RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 CCDC175P0C221 793 aa17.16■□□□□ 0.34
HERC6-206ENST00000506714 RCAN1P53805 252 aa17.16■□□□□ 0.34
HERC6-206ENST00000506714 FMR1Q06787 632 aaKnown RBP eCLIP17.16■□□□□ 0.34
HERC6-206ENST00000506714 GIGYF2Q6Y7W6 1299 aaKnown RBP17.16■□□□□ 0.34
HERC6-206ENST00000506714 IFNL3Q8IZI9 196 aa17.16■□□□□ 0.34
HERC6-206ENST00000506714 TMTC2Q8N394 836 aa17.16■□□□□ 0.34
HERC6-206ENST00000506714 ARAP2Q8WZ64 1704 aa17.15■□□□□ 0.34
HERC6-206ENST00000506714 ANKRD36CQ5JPF3 1778 aa17.15■□□□□ 0.34
HERC6-206ENST00000506714 DEXIO95424 95 aa17.15■□□□□ 0.34
HERC6-206ENST00000506714 ADKP55263 362 aaKnown RBP17.15■□□□□ 0.34
HERC6-206ENST00000506714 TUBB4BP68371 445 aa17.15■□□□□ 0.34
HERC6-206ENST00000506714 AKNAD1Q5T1N1 836 aa17.15■□□□□ 0.34
HERC6-206ENST00000506714 TOGARAM2Q6ZUX3 1019 aa17.15■□□□□ 0.34
HERC6-206ENST00000506714 SPATA20Q8TB22 786 aa17.15■□□□□ 0.34
HERC6-206ENST00000506714 MYL10Q9BUA6 226 aa17.15■□□□□ 0.34
HERC6-206ENST00000506714 GREM2Q9H772 168 aa17.15■□□□□ 0.34
HERC6-206ENST00000506714 ZNF330Q9Y3S2 320 aaPredicted RBP17.15■□□□□ 0.34
HERC6-206ENST00000506714 A0A1B0GTH6 734 aa17.14■□□□□ 0.33
HERC6-206ENST00000506714 AKR1B15C9JRZ8 316 aaPredicted RBP17.14■□□□□ 0.33
HERC6-206ENST00000506714 TBC1D8O95759 1140 aa17.14■□□□□ 0.33
HERC6-206ENST00000506714 CTSWP56202 376 aa17.14■□□□□ 0.33
HERC6-206ENST00000506714 TUBB2AQ13885 445 aa17.14■□□□□ 0.33
HERC6-206ENST00000506714 RTN1Q16799 776 aa17.14■□□□□ 0.33
HERC6-206ENST00000506714 SPECC1Q5M775 1068 aa17.14■□□□□ 0.33
HERC6-206ENST00000506714 MFSD6Q6ZSS7 791 aa17.14■□□□□ 0.33
HERC6-206ENST00000506714 TUBB2BQ9BVA1 445 aa17.14■□□□□ 0.33
HERC6-206ENST00000506714 TMOD3Q9NYL9 352 aa17.14■□□□□ 0.33
HERC6-206ENST00000506714 GPS2Q13227 327 aa17.14■□□□□ 0.33
HERC6-206ENST00000506714 TXLNBQ8N3L3 684 aa17.14■□□□□ 0.33
HERC6-206ENST00000506714 WWC3Q9ULE0 1092 aa17.14■□□□□ 0.33
HERC6-206ENST00000506714 SPATA31A1Q5TZJ5 1347 aa17.13■□□□□ 0.33
HERC6-206ENST00000506714 EXOC5O00471 708 aa17.13■□□□□ 0.33
HERC6-206ENST00000506714 ACTN4O43707 911 aaKnown RBP17.13■□□□□ 0.33
HERC6-206ENST00000506714 SEC31AO94979 1220 aaKnown RBP17.13■□□□□ 0.33
HERC6-206ENST00000506714 PRR29P0C7W0 189 aa17.13■□□□□ 0.33
HERC6-206ENST00000506714 MAP3K12Q12852 859 aa17.13■□□□□ 0.33
HERC6-206ENST00000506714 PTPN21Q16825 1174 aa17.13■□□□□ 0.33
HERC6-206ENST00000506714 CTAGE1Q96RT6 745 aa17.13■□□□□ 0.33
HERC6-206ENST00000506714 ERICH2A1L162 156 aa17.13■□□□□ 0.33
HERC6-206ENST00000506714 STARD3NLO95772 234 aa17.13■□□□□ 0.33
HERC6-206ENST00000506714 GNAT2P19087 354 aa17.13■□□□□ 0.33
HERC6-206ENST00000506714 TXLNAP40222 546 aa17.13■□□□□ 0.33
HERC6-206ENST00000506714 PHKA1P46020 1223 aa17.13■□□□□ 0.33
HERC6-206ENST00000506714 WTAPQ15007 396 aa17.13■□□□□ 0.33
HERC6-206ENST00000506714 BRD3Q15059 726 aa17.13■□□□□ 0.33
HERC6-206ENST00000506714 HSP90AA4PQ58FG1 418 aa17.13■□□□□ 0.33
HERC6-206ENST00000506714 CCDC12Q8WUD4 166 aaPredicted RBP17.13■□□□□ 0.33
HERC6-206ENST00000506714 LPIN2Q92539 896 aa17.13■□□□□ 0.33
HERC6-206ENST00000506714 PARD6BQ9BYG5 372 aa17.13■□□□□ 0.33
HERC6-206ENST00000506714 SLIT2O94813 1529 aa17.13■□□□□ 0.33
HERC6-206ENST00000506714 CCDC151A5D8V7 595 aa17.12■□□□□ 0.33
HERC6-206ENST00000506714 SMC1AQ14683 1233 aaKnown RBP17.12■□□□□ 0.33
HERC6-206ENST00000506714 PPP2R5BQ15173 497 aa17.12■□□□□ 0.33
HERC6-206ENST00000506714 PUM3Q15397 648 aaKnown RBP17.12■□□□□ 0.33
HERC6-206ENST00000506714 SPATA1Q5VX52 437 aa17.12■□□□□ 0.33
HERC6-206ENST00000506714 NLRP10Q86W26 655 aa17.12■□□□□ 0.33
HERC6-206ENST00000506714 PPFIBP1Q86W92 1011 aa17.12■□□□□ 0.33
HERC6-206ENST00000506714 CRACR2BQ8N4Y2 399 aaPredicted RBP17.12■□□□□ 0.33
HERC6-206ENST00000506714 NACAP1Q9BZK3 213 aa17.12■□□□□ 0.33
HERC6-206ENST00000506714 SAMSN1Q9NSI8 373 aaKnown RBP17.12■□□□□ 0.33
HERC6-206ENST00000506714 KCNJ14Q9UNX9 436 aa17.12■□□□□ 0.33
HERC6-206ENST00000506714 POTEB2H3BUK9 544 aa17.12■□□□□ 0.33
HERC6-206ENST00000506714 SEMA3EO15041 775 aa17.12■□□□□ 0.33
HERC6-206ENST00000506714 GUCY1A2P33402 732 aa17.12■□□□□ 0.33
HERC6-206ENST00000506714 GRIN1Q05586 938 aa17.12■□□□□ 0.33
HERC6-206ENST00000506714 CTDSPL2Q05D32 466 aa17.12■□□□□ 0.33
HERC6-206ENST00000506714 TRMT44Q8IYL2 757 aaKnown RBP17.12■□□□□ 0.33
HERC6-206ENST00000506714 STAG1Q8WVM7 1258 aa17.12■□□□□ 0.33
HERC6-206ENST00000506714 DHX58Q96C10 678 aa17.12■□□□□ 0.33
HERC6-206ENST00000506714 CDCA7Q9BWT1 371 aaPredicted RBP17.12■□□□□ 0.33
HERC6-206ENST00000506714 EPB41L4AQ9HCS5 686 aaPredicted RBP17.12■□□□□ 0.33
HERC6-206ENST00000506714 THRAP3Q9Y2W1 955 aaKnown RBP17.12■□□□□ 0.33
HERC6-206ENST00000506714 PCDHB6Q9Y5E3 794 aa17.12■□□□□ 0.33
HERC6-206ENST00000506714 DOT1LQ8TEK3 1739 aa17.11■□□□□ 0.33
HERC6-206ENST00000506714 MROH5Q6ZUA9 1318 aa17.11■□□□□ 0.33
HERC6-206ENST00000506714 UBE2Q2LH0YL09 131 aa17.11■□□□□ 0.33
HERC6-206ENST00000506714 POLR3GO15318 223 aaPredicted RBP17.11■□□□□ 0.33
HERC6-206ENST00000506714 CEP112Q8N8E3 955 aa17.11■□□□□ 0.33
HERC6-206ENST00000506714 AATFQ9NY61 560 aaKnown RBP eCLIP17.11■□□□□ 0.33
HERC6-206ENST00000506714 IRS4O14654 1257 aaPredicted RBP17.1■□□□□ 0.33
HERC6-206ENST00000506714 SASH3O75995 380 aa17.1■□□□□ 0.33
HERC6-206ENST00000506714 MBD4O95243 580 aa17.1■□□□□ 0.33
HERC6-206ENST00000506714 XBP1P17861 261 aa17.1■□□□□ 0.33
HERC6-206ENST00000506714 OAS2P29728 719 aaKnown RBP17.1■□□□□ 0.33
HERC6-206ENST00000506714 FILIP1LQ4L180 1135 aa17.1■□□□□ 0.33
HERC6-206ENST00000506714 SRGAP1Q7Z6B7 1085 aa17.1■□□□□ 0.33
HERC6-206ENST00000506714 SPATA5Q8NB90 893 aa17.1■□□□□ 0.33
HERC6-206ENST00000506714 CERKQ8TCT0 537 aa17.1■□□□□ 0.33
HERC6-206ENST00000506714 MED15Q96RN5 788 aa17.1■□□□□ 0.33
HERC6-206ENST00000506714 INCENPQ9NQS7 918 aa17.1■□□□□ 0.33
HERC6-206ENST00000506714 KIF5CO60282 957 aa17.1■□□□□ 0.33
HERC6-206ENST00000506714 PDE8AO60658 829 aa17.1■□□□□ 0.33
HERC6-206ENST00000506714 ZNF827Q17R98 1081 aa17.1■□□□□ 0.33
HERC6-206ENST00000506714 MAGEB6Q8N7X4 407 aa17.1■□□□□ 0.33
HERC6-206ENST00000506714 CCDC51Q96ER9 411 aa17.1■□□□□ 0.33
HERC6-206ENST00000506714 FUT8Q9BYC5 575 aa17.1■□□□□ 0.33
HERC6-206ENST00000506714 RNF41Q9H4P4 317 aaPredicted RBP17.1■□□□□ 0.33
HERC6-206ENST00000506714 ADGRG1Q9Y653 693 aa17.1■□□□□ 0.33
HERC6-206ENST00000506714 BCORQ6W2J9 1755 aa17.1■□□□□ 0.33
HERC6-206ENST00000506714 GSG1L2A8MUP6 293 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms