RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 CCDC178Q5BJE1 867 aa23.75■■□□□ 1.39
USP53-203ENST00000507597 CREB3L3Q68CJ9 461 aa23.75■■□□□ 1.39
USP53-203ENST00000507597 TMEM179Q6ZVK1 233 aa23.75■■□□□ 1.39
USP53-203ENST00000507597 RALYLQ86SE5 291 aaKnown RBP23.75■■□□□ 1.39
USP53-203ENST00000507597 CCDC102AQ96A19 550 aa23.75■■□□□ 1.39
USP53-203ENST00000507597 USP26Q9BXU7 913 aa23.75■■□□□ 1.39
USP53-203ENST00000507597 DNAJC18Q9H819 358 aa23.75■■□□□ 1.39
USP53-203ENST00000507597 AS3MTQ9HBK9 375 aa23.75■■□□□ 1.39
USP53-203ENST00000507597 TSPY2A6NKD2 308 aa23.74■■□□□ 1.39
USP53-203ENST00000507597 SLC27A2O14975 620 aa23.74■■□□□ 1.39
USP53-203ENST00000507597 TSPY3P0CV98 308 aa23.74■■□□□ 1.39
USP53-203ENST00000507597 TSPY8P0CW00 308 aa23.74■■□□□ 1.39
USP53-203ENST00000507597 RRP12Q5JTH9 1297 aaKnown RBP23.74■■□□□ 1.39
USP53-203ENST00000507597 RANBP6O60518 1105 aaKnown RBP23.73■■□□□ 1.39
USP53-203ENST00000507597 INPP5BP32019 993 aa23.73■■□□□ 1.39
USP53-203ENST00000507597 HSPA4P34932 840 aa23.73■■□□□ 1.39
USP53-203ENST00000507597 VGLL4Q14135 290 aa23.73■■□□□ 1.39
USP53-203ENST00000507597 RGMBQ6NW40 437 aa23.73■■□□□ 1.39
USP53-203ENST00000507597 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.73■■□□□ 1.39
USP53-203ENST00000507597 ERO1BQ86YB8 467 aa23.73■■□□□ 1.39
USP53-203ENST00000507597 SLC44A5Q8NCS7 719 aa23.73■■□□□ 1.39
USP53-203ENST00000507597 NCOA7Q8NI08 942 aa23.73■■□□□ 1.39
USP53-203ENST00000507597 ZKSCAN4Q969J2 545 aaPredicted RBP23.73■■□□□ 1.39
USP53-203ENST00000507597 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.73■■□□□ 1.39
USP53-203ENST00000507597 USP17L5A8MUK1 530 aa23.72■■□□□ 1.39
USP53-203ENST00000507597 HSPA6P17066 643 aa23.72■■□□□ 1.39
USP53-203ENST00000507597 RASA1P20936 1047 aa23.72■■□□□ 1.39
USP53-203ENST00000507597 ECE1P42892 770 aa23.72■■□□□ 1.39
USP53-203ENST00000507597 ZNF157P51786 506 aaPredicted RBP23.72■■□□□ 1.39
USP53-203ENST00000507597 PPATQ06203 517 aa23.72■■□□□ 1.39
USP53-203ENST00000507597 DEFB115Q30KQ5 88 aa23.72■■□□□ 1.39
USP53-203ENST00000507597 TSGA10IPQ3SY00 556 aa23.72■■□□□ 1.39
USP53-203ENST00000507597 MOB2Q70IA6 237 aa23.72■■□□□ 1.39
USP53-203ENST00000507597 IQCA1Q86XH1 822 aa23.72■■□□□ 1.39
USP53-203ENST00000507597 FZD1Q9UP38 647 aa23.72■■□□□ 1.39
USP53-203ENST00000507597 LAMB1P07942 1786 aa23.72■■□□□ 1.39
USP53-203ENST00000507597 PRDM1O75626 825 aa23.71■■□□□ 1.39
USP53-203ENST00000507597 GDF11O95390 407 aa23.71■■□□□ 1.39
USP53-203ENST00000507597 GH2P01242 217 aa23.71■■□□□ 1.39
USP53-203ENST00000507597 HMGB1P09429 215 aaKnown RBP23.71■■□□□ 1.39
USP53-203ENST00000507597 PSMA5P28066 241 aa23.71■■□□□ 1.39
USP53-203ENST00000507597 TFAP4Q01664 338 aa23.71■■□□□ 1.39
USP53-203ENST00000507597 KANSL2Q9H9L4 492 aa23.71■■□□□ 1.39
USP53-203ENST00000507597 ZBTB21Q9ULJ3 1066 aa23.71■■□□□ 1.39
USP53-203ENST00000507597 E7EWF7 191 aa23.7■■□□□ 1.38
USP53-203ENST00000507597 RAB3GAP1Q15042 981 aa23.7■■□□□ 1.38
USP53-203ENST00000507597 PAXIP1Q6ZW49 1069 aaPredicted RBP23.7■■□□□ 1.38
USP53-203ENST00000507597 TBC1D10CQ8IV04 446 aa23.7■■□□□ 1.38
USP53-203ENST00000507597 NEDD1Q8NHV4 660 aa23.7■■□□□ 1.38
USP53-203ENST00000507597 SH2D4AQ9H788 454 aa23.7■■□□□ 1.38
USP53-203ENST00000507597 ELP3Q9H9T3 547 aa23.7■■□□□ 1.38
USP53-203ENST00000507597 SPDYE5A6NIY4 337 aa23.69■■□□□ 1.38
USP53-203ENST00000507597 ZBTB48P10074 688 aaPredicted RBP23.69■■□□□ 1.38
USP53-203ENST00000507597 PTPRAP18433 802 aa23.69■■□□□ 1.38
USP53-203ENST00000507597 EVX2Q03828 476 aa23.69■■□□□ 1.38
USP53-203ENST00000507597 SART3Q15020 963 aaKnown RBP23.69■■□□□ 1.38
USP53-203ENST00000507597 ARHGEF10LQ9HCE6 1279 aa23.69■■□□□ 1.38
USP53-203ENST00000507597 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.69■■□□□ 1.38
USP53-203ENST00000507597 SNCAIPQ9Y6H5 919 aa23.69■■□□□ 1.38
USP53-203ENST00000507597 RASSF10A6NK89 507 aa23.68■■□□□ 1.38
USP53-203ENST00000507597 SLURP2P0DP57 97 aa23.68■■□□□ 1.38
USP53-203ENST00000507597 AKR1B1P15121 316 aa23.68■■□□□ 1.38
USP53-203ENST00000507597 ANAPC15P60006 121 aa23.68■■□□□ 1.38
USP53-203ENST00000507597 KCNB2Q92953 911 aa23.68■■□□□ 1.38
USP53-203ENST00000507597 TCP11L1Q9NUJ3 509 aa23.68■■□□□ 1.38
USP53-203ENST00000507597 ZHX2Q9Y6X8 837 aa23.68■■□□□ 1.38
USP53-203ENST00000507597 ERICH2A1L162 156 aa23.67■■□□□ 1.38
USP53-203ENST00000507597 PPIL2Q13356 520 aa23.67■■□□□ 1.38
USP53-203ENST00000507597 OPTNQ96CV9 577 aa23.67■■□□□ 1.38
USP53-203ENST00000507597 NEK1Q96PY6 1258 aa23.67■■□□□ 1.38
USP53-203ENST00000507597 MTA3Q9BTC8 594 aa23.67■■□□□ 1.38
USP53-203ENST00000507597 WDR18Q9BV38 432 aa23.67■■□□□ 1.38
USP53-203ENST00000507597 BACH2Q9BYV9 841 aa23.67■■□□□ 1.38
USP53-203ENST00000507597 SIPA1L1O43166 1804 aa23.66■■□□□ 1.38
USP53-203ENST00000507597 B4E1Z4 1266 aa23.66■■□□□ 1.38
USP53-203ENST00000507597 SMIM22K7EJ46 135 aa23.66■■□□□ 1.38
USP53-203ENST00000507597 CXCL11O14625 94 aa23.66■■□□□ 1.38
USP53-203ENST00000507597 KDM4AO75164 1064 aa23.66■■□□□ 1.38
USP53-203ENST00000507597 MCM5P33992 734 aa23.66■■□□□ 1.38
USP53-203ENST00000507597 ICA1Q05084 483 aa23.66■■□□□ 1.38
USP53-203ENST00000507597 FAM47AQ5JRC9 791 aa23.66■■□□□ 1.38
USP53-203ENST00000507597 REM2Q8IYK8 340 aaPredicted RBP23.66■■□□□ 1.38
USP53-203ENST00000507597 ZNF280CQ8ND82 737 aa23.66■■□□□ 1.38
USP53-203ENST00000507597 CLMNQ96JQ2 1002 aa23.66■■□□□ 1.38
USP53-203ENST00000507597 TTC14Q96N46 770 aa23.66■■□□□ 1.38
USP53-203ENST00000507597 UBAC1Q9BSL1 405 aa23.66■■□□□ 1.38
USP53-203ENST00000507597 NBPF3Q9H094 633 aa23.66■■□□□ 1.38
USP53-203ENST00000507597 USP14P54578 494 aa23.65■■□□□ 1.38
USP53-203ENST00000507597 RRP1BQ14684 758 aaKnown RBP23.65■■□□□ 1.38
USP53-203ENST00000507597 SEPT2Q15019 361 aa23.65■■□□□ 1.38
USP53-203ENST00000507597 OTUD5Q96G74 571 aa23.65■■□□□ 1.38
USP53-203ENST00000507597 WNK4Q96J92 1243 aa23.65■■□□□ 1.38
USP53-203ENST00000507597 SYNPO2Q9UMS6 1093 aa23.65■■□□□ 1.38
USP53-203ENST00000507597 LAMA4Q16363 1823 aa23.65■■□□□ 1.38
USP53-203ENST00000507597 PLIN4Q96Q06 1357 aa23.65■■□□□ 1.38
USP53-203ENST00000507597 NEDD4P46934 1319 aa23.64■■□□□ 1.38
USP53-203ENST00000507597 C19orf81C9J6K1 198 aa23.64■■□□□ 1.37
USP53-203ENST00000507597 USP17L10C9JJH3 530 aa23.64■■□□□ 1.37
USP53-203ENST00000507597 TTLL1O95922 423 aa23.64■■□□□ 1.37
USP53-203ENST00000507597 GTF2A2P52657 109 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms