RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 ALG1Q9BT22 464 aa8.17□□□□□ -1.1
SNX25-202ENST00000504273 SPTLC3Q9NUV7 552 aa8.17□□□□□ -1.1
SNX25-202ENST00000504273 ANAPC4Q9UJX5 808 aa8.17□□□□□ -1.1
SNX25-202ENST00000504273 KIF3AQ9Y496 699 aa8.17□□□□□ -1.1
SNX25-202ENST00000504273 CYP2D7A0A087X1C5 515 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.16□□□□□ -1.1
SNX25-202ENST00000504273 ZBTB43O43298 467 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 DHX16O60231 1041 aaKnown RBP8.16□□□□□ -1.1
SNX25-202ENST00000504273 ME1P48163 572 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 ZNF165P49910 485 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 UBE4AQ14139 1066 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 RC3H1Q5TC82 1133 aaKnown RBP8.16□□□□□ -1.1
SNX25-202ENST00000504273 ANO1Q5XXA6 986 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 BRAPQ7Z569 592 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 ANKRD18AQ8IVF6 992 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 NARFQ9UHQ1 456 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 RPS6KA4O75676 772 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 CYP7A1P22680 504 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 TOB1P50616 345 aaPredicted RBP8.16□□□□□ -1.1
SNX25-202ENST00000504273 TRDNQ13061 729 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 TXNRD3Q86VQ6 643 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 VPS37DQ86XT2 251 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 CERS3Q8IU89 383 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 STK11IPQ8N1F8 1099 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 SPC24Q8NBT2 197 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 KIAA1524Q8TCG1 905 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 HHIPL1Q96JK4 782 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.16□□□□□ -1.1
SNX25-202ENST00000504273 RGL2O15211 777 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 SPTLC2O15270 562 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 FMNL1O95466 1100 aaPredicted RBP8.16□□□□□ -1.1
SNX25-202ENST00000504273 PTMAP06454 111 aaKnown RBP8.16□□□□□ -1.1
SNX25-202ENST00000504273 FGRP09769 529 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 PPARAQ07869 468 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 SLC39A14Q15043 492 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 CCDC144BQ3MJ40 725 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 SHC4Q6S5L8 630 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 CMTR1Q8N1G2 835 aaKnown RBP8.16□□□□□ -1.1
SNX25-202ENST00000504273 IPO4Q8TEX9 1081 aaKnown RBP8.16□□□□□ -1.1
SNX25-202ENST00000504273 MRPS27Q92552 414 aaKnown RBP8.16□□□□□ -1.1
SNX25-202ENST00000504273 CDC5LQ99459 802 aaKnown RBP8.16□□□□□ -1.1
SNX25-202ENST00000504273 HPSEQ9Y251 543 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 ZNF652Q9Y2D9 606 aa8.16□□□□□ -1.1
SNX25-202ENST00000504273 STK36Q9NRP7 1315 aa8.15□□□□□ -1.1
SNX25-202ENST00000504273 GOLGA8AA7E2F4 631 aa8.15□□□□□ -1.1
SNX25-202ENST00000504273 CPLX1O14810 134 aa8.15□□□□□ -1.1
SNX25-202ENST00000504273 IFIT3O14879 490 aaKnown RBP8.15□□□□□ -1.1
SNX25-202ENST00000504273 ITGBL1O95965 494 aaPredicted RBP8.15□□□□□ -1.1
SNX25-202ENST00000504273 MMP10P09238 476 aa8.15□□□□□ -1.1
SNX25-202ENST00000504273 GNAT2P19087 354 aa8.15□□□□□ -1.1
SNX25-202ENST00000504273 PTGS1P23219 599 aa8.15□□□□□ -1.1
SNX25-202ENST00000504273 SOX10P56693 466 aa8.15□□□□□ -1.1
SNX25-202ENST00000504273 FUT2Q10981 343 aa8.15□□□□□ -1.1
SNX25-202ENST00000504273 SF3A1Q15459 793 aaKnown RBP8.15□□□□□ -1.1
SNX25-202ENST00000504273 SASS6Q6UVJ0 657 aa8.15□□□□□ -1.1
SNX25-202ENST00000504273 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.15□□□□□ -1.1
SNX25-202ENST00000504273 MFSD6Q6ZSS7 791 aa8.15□□□□□ -1.1
SNX25-202ENST00000504273 CHMP4CQ96CF2 233 aa8.15□□□□□ -1.1
SNX25-202ENST00000504273 LRP2BPQ9P2M1 347 aa8.15□□□□□ -1.1
SNX25-202ENST00000504273 R3HCC1Q9Y3T6 440 aaKnown RBP8.15□□□□□ -1.1
SNX25-202ENST00000504273 FAM237AA0A1B0GTK4 181 aa8.15□□□□□ -1.1
SNX25-202ENST00000504273 IFNAR1P17181 557 aa8.15□□□□□ -1.1
SNX25-202ENST00000504273 NOLC1Q14978 699 aaKnown RBP eCLIP8.15□□□□□ -1.1
SNX25-202ENST00000504273 CAPNS2Q96L46 248 aa8.15□□□□□ -1.1
SNX25-202ENST00000504273 SAGE1Q9NXZ1 904 aa8.15□□□□□ -1.1
SNX25-202ENST00000504273 DICER1Q9UPY3 1922 aaKnown RBP8.15□□□□□ -1.11
SNX25-202ENST00000504273 CTAGE5O15320 804 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 PFKFB1P16118 471 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 KCNA3P22001 575 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 CMA1P23946 247 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 TERF1P54274 439 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 KIAA2012Q0VF49 1180 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 SARM1Q6SZW1 724 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 ARHGEF1Q92888 912 aaKnown RBP8.14□□□□□ -1.11
SNX25-202ENST00000504273 NSUN4Q96CB9 384 aaKnown RBP8.14□□□□□ -1.11
SNX25-202ENST00000504273 GPR101Q96P66 508 aaPredicted RBP8.14□□□□□ -1.11
SNX25-202ENST00000504273 KRT23Q9C075 422 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 CNNM2Q9H8M5 875 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 ZNF219Q9P2Y4 722 aaPredicted RBP8.14□□□□□ -1.11
SNX25-202ENST00000504273 PARP3Q9Y6F1 533 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.14□□□□□ -1.11
SNX25-202ENST00000504273 MAGEB6P1A0A0J9YX57 407 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 MARCKSP29966 332 aaPredicted RBP8.14□□□□□ -1.11
SNX25-202ENST00000504273 IARSP41252 1262 aaKnown RBP8.14□□□□□ -1.11
SNX25-202ENST00000504273 TDO2P48775 406 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 LRMPQ12912 555 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 STK38Q15208 465 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 CTR9Q6PD62 1173 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 IFNLR1Q8IU57 520 aaPredicted RBP8.14□□□□□ -1.11
SNX25-202ENST00000504273 CRACR2BQ8N4Y2 399 aaPredicted RBP8.14□□□□□ -1.11
SNX25-202ENST00000504273 KCNG4Q8TDN1 519 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 CLIC6Q96NY7 704 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 SLC26A6Q9BXS9 759 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 HSD3B7Q9H2F3 369 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 ABCF2Q9UG63 623 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 ZNF202O95125 648 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 RPS8P62241 208 aaKnown RBP8.14□□□□□ -1.11
SNX25-202ENST00000504273 GRIN1Q05586 938 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 PKN1Q16512 942 aa8.14□□□□□ -1.11
SNX25-202ENST00000504273 STX1AQ16623 288 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms