RNA–Protein interactions for RNA: ENST00000507968.1

SSBP2-209, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-209ENST00000507968 BRF1Q92994 677 aa12.66□□□□□ -0.38
SSBP2-209ENST00000507968 DCPSQ96C86 337 aaKnown RBP12.66□□□□□ -0.38
SSBP2-209ENST00000507968 TCEANC2Q96MN5 208 aa12.66□□□□□ -0.38
SSBP2-209ENST00000507968 CNTNAP1P78357 1384 aa12.66□□□□□ -0.38
SSBP2-209ENST00000507968 SHMT1P34896 483 aa12.65□□□□□ -0.38
SSBP2-209ENST00000507968 EVX2Q03828 476 aa12.65□□□□□ -0.38
SSBP2-209ENST00000507968 CUL4AQ13619 759 aa12.65□□□□□ -0.38
SSBP2-209ENST00000507968 COL9A3Q14050 684 aaPredicted RBP12.65□□□□□ -0.38
SSBP2-209ENST00000507968 PPP2R5BQ15173 497 aa12.65□□□□□ -0.38
SSBP2-209ENST00000507968 SUPT20HL1Q3ZLR7 823 aa12.65□□□□□ -0.38
SSBP2-209ENST00000507968 CERKLQ49MI3 558 aaPredicted RBP12.65□□□□□ -0.38
SSBP2-209ENST00000507968 FAM47AQ5JRC9 791 aa12.65□□□□□ -0.38
SSBP2-209ENST00000507968 INTS4Q96HW7 963 aaKnown RBP12.65□□□□□ -0.38
SSBP2-209ENST00000507968 LRRC2Q9BYS8 371 aa12.65□□□□□ -0.38
SSBP2-209ENST00000507968 TMEM39BQ9GZU3 492 aa12.65□□□□□ -0.38
SSBP2-209ENST00000507968 TAF1DQ9H5J8 278 aaPredicted RBP12.65□□□□□ -0.38
SSBP2-209ENST00000507968 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.65□□□□□ -0.38
SSBP2-209ENST00000507968 TPCN1Q9ULQ1 816 aa12.65□□□□□ -0.38
SSBP2-209ENST00000507968 MYH2Q9UKX2 1941 aa12.64□□□□□ -0.39
SSBP2-209ENST00000507968 CCDC69A6NI79 296 aa12.64□□□□□ -0.39
SSBP2-209ENST00000507968 DHX16O60231 1041 aaKnown RBP12.64□□□□□ -0.39
SSBP2-209ENST00000507968 HSP90AA1P07900 732 aaKnown RBP12.64□□□□□ -0.39
SSBP2-209ENST00000507968 VEGFAP15692 232 aaPredicted RBP12.64□□□□□ -0.39
SSBP2-209ENST00000507968 RCAN1P53805 252 aa12.64□□□□□ -0.39
SSBP2-209ENST00000507968 SEC23AQ15436 765 aa12.64□□□□□ -0.39
SSBP2-209ENST00000507968 IFIT1BQ5T764 474 aaKnown RBP12.64□□□□□ -0.39
SSBP2-209ENST00000507968 NFXL1Q6ZNB6 911 aa12.64□□□□□ -0.39
SSBP2-209ENST00000507968 SLC44A5Q8NCS7 719 aa12.64□□□□□ -0.39
SSBP2-209ENST00000507968 TEPSINQ96N21 525 aa12.64□□□□□ -0.39
SSBP2-209ENST00000507968 SLKQ9H2G2 1235 aaPredicted RBP12.64□□□□□ -0.39
SSBP2-209ENST00000507968 LY9Q9HBG7 655 aa12.64□□□□□ -0.39
SSBP2-209ENST00000507968 CWC22Q9HCG8 908 aaKnown RBP12.64□□□□□ -0.39
SSBP2-209ENST00000507968 CABP5Q9NP86 173 aa12.64□□□□□ -0.39
SSBP2-209ENST00000507968 GINM1Q9NU53 330 aa12.64□□□□□ -0.39
SSBP2-209ENST00000507968 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.64□□□□□ -0.39
SSBP2-209ENST00000507968 SLC12A7Q9Y666 1083 aa12.64□□□□□ -0.39
SSBP2-209ENST00000507968 TNKSO95271 1327 aa12.63□□□□□ -0.39
SSBP2-209ENST00000507968 PFKFB2O60825 505 aa12.63□□□□□ -0.39
SSBP2-209ENST00000507968 CALM1P0DP23 149 aa12.63□□□□□ -0.39
SSBP2-209ENST00000507968 CALM2P0DP24 149 aa12.63□□□□□ -0.39
SSBP2-209ENST00000507968 CALM3P0DP25 149 aa12.63□□□□□ -0.39
SSBP2-209ENST00000507968 PDIA3P30101 505 aaKnown RBP12.63□□□□□ -0.39
SSBP2-209ENST00000507968 NOVP48745 357 aa12.63□□□□□ -0.39
SSBP2-209ENST00000507968 APOBRQ0VD83 1088 aa12.63□□□□□ -0.39
SSBP2-209ENST00000507968 ME3Q16798 604 aa12.63□□□□□ -0.39
SSBP2-209ENST00000507968 DCAF15Q66K64 600 aa12.63□□□□□ -0.39
SSBP2-209ENST00000507968 CATIPQ7Z7H3 387 aa12.63□□□□□ -0.39
SSBP2-209ENST00000507968 SULF1Q8IWU6 871 aa12.63□□□□□ -0.39
SSBP2-209ENST00000507968 NKX2-3Q8TAU0 364 aa12.63□□□□□ -0.39
SSBP2-209ENST00000507968 ZKSCAN3Q9BRR0 538 aa12.63□□□□□ -0.39
SSBP2-209ENST00000507968 GGA3Q9NZ52 723 aa12.63□□□□□ -0.39
SSBP2-209ENST00000507968 ASTN2O75129 1339 aaPredicted RBP12.62□□□□□ -0.39
SSBP2-209ENST00000507968 PSME4Q14997 1843 aa12.62□□□□□ -0.39
SSBP2-209ENST00000507968 KLF18A0A0U1RQI7 1052 aa12.62□□□□□ -0.39
SSBP2-209ENST00000507968 CCDC196A0A1B0GTZ2 297 aa12.62□□□□□ -0.39
SSBP2-209ENST00000507968 POTECB2RU33 542 aa12.62□□□□□ -0.39
SSBP2-209ENST00000507968 SLC4A3P48751 1232 aa12.62□□□□□ -0.39
SSBP2-209ENST00000507968 ABCB5Q2M3G0 1257 aa12.62□□□□□ -0.39
SSBP2-209ENST00000507968 TMEM179Q6ZVK1 233 aa12.62□□□□□ -0.39
SSBP2-209ENST00000507968 NOL8Q76FK4 1167 aaKnown RBP12.62□□□□□ -0.39
SSBP2-209ENST00000507968 ENAHQ8N8S7 591 aaPredicted RBP12.62□□□□□ -0.39
SSBP2-209ENST00000507968 LARP6Q9BRS8 491 aaKnown RBP12.62□□□□□ -0.39
SSBP2-209ENST00000507968 KANSL2Q9H9L4 492 aa12.62□□□□□ -0.39
SSBP2-209ENST00000507968 GPHNQ9NQX3 736 aaPredicted RBP12.62□□□□□ -0.39
SSBP2-209ENST00000507968 IL17RBQ9NRM6 502 aa12.62□□□□□ -0.39
SSBP2-209ENST00000507968 MTMR4Q9NYA4 1195 aa12.62□□□□□ -0.39
SSBP2-209ENST00000507968 BRPF3Q9ULD4 1205 aa12.62□□□□□ -0.39
SSBP2-209ENST00000507968 ZNF646O15015 1829 aaPredicted RBP12.61□□□□□ -0.39
SSBP2-209ENST00000507968 IGKV6D-41A0A0C4DH26 115 aa12.61□□□□□ -0.39
SSBP2-209ENST00000507968 MPHOSPH10O00566 681 aaKnown RBP12.61□□□□□ -0.39
SSBP2-209ENST00000507968 ZBTB43O43298 467 aa12.61□□□□□ -0.39
SSBP2-209ENST00000507968 AKR1B1P15121 316 aa12.61□□□□□ -0.39
SSBP2-209ENST00000507968 CPLX2Q6PUV4 134 aaKnown RBP12.61□□□□□ -0.39
SSBP2-209ENST00000507968 CDC37L1Q7L3B6 337 aa12.61□□□□□ -0.39
SSBP2-209ENST00000507968 MIGA2Q7L4E1 593 aa12.61□□□□□ -0.39
SSBP2-209ENST00000507968 MKL1Q969V6 931 aa12.61□□□□□ -0.39
SSBP2-209ENST00000507968 MAP3K14Q99558 947 aa12.61□□□□□ -0.39
SSBP2-209ENST00000507968 LLPHQ9BRT6 129 aaKnown RBP12.61□□□□□ -0.39
SSBP2-209ENST00000507968 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.61□□□□□ -0.39
SSBP2-209ENST00000507968 DNAJC18Q9H819 358 aa12.61□□□□□ -0.39
SSBP2-209ENST00000507968 KAT14Q9H8E8 782 aa12.61□□□□□ -0.39
SSBP2-209ENST00000507968 RRAGCQ9HB90 399 aa12.61□□□□□ -0.39
SSBP2-209ENST00000507968 NAP1L2Q9ULW6 460 aaPredicted RBP12.61□□□□□ -0.39
SSBP2-209ENST00000507968 CTNND1O60716 968 aaKnown RBP12.6□□□□□ -0.39
SSBP2-209ENST00000507968 TTLL1O95922 423 aa12.6□□□□□ -0.39
SSBP2-209ENST00000507968 TOP1P11387 765 aaKnown RBP12.6□□□□□ -0.39
SSBP2-209ENST00000507968 PDIA4P13667 645 aaKnown RBP12.6□□□□□ -0.39
SSBP2-209ENST00000507968 NBPF12Q5TAG4 269 aaPredicted RBP12.6□□□□□ -0.39
SSBP2-209ENST00000507968 RCSD1Q6JBY9 416 aa12.6□□□□□ -0.39
SSBP2-209ENST00000507968 APOA5Q6Q788 366 aa12.6□□□□□ -0.39
SSBP2-209ENST00000507968 KRT26Q7Z3Y9 468 aa12.6□□□□□ -0.39
SSBP2-209ENST00000507968 ZNF784Q8NCA9 323 aaPredicted RBP12.6□□□□□ -0.39
SSBP2-209ENST00000507968 ZNF341Q9BYN7 854 aa12.6□□□□□ -0.39
SSBP2-209ENST00000507968 NYAP2Q9P242 653 aa12.6□□□□□ -0.39
SSBP2-209ENST00000507968 ZNF112Q9UJU3 913 aa12.6□□□□□ -0.39
SSBP2-209ENST00000507968 STX8Q9UNK0 236 aa12.6□□□□□ -0.39
SSBP2-209ENST00000507968 SBF1O95248 1867 aa12.59□□□□□ -0.39
SSBP2-209ENST00000507968 PLIN4Q96Q06 1357 aa12.59□□□□□ -0.39
SSBP2-209ENST00000507968 DICER1Q9UPY3 1922 aaKnown RBP12.59□□□□□ -0.39
SSBP2-209ENST00000507968 GOLGA8BA8MQT2 603 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms