 407 aa4.51□□□□□ -1.69
DEPDC1B-204ENST00000509006 SYN1P17600 705 aa4.51□□□□□ -1.69
DEPDC1B-204ENST00000509006 MAPK1P28482 360 aa4.51□□□□□ -1.69
DEPDC1B-204ENST00000509006 NFIXQ14938 502 aa4.51□□□□□ -1.69
DEPDC1B-204ENST00000509006 TIGD5Q53EQ6 642 aa4.51□□□□□ -1.69
DEPDC1B-204ENST00000509006 PRAMEF13Q5VWM6 474 aa4.51□□□□□ -1.69
DEPDC1B-204ENST00000509006 ZNF605Q86T29 641 aa4.51□□□□□ -1.69
DEPDC1B-204ENST00000509006 MFSD2AQ8NA29 543 aa4.51□□□□□ -1.69
DEPDC1B-204ENST00000509006 PLPPR2Q96GM1 343 aa4.51□□□□□ -1.69
DEPDC1B-204ENST00000509006 SETDB2Q96T68 719 aa4.51□□□□□ -1.69
DEPDC1B-204ENST00000509006 ARID3AQ99856 593 aa4.51□□□□□ -1.69
DEPDC1B-204ENST00000509006 SP110Q9HB58 689 aa4.51□□□□□ -1.69
DEPDC1B-204ENST00000509006 BIN2Q9UBW5 565 aaPredicted RBP4.51□□□□□ -1.69
DEPDC1B-204ENST00000509006 BRD1O95696 1058 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms