RNA–Protein interactions for RNA: ENST00000504221.5

CAST-212, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-212ENST00000504221 AEBP2Q6ZN18 517 aaPredicted RBP35.11■■■■□ 3.21
CAST-212ENST00000504221 CHIC1Q5VXU3 224 aa32.85■■■□□ 2.85
CAST-212ENST00000504221 SENP3Q9H4L4 574 aaPredicted RBP29.93■■■□□ 2.38
CAST-212ENST00000504221 PHF23Q9BUL5 403 aaPredicted RBP29.52■■■□□ 2.32
CAST-212ENST00000504221 FOXD1Q16676 465 aa28.01■■■□□ 2.07
CAST-212ENST00000504221 POTEDQ86YR6 584 aa26.54■■□□□ 1.84
CAST-212ENST00000504221 MSH5O43196 834 aa26.33■■□□□ 1.81
CAST-212ENST00000504221 PLPPR3Q6T4P5 718 aa25.99■■□□□ 1.75
CAST-212ENST00000504221 PIAS4Q8N2W9 510 aaPredicted RBP25.97■■□□□ 1.75
CAST-212ENST00000504221 PPP6R1Q9UPN7 881 aa25.88■■□□□ 1.73
CAST-212ENST00000504221 ADRA2BP18089 450 aa25.71■■□□□ 1.71
CAST-212ENST00000504221 MAPK8IP2Q13387 824 aaPredicted RBP23.78■■□□□ 1.4
CAST-212ENST00000504221 DMRT2Q9Y5R5 561 aa23.7■■□□□ 1.38
CAST-212ENST00000504221 SCAF1Q9H7N4 1312 aaKnown RBP23.45■■□□□ 1.34
CAST-212ENST00000504221 CACNB1Q02641 598 aaPredicted RBP22.85■■□□□ 1.25
CAST-212ENST00000504221 PPP4R3CPQ6ZMV5 832 aa22.74■■□□□ 1.23
CAST-212ENST00000504221 HOXD11P31277 338 aaPredicted RBP22.67■■□□□ 1.22
CAST-212ENST00000504221 DCAF8L1A6NGE4 600 aa22.61■■□□□ 1.21
CAST-212ENST00000504221 RNF39Q9H2S5 420 aa22.48■■□□□ 1.19
CAST-212ENST00000504221 CNKSR2Q8WXI2 1034 aa22.41■■□□□ 1.18
CAST-212ENST00000504221 RNF216Q9NWF9 866 aaPredicted RBP22.35■■□□□ 1.17
CAST-212ENST00000504221 C1QBPQ07021 282 aaKnown RBP22.09■■□□□ 1.13
CAST-212ENST00000504221 DNAJC5BQ9UF47 199 aa22.01■■□□□ 1.11
CAST-212ENST00000504221 NCBP3Q53F19 620 aaKnown RBP21.66■■□□□ 1.06
CAST-212ENST00000504221 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.49■■□□□ 1.03
CAST-212ENST00000504221 NPM3O75607 178 aaKnown RBP21.43■■□□□ 1.02
CAST-212ENST00000504221 U3KPZ7 1027 aaPredicted RBP21.06■□□□□ 0.96
CAST-212ENST00000504221 DSG3P32926 999 aa20.89■□□□□ 0.93
CAST-212ENST00000504221 SPINK5Q9NQ38 1064 aaPredicted RBP20.89■□□□□ 0.93
CAST-212ENST00000504221 CAPN15O75808 1086 aa20.8■□□□□ 0.92
CAST-212ENST00000504221 POTEHQ6S545 545 aa20.68■□□□□ 0.9
CAST-212ENST00000504221 SLC4A2P04920 1241 aa20.63■□□□□ 0.89
CAST-212ENST00000504221 KCNA4P22459 653 aa20.6■□□□□ 0.89
CAST-212ENST00000504221 TRHP20396 242 aaPredicted RBP20.36■□□□□ 0.85
CAST-212ENST00000504221 ZNF219Q9P2Y4 722 aaPredicted RBP20.32■□□□□ 0.84
CAST-212ENST00000504221 APLP2Q06481 763 aa20.31■□□□□ 0.84
CAST-212ENST00000504221 ABCB7O75027 752 aa20.3■□□□□ 0.84
CAST-212ENST00000504221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.23■□□□□ 0.83
CAST-212ENST00000504221 HNRNPUL2Q1KMD3 747 aaKnown RBP20.23■□□□□ 0.83
CAST-212ENST00000504221 SAMD1Q6SPF0 538 aaPredicted RBP20.11■□□□□ 0.81
CAST-212ENST00000504221 RBM42Q9BTD8 480 aaKnown RBP19.85■□□□□ 0.77
CAST-212ENST00000504221 MYCNP04198 464 aaPredicted RBP19.77■□□□□ 0.76
CAST-212ENST00000504221 POLA2Q14181 598 aa19.76■□□□□ 0.75
CAST-212ENST00000504221 CHRDL2Q6WN34 429 aa19.65■□□□□ 0.74
CAST-212ENST00000504221 ATF5Q9Y2D1 282 aaPredicted RBP19.45■□□□□ 0.7
CAST-212ENST00000504221 AKT1S1Q96B36 256 aa19.35■□□□□ 0.69
CAST-212ENST00000504221 FOXD4L1Q9NU39 408 aa19.33■□□□□ 0.68
CAST-212ENST00000504221 SLC4A1APQ9BWU0 796 aaKnown RBP19.29■□□□□ 0.68
CAST-212ENST00000504221 ZBTB12Q9Y330 459 aaPredicted RBP19.27■□□□□ 0.68
CAST-212ENST00000504221 REM2Q8IYK8 340 aaPredicted RBP19.19■□□□□ 0.66
CAST-212ENST00000504221 SP7Q8TDD2 431 aaPredicted RBP19.16■□□□□ 0.66
CAST-212ENST00000504221 OSCARQ8IYS5 282 aa19.12■□□□□ 0.65
CAST-212ENST00000504221 PIP4P2Q8N4L2 257 aa19.11■□□□□ 0.65
CAST-212ENST00000504221 PITPNM1O00562 1244 aa18.98■□□□□ 0.63
CAST-212ENST00000504221 ZBTB22O15209 634 aa18.98■□□□□ 0.63
CAST-212ENST00000504221 FXR2P51116 673 aaKnown RBP eCLIP18.95■□□□□ 0.625e-6■□□□□ 9.5
CAST-212ENST00000504221 HAX1O00165 279 aa18.82■□□□□ 0.6
CAST-212ENST00000504221 ATXN8OSP0DMR3 200 aa18.82■□□□□ 0.6
CAST-212ENST00000504221 SPDYE2BA6NHP3 402 aa18.68■□□□□ 0.58
CAST-212ENST00000504221 SPDYE6P0CI01 402 aa18.68■□□□□ 0.58
CAST-212ENST00000504221 SPDYE2Q495Y8 402 aa18.68■□□□□ 0.58
CAST-212ENST00000504221 EVX2Q03828 476 aa18.67■□□□□ 0.58
CAST-212ENST00000504221 FBLN2P98095 1184 aa18.58■□□□□ 0.56
CAST-212ENST00000504221 MKRN4PQ13434 485 aaPredicted RBP18.53■□□□□ 0.56
CAST-212ENST00000504221 PRKAR2AP13861 404 aaKnown RBP18.45■□□□□ 0.54
CAST-212ENST00000504221 SPDYE1Q8NFV5 336 aaPredicted RBP18.45■□□□□ 0.54
CAST-212ENST00000504221 SSUH2Q9Y2M2 353 aa18.43■□□□□ 0.54
CAST-212ENST00000504221 CLEC11AQ9Y240 323 aa18.4■□□□□ 0.54
CAST-212ENST00000504221 ZNF692Q9BU19 519 aaPredicted RBP18.36■□□□□ 0.53
CAST-212ENST00000504221 C19orf67A6NJJ6 358 aa18.35■□□□□ 0.53
CAST-212ENST00000504221 GABBR2O75899 941 aa18.18■□□□□ 0.5
CAST-212ENST00000504221 CHADLQ6NUI6 762 aa18.15■□□□□ 0.5
CAST-212ENST00000504221 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.48
CAST-212ENST00000504221 PRR29P0C7W0 189 aa18.06■□□□□ 0.48
CAST-212ENST00000504221 LHX8Q68G74 356 aa17.96■□□□□ 0.47
CAST-212ENST00000504221 POTEIP0CG38 1075 aa17.85■□□□□ 0.45
CAST-212ENST00000504221 FARP1Q9Y4F1 1045 aaPredicted RBP17.85■□□□□ 0.45
CAST-212ENST00000504221 CD44P16070 742 aaKnown RBP17.82■□□□□ 0.44
CAST-212ENST00000504221 CLCN6P51797 869 aa17.71■□□□□ 0.43
CAST-212ENST00000504221 CSRNP3Q8WYN3 585 aa17.67■□□□□ 0.42
CAST-212ENST00000504221 CREBZFQ9NS37 354 aa17.58■□□□□ 0.4
CAST-212ENST00000504221 ZNF579Q8NAF0 562 aaKnown RBP17.57■□□□□ 0.4
CAST-212ENST00000504221 DCBLD2Q96PD2 775 aa17.5■□□□□ 0.39
CAST-212ENST00000504221 ZRANB1Q9UGI0 708 aa17.5■□□□□ 0.39
CAST-212ENST00000504221 STAG3Q9UJ98 1225 aa17.47■□□□□ 0.39
CAST-212ENST00000504221 GALR2O43603 387 aaPredicted RBP17.39■□□□□ 0.37
CAST-212ENST00000504221 SPDYE4A6NLX3 237 aa17.33■□□□□ 0.36
CAST-212ENST00000504221 MNX1P50219 401 aaPredicted RBP17.27■□□□□ 0.36
CAST-212ENST00000504221 POTEB2H3BUK9 544 aa17.25■□□□□ 0.35
CAST-212ENST00000504221 OTUD5Q96G74 571 aa17.25■□□□□ 0.35
CAST-212ENST00000504221 PHF12Q96QT6 1004 aa17.23■□□□□ 0.35
CAST-212ENST00000504221 PAK3O75914 559 aaPredicted RBP17.18■□□□□ 0.34
CAST-212ENST00000504221 ABCC9O60706 1549 aa17.16■□□□□ 0.34
CAST-212ENST00000504221 NPM1P06748 294 aaKnown RBP eCLIP17.15■□□□□ 0.34
CAST-212ENST00000504221 PELP1Q8IZL8 1130 aaKnown RBP17.15■□□□□ 0.34
CAST-212ENST00000504221 PLSCR2Q9NRY7 297 aa17.09■□□□□ 0.33
CAST-212ENST00000504221 EHMT2Q96KQ7 1210 aa17.06■□□□□ 0.32
CAST-212ENST00000504221 DNAJC5Q9H3Z4 198 aa17.06■□□□□ 0.32
CAST-212ENST00000504221 ASTLQ6HA08 431 aaPredicted RBP17.02■□□□□ 0.32
CAST-212ENST00000504221 MS4A3Q96HJ5 214 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms