RNA–Protein interactions for RNA: ENST00000508454.1

USO1-202, Transcript of USO1 vesicle transport factor, humanhuman

TSL 3

Gene USO1, Length 365 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-202ENST00000508454 PCDHB5Q9Y5E4 795 aa7.47□□□□□ -1.21
USO1-202ENST00000508454 ZNF865P0CJ78 1059 aaPredicted RBP7.46□□□□□ -1.22
USO1-202ENST00000508454 CLCN7P51798 805 aa7.46□□□□□ -1.22
USO1-202ENST00000508454 ZP2Q05996 745 aa7.46□□□□□ -1.22
USO1-202ENST00000508454 IKZF1Q13422 519 aa7.46□□□□□ -1.22
USO1-202ENST00000508454 SEPT6Q14141 434 aa7.46□□□□□ -1.22
USO1-202ENST00000508454 LCE1DQ5T752 114 aa7.46□□□□□ -1.22
USO1-202ENST00000508454 CDC37L1Q7L3B6 337 aa7.46□□□□□ -1.22
USO1-202ENST00000508454 KCT2Q8NC54 265 aa7.46□□□□□ -1.22
USO1-202ENST00000508454 FOXQ1Q9C009 403 aa7.46□□□□□ -1.22
USO1-202ENST00000508454 C19orf73Q9NVV2 129 aa7.46□□□□□ -1.22
USO1-202ENST00000508454 TTF2Q9UNY4 1162 aaKnown RBP7.46□□□□□ -1.22
USO1-202ENST00000508454 CTNND2Q9UQB3 1225 aa7.46□□□□□ -1.22
USO1-202ENST00000508454 ZNF503-AS2A6NEH8 195 aa7.45□□□□□ -1.22
USO1-202ENST00000508454 ZNF16P17020 682 aaPredicted RBP7.45□□□□□ -1.22
USO1-202ENST00000508454 ZNF124Q15973 351 aa7.45□□□□□ -1.22
USO1-202ENST00000508454 TMEM40Q8WWA1 233 aa7.45□□□□□ -1.22
USO1-202ENST00000508454 HSPA12BQ96MM6 686 aa7.45□□□□□ -1.22
USO1-202ENST00000508454 MIPEPQ99797 713 aa7.45□□□□□ -1.22
USO1-202ENST00000508454 ST14Q9Y5Y6 855 aa7.45□□□□□ -1.22
USO1-202ENST00000508454 PRPF40AO75400 957 aaKnown RBP7.44□□□□□ -1.22
USO1-202ENST00000508454 RPS26P62854 115 aaKnown RBP7.44□□□□□ -1.22
USO1-202ENST00000508454 MESP2Q0VG99 397 aa7.44□□□□□ -1.22
USO1-202ENST00000508454 PRAMEF13Q5VWM6 474 aa7.44□□□□□ -1.22
USO1-202ENST00000508454 FYB2Q5VWT5 728 aa7.44□□□□□ -1.22
USO1-202ENST00000508454 HDXQ7Z353 690 aa7.44□□□□□ -1.22
USO1-202ENST00000508454 FRMD6Q96NE9 622 aa7.44□□□□□ -1.22
USO1-202ENST00000508454 ATP13A1Q9HD20 1204 aa7.44□□□□□ -1.22
USO1-202ENST00000508454 SNCAIPQ9Y6H5 919 aa7.44□□□□□ -1.22
USO1-202ENST00000508454 CAPN6Q9Y6Q1 641 aa7.44□□□□□ -1.22
USO1-202ENST00000508454 GNAT3A8MTJ3 354 aa7.43□□□□□ -1.22
USO1-202ENST00000508454 EIF4BP23588 611 aaKnown RBP7.43□□□□□ -1.22
USO1-202ENST00000508454 GRK4P32298 578 aa7.43□□□□□ -1.22
USO1-202ENST00000508454 AGMOQ6ZNB7 445 aa7.43□□□□□ -1.22
USO1-202ENST00000508454 DUSP9Q99956 384 aaKnown RBP7.43□□□□□ -1.22
USO1-202ENST00000508454 AK5Q9Y6K8 562 aa7.43□□□□□ -1.22
USO1-202ENST00000508454 CST3P01034 146 aaPredicted RBP7.42□□□□□ -1.22
USO1-202ENST00000508454 FGD1P98174 961 aa7.42□□□□□ -1.22
USO1-202ENST00000508454 CCDC85BQ15834 202 aaPredicted RBP7.42□□□□□ -1.22
USO1-202ENST00000508454 LCE4AQ5TA78 99 aa7.42□□□□□ -1.22
USO1-202ENST00000508454 MEI1Q5TIA1 1274 aa7.42□□□□□ -1.22
USO1-202ENST00000508454 LETMD1Q6P1Q0 360 aa7.42□□□□□ -1.22
USO1-202ENST00000508454 ZSWIM9Q86XI8 627 aa7.42□□□□□ -1.22
USO1-202ENST00000508454 CILP2Q8IUL8 1156 aa7.42□□□□□ -1.22
USO1-202ENST00000508454 HID1Q8IV36 788 aa7.42□□□□□ -1.22
USO1-202ENST00000508454 MFSD4AQ8N468 514 aa7.42□□□□□ -1.22
USO1-202ENST00000508454 CARS2Q9HA77 564 aaKnown RBP7.42□□□□□ -1.22
USO1-202ENST00000508454 LMCD1Q9NZU5 365 aa7.42□□□□□ -1.22
USO1-202ENST00000508454 TFE3P19532 575 aaPredicted RBP7.41□□□□□ -1.22
USO1-202ENST00000508454 LIG3P49916 1009 aa7.41□□□□□ -1.22
USO1-202ENST00000508454 ETF1P62495 437 aaKnown RBP7.41□□□□□ -1.22
USO1-202ENST00000508454 SFRP5Q5T4F7 317 aa7.41□□□□□ -1.22
USO1-202ENST00000508454 NPAS4Q8IUM7 802 aa7.41□□□□□ -1.22
USO1-202ENST00000508454 MFSD2AQ8NA29 543 aa7.41□□□□□ -1.22
USO1-202ENST00000508454 TJP2Q9UDY2 1190 aa7.41□□□□□ -1.22
USO1-202ENST00000508454 H3BS24 57 aa7.4□□□□□ -1.22
USO1-202ENST00000508454 ERCC3P19447 782 aa7.4□□□□□ -1.22
USO1-202ENST00000508454 MAP3K11Q16584 847 aa7.4□□□□□ -1.22
USO1-202ENST00000508454 XAGE3Q8WTP9 111 aa7.4□□□□□ -1.22
USO1-202ENST00000508454 DPH2Q9BQC3 489 aaPredicted RBP7.4□□□□□ -1.22
USO1-202ENST00000508454 BCL2L13Q9BXK5 485 aa7.4□□□□□ -1.22
USO1-202ENST00000508454 TPX2Q9ULW0 747 aaKnown RBP7.4□□□□□ -1.22
USO1-202ENST00000508454 ANKRD33BA6NCL7 494 aa7.39□□□□□ -1.23
USO1-202ENST00000508454 FARP2O94887 1054 aaPredicted RBP7.39□□□□□ -1.23
USO1-202ENST00000508454 CTSHP09668 335 aa7.39□□□□□ -1.23
USO1-202ENST00000508454 CDKAL1Q5VV42 579 aa7.39□□□□□ -1.23
USO1-202ENST00000508454 MRPL41Q8IXM3 137 aaKnown RBP7.39□□□□□ -1.23
USO1-202ENST00000508454 GIPC2Q8TF65 315 aa7.39□□□□□ -1.23
USO1-202ENST00000508454 LIN37Q96GY3 246 aaPredicted RBP7.39□□□□□ -1.23
USO1-202ENST00000508454 KRTAP4-7Q9BYR0 210 aa7.39□□□□□ -1.23
USO1-202ENST00000508454 TNK2Q07912 1038 aa7.38□□□□□ -1.23
USO1-202ENST00000508454 DNAJB8Q8NHS0 232 aa7.38□□□□□ -1.23
USO1-202ENST00000508454 TLR6Q9Y2C9 796 aa7.38□□□□□ -1.23
USO1-202ENST00000508454 TACC3Q9Y6A5 838 aa7.38□□□□□ -1.23
USO1-202ENST00000508454 FAM155AB1AL88 458 aaPredicted RBP7.37□□□□□ -1.23
USO1-202ENST00000508454 KCNMB1Q16558 191 aa7.37□□□□□ -1.23
USO1-202ENST00000508454 CDH24Q86UP0 819 aa7.37□□□□□ -1.23
USO1-202ENST00000508454 Q96M66 194 aa7.37□□□□□ -1.23
USO1-202ENST00000508454 PUS7Q96PZ0 661 aaKnown RBP7.37□□□□□ -1.23
USO1-202ENST00000508454 WASH4PA8MWX3 477 aa7.36□□□□□ -1.23
USO1-202ENST00000508454 CBX7O95931 251 aa7.36□□□□□ -1.23
USO1-202ENST00000508454 TCF3P15923 654 aa7.36□□□□□ -1.23
USO1-202ENST00000508454 SPOCD1Q6ZMY3 1216 aa7.36□□□□□ -1.23
USO1-202ENST00000508454 THAP5Q7Z6K1 395 aa7.36□□□□□ -1.23
USO1-202ENST00000508454 PPP1R13LQ8WUF5 828 aa7.36□□□□□ -1.23
USO1-202ENST00000508454 ACSF2Q96CM8 615 aaPredicted RBP7.36□□□□□ -1.23
USO1-202ENST00000508454 TMEM87BQ96K49 555 aa7.36□□□□□ -1.23
USO1-202ENST00000508454 PARP2Q9UGN5 583 aa7.36□□□□□ -1.23
USO1-202ENST00000508454 LRRC10BA6NIK2 292 aa7.35□□□□□ -1.23
USO1-202ENST00000508454 DBX1A6NMT0 343 aa7.35□□□□□ -1.23
USO1-202ENST00000508454 ESR1P03372 595 aa7.35□□□□□ -1.23
USO1-202ENST00000508454 GDNFP39905 211 aa7.35□□□□□ -1.23
USO1-202ENST00000508454 DAB2P98082 770 aa7.35□□□□□ -1.23
USO1-202ENST00000508454 TAGLNQ01995 201 aaKnown RBP7.35□□□□□ -1.23
USO1-202ENST00000508454 MLANAQ16655 118 aa7.35□□□□□ -1.23
USO1-202ENST00000508454 EAPPQ56P03 285 aaPredicted RBP7.35□□□□□ -1.23
USO1-202ENST00000508454 PHC3Q8NDX5 983 aa7.35□□□□□ -1.23
USO1-202ENST00000508454 CORINQ9Y5Q5 1042 aa7.35□□□□□ -1.23
USO1-202ENST00000508454 KRT1P04264 644 aa7.34□□□□□ -1.23
USO1-202ENST00000508454 PGRP06401 933 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms