RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 PTPN18Q99952 460 aa4.72□□□□□ -1.65
USP46-205ENST00000504078 COL1A1P02452 1464 aaPredicted RBP4.72□□□□□ -1.65
USP46-205ENST00000504078 ALPK3Q96L96 1907 aa4.72□□□□□ -1.65
USP46-205ENST00000504078 CCL15-CCL14A0A0B4J2E2 113 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 MOXD2PA6NHM9 499 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 FURINP09958 794 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 NDUFV2P19404 249 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 FSHRP23945 695 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 SSTR3P32745 418 aaPredicted RBP4.71□□□□□ -1.66
USP46-205ENST00000504078 CTSWP56202 376 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 RIPK4P57078 832 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 GTF2IP78347 998 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 DIXDC1Q155Q3 683 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 CCL15Q16663 113 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 CCDC152Q4G0S7 254 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 LDLRAD1Q5T700 205 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 INTS3Q68E01 1043 aaKnown RBP4.71□□□□□ -1.66
USP46-205ENST00000504078 RIC3Q7Z5B4 369 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 FAM43AQ8N2R8 423 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 OGFOD1Q8N543 542 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 CERS5Q8N5B7 392 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 BRI3BPQ8WY22 251 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 GMCL1Q96IK5 515 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 CFHR5Q9BXR6 569 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 DEFB129Q9H1M3 183 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 GREM2Q9H772 168 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 PHAXQ9H814 394 aaKnown RBP4.71□□□□□ -1.66
USP46-205ENST00000504078 PODXL2Q9NZ53 605 aa4.71□□□□□ -1.66
USP46-205ENST00000504078 TRIOBPQ9H2D6 2365 aa4.7□□□□□ -1.66
USP46-205ENST00000504078 ELL2O00472 640 aaPredicted RBP4.7□□□□□ -1.66
USP46-205ENST00000504078 ATP2B4P23634 1241 aa4.7□□□□□ -1.66
USP46-205ENST00000504078 CTGFP29279 349 aa4.7□□□□□ -1.66
USP46-205ENST00000504078 CCT4P50991 539 aaKnown RBP4.7□□□□□ -1.66
USP46-205ENST00000504078 RBM5P52756 815 aaKnown RBP eCLIP4.7□□□□□ -1.66
USP46-205ENST00000504078 CACNB3P54284 484 aa4.7□□□□□ -1.66
USP46-205ENST00000504078 VGLL4Q14135 290 aa4.7□□□□□ -1.66
USP46-205ENST00000504078 GAS6Q14393 721 aa4.7□□□□□ -1.66
USP46-205ENST00000504078 DLGAP5Q15398 846 aa4.7□□□□□ -1.66
USP46-205ENST00000504078 CFAP100Q494V2 611 aa4.7□□□□□ -1.66
USP46-205ENST00000504078 C4orf48Q5BLP8 95 aa4.7□□□□□ -1.66
USP46-205ENST00000504078 VASH1Q7L8A9 365 aaPredicted RBP4.7□□□□□ -1.66
USP46-205ENST00000504078 TRMT44Q8IYL2 757 aaKnown RBP4.7□□□□□ -1.66
USP46-205ENST00000504078 ZBTB38Q8NAP3 1195 aaPredicted RBP4.7□□□□□ -1.66
USP46-205ENST00000504078 HELBQ8NG08 1087 aaPredicted RBP4.7□□□□□ -1.66
USP46-205ENST00000504078 C1QTNF2Q9BXJ5 285 aa4.7□□□□□ -1.66
USP46-205ENST00000504078 MBIPQ9NS73 344 aa4.7□□□□□ -1.66
USP46-205ENST00000504078 PGPEP1Q9NXJ5 209 aa4.7□□□□□ -1.66
USP46-205ENST00000504078 ZMYND8Q9ULU4 1186 aaPredicted RBP4.7□□□□□ -1.66
USP46-205ENST00000504078 TIMELESSQ9UNS1 1208 aa4.7□□□□□ -1.66
USP46-205ENST00000504078 COL6A3P12111 3177 aa4.7□□□□□ -1.66
USP46-205ENST00000504078 ZNF804BA4D1E1 1349 aa4.7□□□□□ -1.66
USP46-205ENST00000504078 KIAA0100Q14667 2235 aaKnown RBP4.69□□□□□ -1.66
USP46-205ENST00000504078 KRBA1A5PL33 1030 aa4.69□□□□□ -1.66
USP46-205ENST00000504078 TCP10L2B9ZVM9 353 aa4.69□□□□□ -1.66
USP46-205ENST00000504078 PPP1R12BO60237 982 aaPredicted RBP4.69□□□□□ -1.66
USP46-205ENST00000504078 PDE8AO60658 829 aa4.69□□□□□ -1.66
USP46-205ENST00000504078 FARP2O94887 1054 aaPredicted RBP4.69□□□□□ -1.66
USP46-205ENST00000504078 ZBTB48P10074 688 aaPredicted RBP4.69□□□□□ -1.66
USP46-205ENST00000504078 SYN1P17600 705 aa4.69□□□□□ -1.66
USP46-205ENST00000504078 TMPOP42166 694 aaKnown RBP4.69□□□□□ -1.66
USP46-205ENST00000504078 KCNJ4P48050 445 aa4.69□□□□□ -1.66
USP46-205ENST00000504078 IREB2P48200 963 aaKnown RBP4.69□□□□□ -1.66
USP46-205ENST00000504078 RASA3Q14644 834 aa4.69□□□□□ -1.66
USP46-205ENST00000504078 CWF19L2Q2TBE0 894 aaKnown RBP4.69□□□□□ -1.66
USP46-205ENST00000504078 DUSP27Q5VZP5 1158 aa4.69□□□□□ -1.66
USP46-205ENST00000504078 TTLL5Q6EMB2 1281 aa4.69□□□□□ -1.66
USP46-205ENST00000504078 ARMC2Q8NEN0 867 aa4.69□□□□□ -1.66
USP46-205ENST00000504078 DIS3LQ8TF46 1054 aaKnown RBP4.69□□□□□ -1.66
USP46-205ENST00000504078 ZBED3Q96IU2 234 aaPredicted RBP4.69□□□□□ -1.66
USP46-205ENST00000504078 TMEM39BQ9GZU3 492 aa4.69□□□□□ -1.66
USP46-205ENST00000504078 CWC25Q9NXE8 425 aaPredicted RBP4.69□□□□□ -1.66
USP46-205ENST00000504078 STAP2Q9UGK3 403 aa4.69□□□□□ -1.66
USP46-205ENST00000504078 CPA4Q9UI42 421 aa4.69□□□□□ -1.66
USP46-205ENST00000504078 MINPP1Q9UNW1 487 aa4.69□□□□□ -1.66
USP46-205ENST00000504078 MYPNQ86TC9 1320 aa4.69□□□□□ -1.66
USP46-205ENST00000504078 MYO3BQ8WXR4 1341 aa4.69□□□□□ -1.66
USP46-205ENST00000504078 CLSPNQ9HAW4 1339 aa4.69□□□□□ -1.66
USP46-205ENST00000504078 ZBTB7BO15156 539 aaPredicted RBP4.68□□□□□ -1.66
USP46-205ENST00000504078 TAF5LO75529 589 aa4.68□□□□□ -1.66
USP46-205ENST00000504078 USP2O75604 605 aaPredicted RBP4.68□□□□□ -1.66
USP46-205ENST00000504078 F12P00748 615 aaPredicted RBP4.68□□□□□ -1.66
USP46-205ENST00000504078 PCCAP05165 728 aaPredicted RBP4.68□□□□□ -1.66
USP46-205ENST00000504078 CCL5P13501 91 aa4.68□□□□□ -1.66
USP46-205ENST00000504078 LACTBP83111 547 aaPredicted RBP4.68□□□□□ -1.66
USP46-205ENST00000504078 PLCB2Q00722 1185 aa4.68□□□□□ -1.66
USP46-205ENST00000504078 PRKCZQ05513 592 aa4.68□□□□□ -1.66
USP46-205ENST00000504078 STRIP1Q5VSL9 837 aa4.68□□□□□ -1.66
USP46-205ENST00000504078 OTUD7BQ6GQQ9 843 aa4.68□□□□□ -1.66
USP46-205ENST00000504078 FOXR1Q6PIV2 292 aa4.68□□□□□ -1.66
USP46-205ENST00000504078 UBE3BQ7Z3V4 1068 aa4.68□□□□□ -1.66
USP46-205ENST00000504078 NBPF11Q86T75 865 aa4.68□□□□□ -1.66
USP46-205ENST00000504078 ANKRD13AQ8IZ07 590 aa4.68□□□□□ -1.66
USP46-205ENST00000504078 C7orf61Q8IZ16 206 aa4.68□□□□□ -1.66
USP46-205ENST00000504078 PRMT6Q96LA8 375 aaPredicted RBP4.68□□□□□ -1.66
USP46-205ENST00000504078 FAM161BQ96MY7 647 aa4.68□□□□□ -1.66
USP46-205ENST00000504078 CDC5LQ99459 802 aaKnown RBP4.68□□□□□ -1.66
USP46-205ENST00000504078 COA1Q9GZY4 146 aa4.68□□□□□ -1.66
USP46-205ENST00000504078 PRO3102Q9H379 93 aa4.68□□□□□ -1.66
USP46-205ENST00000504078 TDRD3Q9H7E2 651 aaKnown RBP4.68□□□□□ -1.66
USP46-205ENST00000504078 ZFYVE28Q9HCC9 887 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms