RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 SRPK1Q96SB4 655 aaKnown RBP5.57□□□□□ -1.52
TRAPPC13-208ENST00000505553 KRTAP9-8Q9BYQ0 159 aa5.57□□□□□ -1.52
TRAPPC13-208ENST00000505553 KCNQ5Q9NR82 932 aa5.57□□□□□ -1.52
TRAPPC13-208ENST00000505553 GINM1Q9NU53 330 aa5.57□□□□□ -1.52
TRAPPC13-208ENST00000505553 TSPAN15O95858 294 aa5.56□□□□□ -1.52
TRAPPC13-208ENST00000505553 ZSCAN22P10073 491 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC13-208ENST00000505553 FUT4P22083 530 aa5.56□□□□□ -1.52
TRAPPC13-208ENST00000505553 EXOSC6Q5RKV6 272 aaKnown RBP5.56□□□□□ -1.52
TRAPPC13-208ENST00000505553 PEAR1Q5VY43 1037 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC13-208ENST00000505553 HGSNATQ68CP4 663 aa5.56□□□□□ -1.52
TRAPPC13-208ENST00000505553 TTLL10Q6ZVT0 673 aa5.56□□□□□ -1.52
TRAPPC13-208ENST00000505553 VN1R5Q7Z5H4 357 aa5.56□□□□□ -1.52
TRAPPC13-208ENST00000505553 SPRED2Q7Z698 418 aa5.56□□□□□ -1.52
TRAPPC13-208ENST00000505553 ANKLE2Q86XL3 938 aa5.56□□□□□ -1.52
TRAPPC13-208ENST00000505553 ZCRB1Q8TBF4 217 aaKnown RBP5.56□□□□□ -1.52
TRAPPC13-208ENST00000505553 GATA6Q92908 595 aa5.56□□□□□ -1.52
TRAPPC13-208ENST00000505553 RHOVQ96L33 236 aa5.56□□□□□ -1.52
TRAPPC13-208ENST00000505553 USP26Q9BXU7 913 aa5.56□□□□□ -1.52
TRAPPC13-208ENST00000505553 ABCB6Q9NP58 842 aa5.56□□□□□ -1.52
TRAPPC13-208ENST00000505553 MRPL42Q9Y6G3 142 aaKnown RBP5.56□□□□□ -1.52
TRAPPC13-208ENST00000505553 ENPP3O14638 875 aa5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 GREM1O60565 184 aa5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 ETFBP38117 255 aa5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 LIG3P49916 1009 aa5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 IGBP1P78318 339 aa5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 LMNB2Q03252 620 aa5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 RAB33AQ14088 237 aa5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 PTPROQ16827 1216 aa5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 DIEXFQ68CQ4 756 aaKnown RBP5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 FBXL19Q6PCT2 694 aa5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 LCNL1Q6ZST4 164 aa5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 ZNF765Q7L2R6 523 aa5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 PHC3Q8NDX5 983 aa5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 TRIM56Q9BRZ2 755 aaKnown RBP5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 BRINP2Q9C0B6 783 aa5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 TMX1Q9H3N1 280 aa5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 SOX17Q9H6I2 414 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 LATS2Q9NRM7 1088 aa5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 LMCD1Q9NZU5 365 aa5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 PRKAG3Q9UGI9 489 aa5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 MRVI1Q9Y6F6 885 aa5.55□□□□□ -1.52
TRAPPC13-208ENST00000505553 ROBO2Q9HCK4 1378 aa5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 hCG_2014768A0A024R1R8 64 aa5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 F6X3S4 739 aa5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 KLF4O43474 513 aa5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 RNASE1P07998 156 aaKnown RBP5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 DRD2P14416 443 aa5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 GSTM4Q03013 218 aa5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 APOBRQ0VD83 1088 aa5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 MAP3K11Q16584 847 aa5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 TNNI3KQ59H18 835 aa5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 SNAP47Q5SQN1 464 aa5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 TPTE2Q6XPS3 522 aa5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 C1QL4Q86Z23 238 aa5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 CCNJLQ8IV13 435 aa5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 C2CD4AQ8NCU7 369 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 PI4K2BQ8TCG2 481 aa5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 KCNB2Q92953 911 aa5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 NKD1Q969G9 470 aa5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 TCF12Q99081 682 aa5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 SRRTQ9BXP5 876 aaKnown RBP5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 BHLHE41Q9C0J9 482 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC13-208ENST00000505553 LOC100289279A0A1B0GTE1 492 aa5.53□□□□□ -1.52
TRAPPC13-208ENST00000505553 PF4P02776 101 aa5.53□□□□□ -1.52
TRAPPC13-208ENST00000505553 ESRRAP11474 423 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC13-208ENST00000505553 LMNB1P20700 586 aa5.53□□□□□ -1.52
TRAPPC13-208ENST00000505553 RPS26P62854 115 aaKnown RBP5.53□□□□□ -1.52
TRAPPC13-208ENST00000505553 SOX4Q06945 474 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC13-208ENST00000505553 CAMK2GQ13555 558 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC13-208ENST00000505553 PCNX4Q63HM2 1172 aa5.53□□□□□ -1.52
TRAPPC13-208ENST00000505553 WFDC3Q8IUB2 231 aa5.53□□□□□ -1.52
TRAPPC13-208ENST00000505553 GOLM1Q8NBJ4 401 aa5.53□□□□□ -1.52
TRAPPC13-208ENST00000505553 ANAPC16Q96DE5 110 aa5.53□□□□□ -1.52
TRAPPC13-208ENST00000505553 FBXO24O75426 580 aa5.52□□□□□ -1.53
TRAPPC13-208ENST00000505553 GARTP22102 1010 aa5.52□□□□□ -1.53
TRAPPC13-208ENST00000505553 ANAPC15P60006 121 aa5.52□□□□□ -1.53
TRAPPC13-208ENST00000505553 FAM160A1Q05DH4 1040 aa5.52□□□□□ -1.53
TRAPPC13-208ENST00000505553 RPS26P11Q5JNZ5 115 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC13-208ENST00000505553 AGMOQ6ZNB7 445 aa5.52□□□□□ -1.53
TRAPPC13-208ENST00000505553 CCDC84Q86UT8 332 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC13-208ENST00000505553 SLITRK4Q8IW52 837 aa5.52□□□□□ -1.53
TRAPPC13-208ENST00000505553 DEPDC7Q96QD5 511 aa5.52□□□□□ -1.53
TRAPPC13-208ENST00000505553 MBNL3Q9NUK0 354 aaKnown RBP5.52□□□□□ -1.53
TRAPPC13-208ENST00000505553 UBP1Q9NZI7 540 aa5.52□□□□□ -1.53
TRAPPC13-208ENST00000505553 JAG2Q9Y219 1238 aa5.52□□□□□ -1.53
TRAPPC13-208ENST00000505553 TLR6Q9Y2C9 796 aa5.52□□□□□ -1.53
TRAPPC13-208ENST00000505553 PPP1R12AO14974 1030 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC13-208ENST00000505553 ITPKAP23677 461 aa5.51□□□□□ -1.53
TRAPPC13-208ENST00000505553 CHMP4BP1P59074 171 aa5.51□□□□□ -1.53
TRAPPC13-208ENST00000505553 BNIP3Q12983 259 aa5.51□□□□□ -1.53
TRAPPC13-208ENST00000505553 MLANAQ16655 118 aa5.51□□□□□ -1.53
TRAPPC13-208ENST00000505553 CYP27C1Q4G0S4 372 aa5.51□□□□□ -1.53
TRAPPC13-208ENST00000505553 TTBK2Q6IQ55 1244 aa5.51□□□□□ -1.53
TRAPPC13-208ENST00000505553 FAM196AQ6ZSG2 479 aa5.51□□□□□ -1.53
TRAPPC13-208ENST00000505553 LRRN4CLQ8ND94 238 aa5.51□□□□□ -1.53
TRAPPC13-208ENST00000505553 HNRNPLLQ8WVV9 542 aaKnown RBP5.51□□□□□ -1.53
TRAPPC13-208ENST00000505553 RNPC3Q96LT9 517 aaKnown RBP5.51□□□□□ -1.53
TRAPPC13-208ENST00000505553 NECAB3Q96P71 396 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC13-208ENST00000505553 CRBNQ96SW2 442 aa5.51□□□□□ -1.53
TRAPPC13-208ENST00000505553 SLKQ9H2G2 1235 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms