RNA–Protein interactions for RNA: ENST00000504221.5

CAST-212, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-212ENST00000504221 SYNGAP1Q96PV0 1343 aa9.53□□□□□ -0.88
CAST-212ENST00000504221 SZT2Q5T011 3432 aa9.53□□□□□ -0.88
CAST-212ENST00000504221 SCN4AP35499 1836 aa9.52□□□□□ -0.89
CAST-212ENST00000504221 GSC2O15499 205 aa9.52□□□□□ -0.89
CAST-212ENST00000504221 C4AP0C0L4 1744 aa9.52□□□□□ -0.89
CAST-212ENST00000504221 INPP5BP32019 993 aa9.52□□□□□ -0.89
CAST-212ENST00000504221 IFT43Q96FT9 208 aa9.52□□□□□ -0.89
CAST-212ENST00000504221 SMG9Q9H0W8 520 aaKnown RBP9.52□□□□□ -0.89
CAST-212ENST00000504221 C11orf16Q9NQ32 467 aa9.52□□□□□ -0.89
CAST-212ENST00000504221 RNF186Q9NXI6 227 aa9.52□□□□□ -0.89
CAST-212ENST00000504221 TOGARAM1Q9Y4F4 1720 aa9.51□□□□□ -0.89
CAST-212ENST00000504221 SPINK2P20155 84 aa9.51□□□□□ -0.89
CAST-212ENST00000504221 TARSP26639 723 aaKnown RBP9.51□□□□□ -0.89
CAST-212ENST00000504221 FMR1Q06787 632 aaKnown RBP eCLIP9.51□□□□□ -0.89
CAST-212ENST00000504221 SIX5Q8N196 739 aa9.51□□□□□ -0.89
CAST-212ENST00000504221 UBR3Q6ZT12 1888 aa9.51□□□□□ -0.89
CAST-212ENST00000504221 GYS1P13807 737 aa9.5□□□□□ -0.89
CAST-212ENST00000504221 RTN1Q16799 776 aa9.5□□□□□ -0.89
CAST-212ENST00000504221 ZDHHC13Q8IUH4 622 aa9.5□□□□□ -0.89
CAST-212ENST00000504221 GAS2L2Q8NHY3 880 aa9.5□□□□□ -0.89
CAST-212ENST00000504221 UBL7Q96S82 380 aaPredicted RBP9.5□□□□□ -0.89
CAST-212ENST00000504221 PODXL2Q9NZ53 605 aa9.5□□□□□ -0.89
CAST-212ENST00000504221 ADAMTSL1Q8N6G6 1762 aa9.5□□□□□ -0.89
CAST-212ENST00000504221 CACNA1AO00555 2505 aa9.49□□□□□ -0.89
CAST-212ENST00000504221 A0A1W2PPC1 479 aa9.49□□□□□ -0.89
CAST-212ENST00000504221 PALM3A6NDB9 673 aaPredicted RBP9.49□□□□□ -0.89
CAST-212ENST00000504221 RGL3Q3MIN7 710 aa9.49□□□□□ -0.89
CAST-212ENST00000504221 OGFOD1Q8N543 542 aa9.49□□□□□ -0.89
CAST-212ENST00000504221 DEFB123Q8N688 67 aa9.49□□□□□ -0.89
CAST-212ENST00000504221 RTCBQ9Y3I0 505 aaKnown RBP9.49□□□□□ -0.89
CAST-212ENST00000504221 INSRP06213 1382 aa9.49□□□□□ -0.89
CAST-212ENST00000504221 COL6A3P12111 3177 aa9.49□□□□□ -0.89
CAST-212ENST00000504221 DOT1LQ8TEK3 1739 aa9.48□□□□□ -0.89
CAST-212ENST00000504221 TAF1LQ8IZX4 1826 aa9.48□□□□□ -0.89
CAST-212ENST00000504221 TMEM265A0A087WTH1 108 aa9.48□□□□□ -0.89
CAST-212ENST00000504221 PTCD1O75127 700 aaKnown RBP9.48□□□□□ -0.89
CAST-212ENST00000504221 RFC4P35249 363 aa9.48□□□□□ -0.89
CAST-212ENST00000504221 MAP3K12Q12852 859 aa9.48□□□□□ -0.89
CAST-212ENST00000504221 SETDB1Q15047 1291 aa9.48□□□□□ -0.89
CAST-212ENST00000504221 CFAP70Q5T0N1 1121 aa9.48□□□□□ -0.89
CAST-212ENST00000504221 LINC00116Q8NCU8 138 aa9.48□□□□□ -0.89
CAST-212ENST00000504221 STOML1Q9UBI4 398 aa9.48□□□□□ -0.89
CAST-212ENST00000504221 TRAK1Q9UPV9 953 aa9.48□□□□□ -0.89
CAST-212ENST00000504221 LTBP3Q9NS15 1303 aa9.48□□□□□ -0.89
CAST-212ENST00000504221 USP17L3A6NCW0 530 aa9.47□□□□□ -0.89
CAST-212ENST00000504221 USP17L4A6NCW7 530 aa9.47□□□□□ -0.89
CAST-212ENST00000504221 TRAF5O00463 557 aa9.47□□□□□ -0.89
CAST-212ENST00000504221 CELF2O95319 508 aaKnown RBP9.47□□□□□ -0.89
CAST-212ENST00000504221 NRLP54845 237 aa9.47□□□□□ -0.89
CAST-212ENST00000504221 FAM50AQ14320 339 aaKnown RBP9.47□□□□□ -0.89
CAST-212ENST00000504221 USP17L2Q6R6M4 530 aa9.47□□□□□ -0.89
CAST-212ENST00000504221 HFE2Q6ZVN8 426 aa9.47□□□□□ -0.89
CAST-212ENST00000504221 USP17L1Q7RTZ2 530 aa9.47□□□□□ -0.89
CAST-212ENST00000504221 KRT25Q7Z3Z0 450 aa9.47□□□□□ -0.89
CAST-212ENST00000504221 ZCRB1Q8TBF4 217 aaKnown RBP9.47□□□□□ -0.89
CAST-212ENST00000504221 TAOK3Q9H2K8 898 aa9.47□□□□□ -0.89
CAST-212ENST00000504221 SRA1Q9HD15 236 aaKnown RBP9.47□□□□□ -0.89
CAST-212ENST00000504221 COG6Q9Y2V7 657 aa9.47□□□□□ -0.89
CAST-212ENST00000504221 EPB42P16452 691 aa9.46□□□□□ -0.9
CAST-212ENST00000504221 EN2P19622 333 aaPredicted RBP9.46□□□□□ -0.9
CAST-212ENST00000504221 DTX1Q86Y01 620 aa9.46□□□□□ -0.9
CAST-212ENST00000504221 SYNE4Q8N205 404 aa9.46□□□□□ -0.9
CAST-212ENST00000504221 ARMC10Q8N2F6 343 aa9.46□□□□□ -0.9
CAST-212ENST00000504221 AGGF1Q8N302 714 aaeCLIP9.46□□□□□ -0.9
CAST-212ENST00000504221 SCG3Q8WXD2 468 aaKnown RBP9.46□□□□□ -0.9
CAST-212ENST00000504221 CDK19Q9BWU1 502 aa9.46□□□□□ -0.9
CAST-212ENST00000504221 TRIOBPQ9H2D6 2365 aa9.45□□□□□ -0.9
CAST-212ENST00000504221 PRR19A6NJB7 356 aa9.45□□□□□ -0.9
CAST-212ENST00000504221 SOX1O00570 391 aaPredicted RBP9.45□□□□□ -0.9
CAST-212ENST00000504221 SASH3O75995 380 aa9.45□□□□□ -0.9
CAST-212ENST00000504221 KIF23Q02241 960 aaPredicted RBP9.45□□□□□ -0.9
CAST-212ENST00000504221 MCM6Q14566 821 aa9.45□□□□□ -0.9
CAST-212ENST00000504221 INTS5Q6P9B9 1019 aaKnown RBP9.45□□□□□ -0.9
CAST-212ENST00000504221 MPRIPQ6WCQ1 1025 aa9.45□□□□□ -0.9
CAST-212ENST00000504221 RNF123Q5XPI4 1314 aa9.45□□□□□ -0.9
CAST-212ENST00000504221 CCDC88AQ3V6T2 1871 aa9.45□□□□□ -0.9
CAST-212ENST00000504221 LOC102724428A0A0B4J2F2 783 aa9.44□□□□□ -0.9
CAST-212ENST00000504221 RARAP10276 462 aa9.44□□□□□ -0.9
CAST-212ENST00000504221 IDH3AP50213 366 aa9.44□□□□□ -0.9
CAST-212ENST00000504221 SIK1P57059 783 aa9.44□□□□□ -0.9
CAST-212ENST00000504221 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.44□□□□□ -0.9
CAST-212ENST00000504221 ANKRD24Q8TF21 1146 aa9.44□□□□□ -0.9
CAST-212ENST00000504221 KRTAP4-2Q9BYR5 136 aa9.44□□□□□ -0.9
CAST-212ENST00000504221 PRO3102Q9H379 93 aa9.44□□□□□ -0.9
CAST-212ENST00000504221 ADGRE2Q9UHX3 823 aa9.44□□□□□ -0.9
CAST-212ENST00000504221 RGPD5Q99666 1765 aa9.44□□□□□ -0.9
CAST-212ENST00000504221 ROCK1Q13464 1354 aa9.43□□□□□ -0.9
CAST-212ENST00000504221 H0YIN7 160 aa9.43□□□□□ -0.9
CAST-212ENST00000504221 GLB1P16278 677 aa9.43□□□□□ -0.9
CAST-212ENST00000504221 NFIAQ12857 509 aa9.43□□□□□ -0.9
CAST-212ENST00000504221 MAP4K3Q8IVH8 894 aa9.43□□□□□ -0.9
CAST-212ENST00000504221 IL22RA1Q8N6P7 574 aa9.43□□□□□ -0.9
CAST-212ENST00000504221 ZNF296Q8WUU4 475 aaPredicted RBP9.43□□□□□ -0.9
CAST-212ENST00000504221 PLD4Q96BZ4 506 aa9.43□□□□□ -0.9
CAST-212ENST00000504221 MTMR10Q9NXD2 777 aa9.43□□□□□ -0.9
CAST-212ENST00000504221 TLR7Q9NYK1 1049 aaKnown RBP9.43□□□□□ -0.9
CAST-212ENST00000504221 DHX15O43143 795 aaKnown RBP9.42□□□□□ -0.9
CAST-212ENST00000504221 LMOD1P29536 600 aaPredicted RBP9.42□□□□□ -0.9
CAST-212ENST00000504221 JAG1P78504 1218 aa9.42□□□□□ -0.9
CAST-212ENST00000504221 ADAMTS19Q8TE59 1207 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms