RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 HOXA7P31268 230 aaPredicted RBP14.68□□□□□ -0.06
CLDND1-218ENST00000508503 HMGCS2P54868 508 aa14.68□□□□□ -0.06
CLDND1-218ENST00000508503 SHROOM1Q2M3G4 852 aaPredicted RBP14.68□□□□□ -0.06
CLDND1-218ENST00000508503 ZNF333Q96JL9 665 aa14.68□□□□□ -0.06
CLDND1-218ENST00000508503 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.68□□□□□ -0.06
CLDND1-218ENST00000508503 DCP1AQ9NPI6 582 aaPredicted RBP14.68□□□□□ -0.06
CLDND1-218ENST00000508503 SRRDQ9UH36 339 aa14.68□□□□□ -0.06
CLDND1-218ENST00000508503 ZBTB21Q9ULJ3 1066 aa14.68□□□□□ -0.06
CLDND1-218ENST00000508503 PDE4DIPQ5VU43 2346 aa14.67□□□□□ -0.06
CLDND1-218ENST00000508503 DDX60LQ5H9U9 1706 aaKnown RBP14.67□□□□□ -0.06
CLDND1-218ENST00000508503 USP17L10C9JJH3 530 aa14.67□□□□□ -0.06
CLDND1-218ENST00000508503 OSBPP22059 807 aa14.67□□□□□ -0.06
CLDND1-218ENST00000508503 HOXD10P28358 340 aa14.67□□□□□ -0.06
CLDND1-218ENST00000508503 SHMT1P34896 483 aa14.67□□□□□ -0.06
CLDND1-218ENST00000508503 SLFNL1Q499Z3 407 aa14.67□□□□□ -0.06
CLDND1-218ENST00000508503 NBPF11Q86T75 865 aa14.67□□□□□ -0.06
CLDND1-218ENST00000508503 LCORLQ8N3X6 602 aa14.67□□□□□ -0.06
CLDND1-218ENST00000508503 TRIM34Q9BYJ4 488 aa14.67□□□□□ -0.06
CLDND1-218ENST00000508503 ATP8A2Q9NTI2 1148 aa14.67□□□□□ -0.06
CLDND1-218ENST00000508503 PNMA3Q9UL41 463 aa14.67□□□□□ -0.06
CLDND1-218ENST00000508503 GDF11O95390 407 aa14.66□□□□□ -0.06
CLDND1-218ENST00000508503 GH2P01242 217 aa14.66□□□□□ -0.06
CLDND1-218ENST00000508503 CHGBP05060 677 aa14.66□□□□□ -0.06
CLDND1-218ENST00000508503 GCLCP48506 637 aaPredicted RBP14.66□□□□□ -0.06
CLDND1-218ENST00000508503 PABPC4Q13310 644 aaKnown RBP eCLIP14.66□□□□□ -0.06
CLDND1-218ENST00000508503 ZSCAN25Q6NSZ9 544 aa14.66□□□□□ -0.06
CLDND1-218ENST00000508503 BCL11AQ9H165 835 aa14.66□□□□□ -0.06
CLDND1-218ENST00000508503 ASCC2Q9H1I8 757 aaPredicted RBP14.66□□□□□ -0.06
CLDND1-218ENST00000508503 ARMT1Q9H993 441 aa14.66□□□□□ -0.06
CLDND1-218ENST00000508503 MGAMO43451 1857 aa14.65□□□□□ -0.06
CLDND1-218ENST00000508503 RBBP6Q7Z6E9 1792 aaKnown RBP14.65□□□□□ -0.06
CLDND1-218ENST00000508503 MYH7P12883 1935 aa14.65□□□□□ -0.06
CLDND1-218ENST00000508503 POTEFA5A3E0 1075 aa14.65□□□□□ -0.06
CLDND1-218ENST00000508503 FMNL1O95466 1100 aaPredicted RBP14.65□□□□□ -0.06
CLDND1-218ENST00000508503 POLR3DP05423 398 aaPredicted RBP14.65□□□□□ -0.06
CLDND1-218ENST00000508503 MTMR2Q13614 643 aa14.65□□□□□ -0.06
CLDND1-218ENST00000508503 AAMPQ13685 434 aa14.65□□□□□ -0.06
CLDND1-218ENST00000508503 SLC4A8Q2Y0W8 1093 aa14.65□□□□□ -0.06
CLDND1-218ENST00000508503 CERKLQ49MI3 558 aaPredicted RBP14.65□□□□□ -0.06
CLDND1-218ENST00000508503 SLC9C1Q4G0N8 1177 aa14.65□□□□□ -0.06
CLDND1-218ENST00000508503 KBTBD3Q8NAB2 608 aa14.65□□□□□ -0.06
CLDND1-218ENST00000508503 SDR42E1Q8WUS8 393 aa14.65□□□□□ -0.06
CLDND1-218ENST00000508503 CRBNQ96SW2 442 aa14.65□□□□□ -0.06
CLDND1-218ENST00000508503 EMILIN3Q9NT22 766 aa14.65□□□□□ -0.06
CLDND1-218ENST00000508503 MCM9Q9NXL9 1143 aa14.65□□□□□ -0.06
CLDND1-218ENST00000508503 TTC41PQ6P2S7 1318 aa14.65□□□□□ -0.06
CLDND1-218ENST00000508503 DOCK3Q8IZD9 2030 aa14.65□□□□□ -0.06
CLDND1-218ENST00000508503 PRKAB2O43741 272 aa14.64□□□□□ -0.07
CLDND1-218ENST00000508503 MBD4O95243 580 aa14.64□□□□□ -0.07
CLDND1-218ENST00000508503 GUCY1A2P33402 732 aa14.64□□□□□ -0.07
CLDND1-218ENST00000508503 FCGRTP55899 365 aa14.64□□□□□ -0.07
CLDND1-218ENST00000508503 EVX2Q03828 476 aa14.64□□□□□ -0.07
CLDND1-218ENST00000508503 HDAC1Q13547 482 aaPredicted RBP14.64□□□□□ -0.07
CLDND1-218ENST00000508503 FAM110CQ1W6H9 321 aa14.64□□□□□ -0.07
CLDND1-218ENST00000508503 SMCR8Q8TEV9 937 aaPredicted RBP14.64□□□□□ -0.07
CLDND1-218ENST00000508503 C12orf42Q96LP6 360 aa14.64□□□□□ -0.07
CLDND1-218ENST00000508503 PUS7LQ9H0K6 701 aaKnown RBP14.64□□□□□ -0.07
CLDND1-218ENST00000508503 MORF4L1Q9UBU8 362 aa14.64□□□□□ -0.07
CLDND1-218ENST00000508503 ABCB5Q2M3G0 1257 aa14.63□□□□□ -0.07
CLDND1-218ENST00000508503 C12orf60Q5U649 245 aa14.63□□□□□ -0.07
CLDND1-218ENST00000508503 USP17L2Q6R6M4 530 aa14.63□□□□□ -0.07
CLDND1-218ENST00000508503 PI4K2BQ8TCG2 481 aa14.63□□□□□ -0.07
CLDND1-218ENST00000508503 GPATCH3Q96I76 525 aa14.63□□□□□ -0.07
CLDND1-218ENST00000508503 STRBPQ96SI9 672 aaKnown RBP14.63□□□□□ -0.07
CLDND1-218ENST00000508503 P2RX7Q99572 595 aaKnown RBP14.63□□□□□ -0.07
CLDND1-218ENST00000508503 KIAA1683Q9H0B3 1180 aa14.63□□□□□ -0.07
CLDND1-218ENST00000508503 TMOD4Q9NZQ9 345 aa14.63□□□□□ -0.07
CLDND1-218ENST00000508503 SALL3Q9BXA9 1300 aa14.63□□□□□ -0.07
CLDND1-218ENST00000508503 ZFYP08048 801 aaPredicted RBP14.62□□□□□ -0.07
CLDND1-218ENST00000508503 CYP2D6P10635 497 aa14.62□□□□□ -0.07
CLDND1-218ENST00000508503 IRF5Q13568 498 aa14.62□□□□□ -0.07
CLDND1-218ENST00000508503 POTEEQ6S8J3 1075 aa14.62□□□□□ -0.07
CLDND1-218ENST00000508503 ANKRD13CQ8N6S4 541 aa14.62□□□□□ -0.07
CLDND1-218ENST00000508503 NAV1Q8NEY1 1877 aa14.62□□□□□ -0.07
CLDND1-218ENST00000508503 SH3TC2Q8TF17 1288 aa14.62□□□□□ -0.07
CLDND1-218ENST00000508503 YTHDC1Q96MU7 727 aaKnown RBP14.62□□□□□ -0.07
CLDND1-218ENST00000508503 CABP5Q9NP86 173 aa14.62□□□□□ -0.07
CLDND1-218ENST00000508503 SWAP70Q9UH65 585 aa14.62□□□□□ -0.07
CLDND1-218ENST00000508503 GABRQQ9UN88 632 aa14.62□□□□□ -0.07
CLDND1-218ENST00000508503 MYPNQ86TC9 1320 aa14.62□□□□□ -0.07
CLDND1-218ENST00000508503 USP17L12C9JPN9 530 aa14.61□□□□□ -0.07
CLDND1-218ENST00000508503 USP17L21D6R901 530 aa14.61□□□□□ -0.07
CLDND1-218ENST00000508503 GRK4P32298 578 aa14.61□□□□□ -0.07
CLDND1-218ENST00000508503 PRKCZQ05513 592 aa14.61□□□□□ -0.07
CLDND1-218ENST00000508503 TSHZ3Q63HK5 1081 aa14.61□□□□□ -0.07
CLDND1-218ENST00000508503 GIMAP6Q6P9H5 292 aa14.61□□□□□ -0.07
CLDND1-218ENST00000508503 SIAH1Q8IUQ4 282 aa14.61□□□□□ -0.07
CLDND1-218ENST00000508503 ACER1Q8TDN7 264 aa14.61□□□□□ -0.07
CLDND1-218ENST00000508503 OTUD7AQ8TE49 926 aaPredicted RBP14.61□□□□□ -0.07
CLDND1-218ENST00000508503 PXYLP1Q8TE99 480 aa14.61□□□□□ -0.07
CLDND1-218ENST00000508503 OSBP2Q969R2 916 aa14.61□□□□□ -0.07
CLDND1-218ENST00000508503 GCC1Q96CN9 775 aa14.61□□□□□ -0.07
CLDND1-218ENST00000508503 TMEM106CQ9BVX2 250 aa14.61□□□□□ -0.07
CLDND1-218ENST00000508503 RBPJLQ9UBG7 517 aa14.61□□□□□ -0.07
CLDND1-218ENST00000508503 GJD2Q9UKL4 321 aa14.61□□□□□ -0.07
CLDND1-218ENST00000508503 BAZ2AQ9UIF9 1905 aaKnown RBP14.6□□□□□ -0.07
CLDND1-218ENST00000508503 GSG1L2A8MUP6 293 aa14.6□□□□□ -0.07
CLDND1-218ENST00000508503 SMIM22K7EJ46 135 aa14.6□□□□□ -0.07
CLDND1-218ENST00000508503 ERC2O15083 957 aa14.6□□□□□ -0.07
CLDND1-218ENST00000508503 RNF113AO15541 343 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms