RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 TNPO2O14787 897 aaKnown RBP15.84■□□□□ 0.13
HMGCS1-205ENST00000508319 HLA-DOAP06340 250 aa15.84■□□□□ 0.13
HMGCS1-205ENST00000508319 MAP3K12Q12852 859 aa15.84■□□□□ 0.13
HMGCS1-205ENST00000508319 TMED8Q6PL24 325 aaPredicted RBP15.84■□□□□ 0.13
HMGCS1-205ENST00000508319 FOXP4Q8IVH2 680 aaPredicted RBP15.84■□□□□ 0.13
HMGCS1-205ENST00000508319 SLAIN1Q8ND83 568 aa15.84■□□□□ 0.13
HMGCS1-205ENST00000508319 KIF1BPQ96EK5 621 aa15.84■□□□□ 0.13
HMGCS1-205ENST00000508319 TRIM34Q9BYJ4 488 aa15.84■□□□□ 0.13
HMGCS1-205ENST00000508319 ASCC2Q9H1I8 757 aaPredicted RBP15.84■□□□□ 0.13
HMGCS1-205ENST00000508319 RCAN3Q9UKA8 241 aa15.84■□□□□ 0.13
HMGCS1-205ENST00000508319 ZBTB21Q9ULJ3 1066 aa15.84■□□□□ 0.13
HMGCS1-205ENST00000508319 APBB1O00213 710 aa15.83■□□□□ 0.12
HMGCS1-205ENST00000508319 HMMRO75330 724 aa15.83■□□□□ 0.12
HMGCS1-205ENST00000508319 FLT3LGP49771 235 aa15.83■□□□□ 0.12
HMGCS1-205ENST00000508319 BACE1P56817 501 aa15.83■□□□□ 0.12
HMGCS1-205ENST00000508319 CLASRPQ8N2M8 674 aaKnown RBP15.83■□□□□ 0.12
HMGCS1-205ENST00000508319 RIOK1Q9BRS2 568 aaKnown RBP15.83■□□□□ 0.12
HMGCS1-205ENST00000508319 GINM1Q9NU53 330 aa15.83■□□□□ 0.12
HMGCS1-205ENST00000508319 PLXNB2O15031 1838 aa15.82■□□□□ 0.12
HMGCS1-205ENST00000508319 CCL5P13501 91 aa15.82■□□□□ 0.12
HMGCS1-205ENST00000508319 USP5P45974 858 aa15.82■□□□□ 0.12
HMGCS1-205ENST00000508319 GCLCP48506 637 aaPredicted RBP15.82■□□□□ 0.12
HMGCS1-205ENST00000508319 PABPC4Q13310 644 aaKnown RBP eCLIP15.82■□□□□ 0.12
HMGCS1-205ENST00000508319 IRF5Q13568 498 aa15.82■□□□□ 0.12
HMGCS1-205ENST00000508319 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.82■□□□□ 0.12
HMGCS1-205ENST00000508319 EHD4Q9H223 541 aa15.82■□□□□ 0.12
HMGCS1-205ENST00000508319 ADCY3O60266 1144 aa15.81■□□□□ 0.12
HMGCS1-205ENST00000508319 ELNP15502 786 aa15.81■□□□□ 0.12
HMGCS1-205ENST00000508319 PDE6AP16499 860 aa15.81■□□□□ 0.12
HMGCS1-205ENST00000508319 TTF1Q15361 905 aaPredicted RBP15.81■□□□□ 0.12
HMGCS1-205ENST00000508319 TATDN1Q6P1N9 297 aa15.81■□□□□ 0.12
HMGCS1-205ENST00000508319 PXYLP1Q8TE99 480 aa15.81■□□□□ 0.12
HMGCS1-205ENST00000508319 MYH7P12883 1935 aa15.8■□□□□ 0.12
HMGCS1-205ENST00000508319 C19orf81C9J6K1 198 aa15.8■□□□□ 0.12
HMGCS1-205ENST00000508319 USP17L10C9JJH3 530 aa15.8■□□□□ 0.12
HMGCS1-205ENST00000508319 RAB11FIP3O75154 756 aa15.8■□□□□ 0.12
HMGCS1-205ENST00000508319 GH2P01242 217 aa15.8■□□□□ 0.12
HMGCS1-205ENST00000508319 GJB1P08034 283 aa15.8■□□□□ 0.12
HMGCS1-205ENST00000508319 IFIT2P09913 472 aaKnown RBP15.8■□□□□ 0.12
HMGCS1-205ENST00000508319 HOXA7P31268 230 aaPredicted RBP15.8■□□□□ 0.12
HMGCS1-205ENST00000508319 GJA8P48165 433 aa15.8■□□□□ 0.12
HMGCS1-205ENST00000508319 UBXN2AP68543 259 aa15.8■□□□□ 0.12
HMGCS1-205ENST00000508319 C20orf194Q5TEA3 1177 aa15.8■□□□□ 0.12
HMGCS1-205ENST00000508319 DNAJC2Q99543 621 aaKnown RBP15.8■□□□□ 0.12
HMGCS1-205ENST00000508319 RNF208Q9H0X6 261 aa15.8■□□□□ 0.12
HMGCS1-205ENST00000508319 TMOD4Q9NZQ9 345 aa15.8■□□□□ 0.12
HMGCS1-205ENST00000508319 BIN2Q9UBW5 565 aaPredicted RBP15.8■□□□□ 0.12
HMGCS1-205ENST00000508319 SERPINB13Q9UIV8 391 aa15.8■□□□□ 0.12
HMGCS1-205ENST00000508319 RANBP2P49792 3224 aaKnown RBP15.8■□□□□ 0.12
HMGCS1-205ENST00000508319 MAGEB6P1A0A0J9YX57 407 aa15.79■□□□□ 0.12
HMGCS1-205ENST00000508319 TCRBV5S4A2TA0A5A2 114 aa15.79■□□□□ 0.12
HMGCS1-205ENST00000508319 GOLIM4O00461 696 aa15.79■□□□□ 0.12
HMGCS1-205ENST00000508319 INHAP05111 366 aa15.79■□□□□ 0.12
HMGCS1-205ENST00000508319 IRX3P78415 501 aaPredicted RBP15.79■□□□□ 0.12
HMGCS1-205ENST00000508319 SLC9C2Q5TAH2 1124 aa15.79■□□□□ 0.12
HMGCS1-205ENST00000508319 UBE2Q1Q7Z7E8 422 aa15.79■□□□□ 0.12
HMGCS1-205ENST00000508319 NKX2-3Q8TAU0 364 aa15.79■□□□□ 0.12
HMGCS1-205ENST00000508319 COA7Q96BR5 231 aa15.79■□□□□ 0.12
HMGCS1-205ENST00000508319 EDC3Q96F86 508 aaKnown RBP15.79■□□□□ 0.12
HMGCS1-205ENST00000508319 UNC93B1Q9H1C4 597 aa15.79■□□□□ 0.12
HMGCS1-205ENST00000508319 CHMP4BQ9H444 224 aaKnown RBP15.79■□□□□ 0.12
HMGCS1-205ENST00000508319 EMILIN3Q9NT22 766 aa15.79■□□□□ 0.12
HMGCS1-205ENST00000508319 MORF4L1Q9UBU8 362 aa15.79■□□□□ 0.12
HMGCS1-205ENST00000508319 ZNF532Q9HCE3 1301 aa15.78■□□□□ 0.12
HMGCS1-205ENST00000508319 PEX10O60683 326 aa15.78■□□□□ 0.12
HMGCS1-205ENST00000508319 SHMT1P34896 483 aa15.78■□□□□ 0.12
HMGCS1-205ENST00000508319 PLCD1P51178 756 aa15.78■□□□□ 0.12
HMGCS1-205ENST00000508319 TTC6Q86TZ1 520 aa15.78■□□□□ 0.12
HMGCS1-205ENST00000508319 GCC1Q96CN9 775 aa15.78■□□□□ 0.12
HMGCS1-205ENST00000508319 P2RX7Q99572 595 aaKnown RBP15.78■□□□□ 0.12
HMGCS1-205ENST00000508319 MYH8P13535 1937 aa15.78■□□□□ 0.12
HMGCS1-205ENST00000508319 BAZ2AQ9UIF9 1905 aaKnown RBP15.77■□□□□ 0.12
HMGCS1-205ENST00000508319 HERVK_113P62684 666 aa15.77■□□□□ 0.12
HMGCS1-205ENST00000508319 EVX2Q03828 476 aa15.77■□□□□ 0.12
HMGCS1-205ENST00000508319 GABPAQ06546 454 aa15.77■□□□□ 0.12
HMGCS1-205ENST00000508319 PDE3AQ14432 1141 aa15.77■□□□□ 0.12
HMGCS1-205ENST00000508319 LCORLQ8N3X6 602 aa15.77■□□□□ 0.12
HMGCS1-205ENST00000508319 U2AF1L4Q8WU68 220 aaKnown RBP15.77■□□□□ 0.12
HMGCS1-205ENST00000508319 C12orf42Q96LP6 360 aa15.77■□□□□ 0.12
HMGCS1-205ENST00000508319 BCL11AQ9H165 835 aa15.77■□□□□ 0.12
HMGCS1-205ENST00000508319 TXNRD2Q9NNW7 524 aa15.77■□□□□ 0.12
HMGCS1-205ENST00000508319 GJD2Q9UKL4 321 aa15.77■□□□□ 0.12
HMGCS1-205ENST00000508319 TAOK2Q9UL54 1235 aa15.77■□□□□ 0.12
HMGCS1-205ENST00000508319 TRIOBPQ9H2D6 2365 aa15.77■□□□□ 0.11
HMGCS1-205ENST00000508319 ATP5JP18859 108 aa15.76■□□□□ 0.11
HMGCS1-205ENST00000508319 CERKLQ49MI3 558 aaPredicted RBP15.76■□□□□ 0.11
HMGCS1-205ENST00000508319 SDR42E1Q8WUS8 393 aa15.76■□□□□ 0.11
HMGCS1-205ENST00000508319 CRNKL1Q9BZJ0 848 aaKnown RBP15.76■□□□□ 0.11
HMGCS1-205ENST00000508319 BOLA2Q9H3K6 86 aa15.76■□□□□ 0.11
HMGCS1-205ENST00000508319 PAK6Q9NQU5 681 aaPredicted RBP15.76■□□□□ 0.11
HMGCS1-205ENST00000508319 PAG1Q9NWQ8 432 aa15.76■□□□□ 0.11
HMGCS1-205ENST00000508319 POLR3DP05423 398 aaPredicted RBP15.75■□□□□ 0.11
HMGCS1-205ENST00000508319 RAB3GAP1Q15042 981 aa15.75■□□□□ 0.11
HMGCS1-205ENST00000508319 ZYXQ15942 572 aaKnown RBP15.75■□□□□ 0.11
HMGCS1-205ENST00000508319 ABCB5Q2M3G0 1257 aa15.75■□□□□ 0.11
HMGCS1-205ENST00000508319 SLFNL1Q499Z3 407 aa15.75■□□□□ 0.11
HMGCS1-205ENST00000508319 HABP4Q5JVS0 413 aaKnown RBP15.75■□□□□ 0.11
HMGCS1-205ENST00000508319 USP17L2Q6R6M4 530 aa15.75■□□□□ 0.11
HMGCS1-205ENST00000508319 POTEEQ6S8J3 1075 aa15.75■□□□□ 0.11
HMGCS1-205ENST00000508319 FEZ1Q99689 392 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms