RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 ERICH6Q7L0X2 663 aa17.23■□□□□ 0.35
DDR1-260ENST00000507533 MRPL50Q8N5N7 158 aaKnown RBP17.23■□□□□ 0.35
DDR1-260ENST00000507533 PAGR1Q9BTK6 254 aa17.23■□□□□ 0.35
DDR1-260ENST00000507533 HERC5Q9UII4 1024 aaKnown RBP17.23■□□□□ 0.35
DDR1-260ENST00000507533 PDS5AQ29RF7 1337 aaKnown RBP17.22■□□□□ 0.35
DDR1-260ENST00000507533 MAP4K4O95819 1239 aaPredicted RBP17.22■□□□□ 0.35
DDR1-260ENST00000507533 IL15P40933 162 aaPredicted RBP17.22■□□□□ 0.35
DDR1-260ENST00000507533 SMAD3P84022 425 aaKnown RBP17.22■□□□□ 0.35
DDR1-260ENST00000507533 MAP2K5Q13163 448 aa17.22■□□□□ 0.35
DDR1-260ENST00000507533 ZNF384Q8TF68 577 aa17.22■□□□□ 0.35
DDR1-260ENST00000507533 LPAR1Q92633 364 aa17.22■□□□□ 0.35
DDR1-260ENST00000507533 EDC3Q96F86 508 aaKnown RBP17.22■□□□□ 0.35
DDR1-260ENST00000507533 DDX20Q9UHI6 824 aaKnown RBP17.22■□□□□ 0.35
DDR1-260ENST00000507533 ATP11BQ9Y2G3 1177 aa17.22■□□□□ 0.35
DDR1-260ENST00000507533 PTPRCP08575 1304 aa17.21■□□□□ 0.35
DDR1-260ENST00000507533 C19orf81C9J6K1 198 aa17.21■□□□□ 0.35
DDR1-260ENST00000507533 DNM1LO00429 736 aa17.21■□□□□ 0.35
DDR1-260ENST00000507533 CNGA1P29973 690 aa17.21■□□□□ 0.35
DDR1-260ENST00000507533 GTF3C2Q8WUA4 911 aaPredicted RBP17.21■□□□□ 0.35
DDR1-260ENST00000507533 FLRT1Q9NZU1 646 aa17.21■□□□□ 0.35
DDR1-260ENST00000507533 USP17L10C9JJH3 530 aa17.2■□□□□ 0.34
DDR1-260ENST00000507533 ANP32CO43423 234 aa17.2■□□□□ 0.34
DDR1-260ENST00000507533 MSCO60682 206 aa17.2■□□□□ 0.34
DDR1-260ENST00000507533 LDHCP07864 332 aa17.2■□□□□ 0.34
DDR1-260ENST00000507533 ASNSP08243 561 aa17.2■□□□□ 0.34
DDR1-260ENST00000507533 TIMM10P62072 90 aa17.2■□□□□ 0.34
DDR1-260ENST00000507533 GSTO1P78417 241 aa17.2■□□□□ 0.34
DDR1-260ENST00000507533 JAG1P78504 1218 aa17.2■□□□□ 0.34
DDR1-260ENST00000507533 PRDM5Q9NQX1 630 aaPredicted RBP17.2■□□□□ 0.34
DDR1-260ENST00000507533 NDUFB9Q9Y6M9 179 aa17.2■□□□□ 0.34
DDR1-260ENST00000507533 TNFRSF10AO00220 468 aa17.19■□□□□ 0.34
DDR1-260ENST00000507533 GLRX3O76003 335 aaKnown RBP17.19■□□□□ 0.34
DDR1-260ENST00000507533 TJAP1Q5JTD0 557 aa17.19■□□□□ 0.34
DDR1-260ENST00000507533 POTEEQ6S8J3 1075 aa17.19■□□□□ 0.34
DDR1-260ENST00000507533 TEX11Q8IYF3 940 aa17.19■□□□□ 0.34
DDR1-260ENST00000507533 BADQ92934 168 aa17.19■□□□□ 0.34
DDR1-260ENST00000507533 PI4KBQ9UBF8 816 aa17.19■□□□□ 0.34
DDR1-260ENST00000507533 PA2G4Q9UQ80 394 aaKnown RBP17.19■□□□□ 0.34
DDR1-260ENST00000507533 TTC28Q96AY4 2481 aa17.19■□□□□ 0.34
DDR1-260ENST00000507533 ATP2B2Q01814 1243 aa17.18■□□□□ 0.34
DDR1-260ENST00000507533 GJC2Q5T442 439 aaPredicted RBP17.18■□□□□ 0.34
DDR1-260ENST00000507533 WDR78Q5VTH9 848 aa17.18■□□□□ 0.34
DDR1-260ENST00000507533 SLC39A5Q6ZMH5 540 aa17.18■□□□□ 0.34
DDR1-260ENST00000507533 NSUN4Q96CB9 384 aaKnown RBP17.18■□□□□ 0.34
DDR1-260ENST00000507533 MAST2Q6P0Q8 1798 aa17.17■□□□□ 0.34
DDR1-260ENST00000507533 CCNA1P78396 465 aa17.17■□□□□ 0.34
DDR1-260ENST00000507533 ARRDC4Q8NCT1 418 aa17.17■□□□□ 0.34
DDR1-260ENST00000507533 XAGE2Q96GT9 111 aa17.17■□□□□ 0.34
DDR1-260ENST00000507533 EMILIN3Q9NT22 766 aa17.17■□□□□ 0.34
DDR1-260ENST00000507533 RAPGEFL1Q9UHV5 662 aa17.17■□□□□ 0.34
DDR1-260ENST00000507533 RABGAP1Q9Y3P9 1069 aa17.17■□□□□ 0.34
DDR1-260ENST00000507533 SLC15A5A6NIM6 579 aa17.16■□□□□ 0.34
DDR1-260ENST00000507533 CNMDO75829 334 aa17.16■□□□□ 0.34
DDR1-260ENST00000507533 GDF11O95390 407 aa17.16■□□□□ 0.34
DDR1-260ENST00000507533 UBTFL1P0CB47 393 aaPredicted RBP17.16■□□□□ 0.34
DDR1-260ENST00000507533 PTPREP23469 700 aa17.16■□□□□ 0.34
DDR1-260ENST00000507533 CYP2C19P33261 490 aa17.16■□□□□ 0.34
DDR1-260ENST00000507533 SHROOM1Q2M3G4 852 aaPredicted RBP17.16■□□□□ 0.34
DDR1-260ENST00000507533 USP17L2Q6R6M4 530 aa17.16■□□□□ 0.34
DDR1-260ENST00000507533 TBC1D9Q6ZT07 1266 aa17.16■□□□□ 0.34
DDR1-260ENST00000507533 TRPV1Q8NER1 839 aa17.16■□□□□ 0.34
DDR1-260ENST00000507533 SH3RF3Q8TEJ3 882 aaPredicted RBP17.16■□□□□ 0.34
DDR1-260ENST00000507533 DHX36Q9H2U1 1008 aaKnown RBP17.16■□□□□ 0.34
DDR1-260ENST00000507533 RAI14Q9P0K7 980 aa17.16■□□□□ 0.34
DDR1-260ENST00000507533 CDH23Q9H251 3354 aa17.16■□□□□ 0.34
DDR1-260ENST00000507533 ATAD5Q96QE3 1844 aa17.15■□□□□ 0.34
DDR1-260ENST00000507533 TMEM265A0A087WTH1 108 aa17.15■□□□□ 0.34
DDR1-260ENST00000507533 A0A1B0GUL7 405 aa17.15■□□□□ 0.34
DDR1-260ENST00000507533 KBTBD13C9JR72 458 aa17.15■□□□□ 0.34
DDR1-260ENST00000507533 HOXC6P09630 235 aa17.15■□□□□ 0.34
DDR1-260ENST00000507533 MVPQ14764 893 aaKnown RBP17.15■□□□□ 0.34
DDR1-260ENST00000507533 TRIM60Q495X7 471 aa17.15■□□□□ 0.34
DDR1-260ENST00000507533 USP38Q8NB14 1042 aa17.15■□□□□ 0.34
DDR1-260ENST00000507533 TRIM34Q9BYJ4 488 aa17.15■□□□□ 0.34
DDR1-260ENST00000507533 DNAJC18Q9H819 358 aa17.15■□□□□ 0.34
DDR1-260ENST00000507533 MRS2Q9HD23 443 aa17.15■□□□□ 0.34
DDR1-260ENST00000507533 COPRSQ9NQ92 184 aa17.15■□□□□ 0.34
DDR1-260ENST00000507533 GINM1Q9NU53 330 aa17.15■□□□□ 0.34
DDR1-260ENST00000507533 HMG20BQ9P0W2 317 aa17.15■□□□□ 0.34
DDR1-260ENST00000507533 ZBTB21Q9ULJ3 1066 aa17.15■□□□□ 0.34
DDR1-260ENST00000507533 MUC3AQ02505 3323 aa17.15■□□□□ 0.34
DDR1-260ENST00000507533 TRIM43BA6NCK2 446 aa17.14■□□□□ 0.33
DDR1-260ENST00000507533 SH3RF1Q7Z6J0 888 aa17.14■□□□□ 0.33
DDR1-260ENST00000507533 FOXP4Q8IVH2 680 aaPredicted RBP17.14■□□□□ 0.33
DDR1-260ENST00000507533 CRACR2BQ8N4Y2 399 aaPredicted RBP17.14■□□□□ 0.33
DDR1-260ENST00000507533 NPLOC4Q8TAT6 608 aa17.14■□□□□ 0.33
DDR1-260ENST00000507533 TRIM43Q96BQ3 446 aaPredicted RBP17.14■□□□□ 0.33
DDR1-260ENST00000507533 NOL10Q9BSC4 688 aaKnown RBP17.14■□□□□ 0.33
DDR1-260ENST00000507533 PDLIM7Q9NR12 457 aa17.14■□□□□ 0.33
DDR1-260ENST00000507533 AKAP2Q9Y2D5 859 aa17.14■□□□□ 0.33
DDR1-260ENST00000507533 IVNS1ABPQ9Y6Y0 642 aa17.14■□□□□ 0.33
DDR1-260ENST00000507533 LTBP2Q14767 1821 aa17.14■□□□□ 0.33
DDR1-260ENST00000507533 USP17L15C9J2P7 530 aa17.13■□□□□ 0.33
DDR1-260ENST00000507533 USP17L13C9JLJ4 530 aa17.13■□□□□ 0.33
DDR1-260ENST00000507533 USP17L11C9JVI0 530 aa17.13■□□□□ 0.33
DDR1-260ENST00000507533 USP17L18D6R9N7 530 aa17.13■□□□□ 0.33
DDR1-260ENST00000507533 USP17L22D6RA61 530 aa17.13■□□□□ 0.33
DDR1-260ENST00000507533 USP17L17D6RBQ6 530 aa17.13■□□□□ 0.33
DDR1-260ENST00000507533 USP17L19D6RCP7 530 aa17.13■□□□□ 0.33
DDR1-260ENST00000507533 USP17L20D6RJB6 530 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms