RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 PLCD1P51178 756 aa10.26□□□□□ -0.77
USP46-207ENST00000508499 CACNB3P54284 484 aa10.26□□□□□ -0.77
USP46-207ENST00000508499 PICALMQ13492 652 aa10.26□□□□□ -0.77
USP46-207ENST00000508499 KRT32Q14532 448 aa10.26□□□□□ -0.77
USP46-207ENST00000508499 SUPT20HL1Q3ZLR7 823 aa10.26□□□□□ -0.77
USP46-207ENST00000508499 CREB3L3Q68CJ9 461 aa10.26□□□□□ -0.77
USP46-207ENST00000508499 KRT26Q7Z3Y9 468 aa10.26□□□□□ -0.77
USP46-207ENST00000508499 ZFPM1Q8IX07 1006 aa10.26□□□□□ -0.77
USP46-207ENST00000508499 TM6SF1Q9BZW5 370 aa10.26□□□□□ -0.77
USP46-207ENST00000508499 NBPF3Q9H094 633 aa10.26□□□□□ -0.77
USP46-207ENST00000508499 RNF41Q9H4P4 317 aaPredicted RBP10.26□□□□□ -0.77
USP46-207ENST00000508499 CNNM2Q9H8M5 875 aa10.26□□□□□ -0.77
USP46-207ENST00000508499 PALD1Q9ULE6 856 aa10.26□□□□□ -0.77
USP46-207ENST00000508499 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.26□□□□□ -0.77
USP46-207ENST00000508499 PHIPQ8WWQ0 1821 aa10.26□□□□□ -0.77
USP46-207ENST00000508499 WDR19Q8NEZ3 1342 aa10.25□□□□□ -0.77
USP46-207ENST00000508499 POLR3DP05423 398 aaPredicted RBP10.25□□□□□ -0.77
USP46-207ENST00000508499 PDE4BQ07343 736 aa10.25□□□□□ -0.77
USP46-207ENST00000508499 TCP10Q12799 353 aa10.25□□□□□ -0.77
USP46-207ENST00000508499 MAP3K11Q16584 847 aa10.25□□□□□ -0.77
USP46-207ENST00000508499 AKNAD1Q5T1N1 836 aa10.25□□□□□ -0.77
USP46-207ENST00000508499 FBXL16Q8N461 479 aa10.25□□□□□ -0.77
USP46-207ENST00000508499 TBC1D32Q96NH3 1257 aa10.25□□□□□ -0.77
USP46-207ENST00000508499 CSRNP1Q96S65 589 aa10.25□□□□□ -0.77
USP46-207ENST00000508499 TMEM106CQ9BVX2 250 aa10.25□□□□□ -0.77
USP46-207ENST00000508499 TMEM39BQ9GZU3 492 aa10.25□□□□□ -0.77
USP46-207ENST00000508499 ZNF112Q9UJU3 913 aa10.25□□□□□ -0.77
USP46-207ENST00000508499 TOMM70O94826 608 aa10.24□□□□□ -0.77
USP46-207ENST00000508499 ITGBL1O95965 494 aaPredicted RBP10.24□□□□□ -0.77
USP46-207ENST00000508499 HMGB1P09429 215 aaKnown RBP10.24□□□□□ -0.77
USP46-207ENST00000508499 YY1P25490 414 aa10.24□□□□□ -0.77
USP46-207ENST00000508499 FKBP1BP68106 108 aa10.24□□□□□ -0.77
USP46-207ENST00000508499 EAPPQ56P03 285 aaPredicted RBP10.24□□□□□ -0.77
USP46-207ENST00000508499 DCAF15Q66K64 600 aa10.24□□□□□ -0.77
USP46-207ENST00000508499 IFNL1Q8IU54 200 aa10.24□□□□□ -0.77
USP46-207ENST00000508499 RBM46Q8TBY0 533 aaKnown RBP10.24□□□□□ -0.77
USP46-207ENST00000508499 CCDC17Q96LX7 622 aa10.24□□□□□ -0.77
USP46-207ENST00000508499 DNAJC18Q9H819 358 aa10.24□□□□□ -0.77
USP46-207ENST00000508499 MYH4Q9Y623 1939 aa10.24□□□□□ -0.77
USP46-207ENST00000508499 E7EWF7 191 aa10.24□□□□□ -0.77
USP46-207ENST00000508499 SHMT1P34896 483 aa10.24□□□□□ -0.77
USP46-207ENST00000508499 NOVP48745 357 aa10.24□□□□□ -0.77
USP46-207ENST00000508499 MFSD6Q6ZSS7 791 aa10.24□□□□□ -0.77
USP46-207ENST00000508499 ZNF784Q8NCA9 323 aaPredicted RBP10.24□□□□□ -0.77
USP46-207ENST00000508499 C22orf23Q9BZE7 217 aa10.24□□□□□ -0.77
USP46-207ENST00000508499 KRT23Q9C075 422 aa10.24□□□□□ -0.77
USP46-207ENST00000508499 TCP11L1Q9NUJ3 509 aa10.24□□□□□ -0.77
USP46-207ENST00000508499 PTPRFP10586 1907 aa10.23□□□□□ -0.77
USP46-207ENST00000508499 PASKQ96RG2 1323 aa10.23□□□□□ -0.77
USP46-207ENST00000508499 PHF20L1A8MW92 1017 aa10.23□□□□□ -0.77
USP46-207ENST00000508499 MINDY4BA8MYZ0 360 aa10.23□□□□□ -0.77
USP46-207ENST00000508499 CTNND1O60716 968 aaKnown RBP10.23□□□□□ -0.77
USP46-207ENST00000508499 PSMA5P28066 241 aa10.23□□□□□ -0.77
USP46-207ENST00000508499 NF2P35240 595 aa10.23□□□□□ -0.77
USP46-207ENST00000508499 CDK8P49336 464 aa10.23□□□□□ -0.77
USP46-207ENST00000508499 FSTL1Q12841 308 aa10.23□□□□□ -0.77
USP46-207ENST00000508499 NBPF12Q5TAG4 269 aaPredicted RBP10.23□□□□□ -0.77
USP46-207ENST00000508499 TBC1D10CQ8IV04 446 aa10.23□□□□□ -0.77
USP46-207ENST00000508499 ZSCAN29Q8IWY8 852 aaPredicted RBP10.23□□□□□ -0.77
USP46-207ENST00000508499 SMC1BQ8NDV3 1235 aa10.23□□□□□ -0.77
USP46-207ENST00000508499 NCOA7Q8NI08 942 aa10.23□□□□□ -0.77
USP46-207ENST00000508499 KLRG1Q96E93 195 aa10.23□□□□□ -0.77
USP46-207ENST00000508499 CDCA5Q96FF9 252 aa10.23□□□□□ -0.77
USP46-207ENST00000508499 ALDH8A1Q9H2A2 487 aaPredicted RBP10.23□□□□□ -0.77
USP46-207ENST00000508499 SAP30BPQ9UHR5 308 aaKnown RBP10.23□□□□□ -0.77
USP46-207ENST00000508499 SYNPO2Q9UMS6 1093 aa10.23□□□□□ -0.77
USP46-207ENST00000508499 SNX14Q9Y5W7 946 aa10.23□□□□□ -0.77
USP46-207ENST00000508499 CYP2D7A0A087X1C5 515 aa10.22□□□□□ -0.77
USP46-207ENST00000508499 CYP2D6P10635 497 aa10.22□□□□□ -0.77
USP46-207ENST00000508499 RASA1P20936 1047 aa10.22□□□□□ -0.77
USP46-207ENST00000508499 TRDNQ13061 729 aa10.22□□□□□ -0.77
USP46-207ENST00000508499 PPP4R3BQ5MIZ7 849 aa10.22□□□□□ -0.77
USP46-207ENST00000508499 NOL9Q5SY16 702 aaKnown RBP10.22□□□□□ -0.77
USP46-207ENST00000508499 MAP1SQ66K74 1059 aaPredicted RBP10.22□□□□□ -0.77
USP46-207ENST00000508499 STOX1Q6ZVD7 989 aa10.22□□□□□ -0.77
USP46-207ENST00000508499 MB21D2Q8IYB1 491 aaPredicted RBP10.22□□□□□ -0.77
USP46-207ENST00000508499 CRACR2BQ8N4Y2 399 aaPredicted RBP10.22□□□□□ -0.77
USP46-207ENST00000508499 ESR2Q92731 530 aa10.22□□□□□ -0.77
USP46-207ENST00000508499 MARVELD3Q96A59 401 aa10.22□□□□□ -0.77
USP46-207ENST00000508499 KIF2CQ99661 725 aa10.22□□□□□ -0.77
USP46-207ENST00000508499 ZNF341Q9BYN7 854 aa10.22□□□□□ -0.77
USP46-207ENST00000508499 AGXT2Q9BYV1 514 aa10.22□□□□□ -0.77
USP46-207ENST00000508499 TBC1D2Q9BYX2 928 aa10.22□□□□□ -0.77
USP46-207ENST00000508499 GLIS2Q9BZE0 524 aaPredicted RBP10.22□□□□□ -0.77
USP46-207ENST00000508499 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.22□□□□□ -0.77
USP46-207ENST00000508499 ZSWIM6Q9HCJ5 1215 aa10.22□□□□□ -0.77
USP46-207ENST00000508499 NEDD4P46934 1319 aa10.21□□□□□ -0.77
USP46-207ENST00000508499 IGKV6D-41A0A0C4DH26 115 aa10.21□□□□□ -0.78
USP46-207ENST00000508499 ADM5C9JUS6 153 aa10.21□□□□□ -0.78
USP46-207ENST00000508499 PPP1R12BO60237 982 aaPredicted RBP10.21□□□□□ -0.78
USP46-207ENST00000508499 CAP2P40123 477 aa10.21□□□□□ -0.78
USP46-207ENST00000508499 HAND2P61296 217 aa10.21□□□□□ -0.78
USP46-207ENST00000508499 CTDSPL2Q05D32 466 aa10.21□□□□□ -0.78
USP46-207ENST00000508499 CCDC178Q5BJE1 867 aa10.21□□□□□ -0.78
USP46-207ENST00000508499 USP48Q86UV5 1035 aa10.21□□□□□ -0.78
USP46-207ENST00000508499 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.21□□□□□ -0.78
USP46-207ENST00000508499 NEDD1Q8NHV4 660 aa10.21□□□□□ -0.78
USP46-207ENST00000508499 ANKS1AQ92625 1134 aa10.21□□□□□ -0.78
USP46-207ENST00000508499 NEK1Q96PY6 1258 aa10.21□□□□□ -0.78
USP46-207ENST00000508499 OCEL1Q9H607 264 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms