RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 ALX1Q15699 326 aa10.94□□□□□ -0.66
ARHGEF28-206ENST00000504003 CFAP100Q494V2 611 aa10.94□□□□□ -0.66
ARHGEF28-206ENST00000504003 IFNL3Q8IZI9 196 aa10.94□□□□□ -0.66
ARHGEF28-206ENST00000504003 LCORLQ8N3X6 602 aa10.94□□□□□ -0.66
ARHGEF28-206ENST00000504003 MTMR14Q8NCE2 650 aa10.94□□□□□ -0.66
ARHGEF28-206ENST00000504003 TBC1D32Q96NH3 1257 aa10.94□□□□□ -0.66
ARHGEF28-206ENST00000504003 MXD3Q9BW11 206 aa10.94□□□□□ -0.66
ARHGEF28-206ENST00000504003 RNF41Q9H4P4 317 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF28-206ENST00000504003 NPDC1Q9NQX5 325 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF28-206ENST00000504003 USP40Q9NVE5 1235 aa10.94□□□□□ -0.66
ARHGEF28-206ENST00000504003 ARPP21Q9UBL0 812 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF28-206ENST00000504003 V9GY48 417 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF28-206ENST00000504003 GFRA3O60609 400 aa10.93□□□□□ -0.66
ARHGEF28-206ENST00000504003 HMGB1P09429 215 aaKnown RBP10.93□□□□□ -0.66
ARHGEF28-206ENST00000504003 NT5C2P49902 561 aa10.93□□□□□ -0.66
ARHGEF28-206ENST00000504003 GMPSP49915 693 aaPredicted RBP10.93□□□□□ -0.66
ARHGEF28-206ENST00000504003 C1QTNF8P60827 252 aa10.93□□□□□ -0.66
ARHGEF28-206ENST00000504003 DYNLL1P63167 89 aaKnown RBP10.93□□□□□ -0.66
ARHGEF28-206ENST00000504003 PTH1RQ03431 593 aa10.93□□□□□ -0.66
ARHGEF28-206ENST00000504003 SLFNL1Q499Z3 407 aa10.93□□□□□ -0.66
ARHGEF28-206ENST00000504003 ADGRA1Q86SQ6 560 aa10.93□□□□□ -0.66
ARHGEF28-206ENST00000504003 GMLQ99445 158 aa10.93□□□□□ -0.66
ARHGEF28-206ENST00000504003 MYOZ2Q9NPC6 264 aa10.93□□□□□ -0.66
ARHGEF28-206ENST00000504003 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.93□□□□□ -0.66
ARHGEF28-206ENST00000504003 CNOT7Q9UIV1 285 aaKnown RBP10.93□□□□□ -0.66
ARHGEF28-206ENST00000504003 GOLGB1Q14789 3259 aaKnown RBP10.93□□□□□ -0.66
ARHGEF28-206ENST00000504003 ZNF646O15015 1829 aaPredicted RBP10.93□□□□□ -0.66
ARHGEF28-206ENST00000504003 COL4A5P29400 1685 aa10.92□□□□□ -0.66
ARHGEF28-206ENST00000504003 IQCA1LA6NCM1 817 aa10.92□□□□□ -0.66
ARHGEF28-206ENST00000504003 FGAP02671 866 aa10.92□□□□□ -0.66
ARHGEF28-206ENST00000504003 CHGBP05060 677 aa10.92□□□□□ -0.66
ARHGEF28-206ENST00000504003 POLR3DP05423 398 aaPredicted RBP10.92□□□□□ -0.66
ARHGEF28-206ENST00000504003 HLA-DOAP06340 250 aa10.92□□□□□ -0.66
ARHGEF28-206ENST00000504003 PCP11498 1178 aaKnown RBP10.92□□□□□ -0.66
ARHGEF28-206ENST00000504003 ZNF280AP59817 542 aaPredicted RBP10.92□□□□□ -0.66
ARHGEF28-206ENST00000504003 TNFAIP1Q13829 316 aa10.92□□□□□ -0.66
ARHGEF28-206ENST00000504003 NECTIN1Q15223 517 aa10.92□□□□□ -0.66
ARHGEF28-206ENST00000504003 GRIK5Q16478 980 aa10.92□□□□□ -0.66
ARHGEF28-206ENST00000504003 CREB3L3Q68CJ9 461 aa10.92□□□□□ -0.66
ARHGEF28-206ENST00000504003 TTC6Q86TZ1 520 aa10.92□□□□□ -0.66
ARHGEF28-206ENST00000504003 SH3RF3Q8TEJ3 882 aaPredicted RBP10.92□□□□□ -0.66
ARHGEF28-206ENST00000504003 ZNF384Q8TF68 577 aa10.92□□□□□ -0.66
ARHGEF28-206ENST00000504003 TGFBRAP1Q8WUH2 860 aa10.92□□□□□ -0.66
ARHGEF28-206ENST00000504003 DHX36Q9H2U1 1008 aaKnown RBP10.92□□□□□ -0.66
ARHGEF28-206ENST00000504003 CNNM2Q9H8M5 875 aa10.92□□□□□ -0.66
ARHGEF28-206ENST00000504003 GSG1L2A8MUP6 293 aa10.91□□□□□ -0.66
ARHGEF28-206ENST00000504003 PDE4BQ07343 736 aa10.91□□□□□ -0.66
ARHGEF28-206ENST00000504003 RABEP1Q15276 862 aa10.91□□□□□ -0.66
ARHGEF28-206ENST00000504003 VPS53Q5VIR6 699 aa10.91□□□□□ -0.66
ARHGEF28-206ENST00000504003 APOBEC3HQ6NTF7 200 aaKnown RBP10.91□□□□□ -0.66
ARHGEF28-206ENST00000504003 CDC42EP5Q6NZY7 148 aa10.91□□□□□ -0.66
ARHGEF28-206ENST00000504003 MFSD6Q6ZSS7 791 aa10.91□□□□□ -0.66
ARHGEF28-206ENST00000504003 RALYLQ86SE5 291 aaKnown RBP10.91□□□□□ -0.66
ARHGEF28-206ENST00000504003 SDR42E1Q8WUS8 393 aa10.91□□□□□ -0.66
ARHGEF28-206ENST00000504003 ZNF516Q92618 1163 aa10.91□□□□□ -0.66
ARHGEF28-206ENST00000504003 TRIM34Q9BYJ4 488 aa10.91□□□□□ -0.66
ARHGEF28-206ENST00000504003 IL25Q9H293 177 aa10.91□□□□□ -0.66
ARHGEF28-206ENST00000504003 DCP1AQ9NPI6 582 aaPredicted RBP10.91□□□□□ -0.66
ARHGEF28-206ENST00000504003 MCM9Q9NXL9 1143 aa10.91□□□□□ -0.66
ARHGEF28-206ENST00000504003 GPRC5DQ9NZD1 345 aa10.91□□□□□ -0.66
ARHGEF28-206ENST00000504003 DAXXQ9UER7 740 aaPredicted RBP10.91□□□□□ -0.66
ARHGEF28-206ENST00000504003 ECM29Q5VYK3 1845 aa10.91□□□□□ -0.66
ARHGEF28-206ENST00000504003 ZNF541Q9H0D2 1346 aa10.9□□□□□ -0.66
ARHGEF28-206ENST00000504003 NAV1Q8NEY1 1877 aa10.9□□□□□ -0.66
ARHGEF28-206ENST00000504003 GLTPD2A6NH11 291 aa10.9□□□□□ -0.66
ARHGEF28-206ENST00000504003 MINDY4BA8MYZ0 360 aa10.9□□□□□ -0.66
ARHGEF28-206ENST00000504003 SLC27A2O14975 620 aa10.9□□□□□ -0.66
ARHGEF28-206ENST00000504003 ENTPD3O75355 529 aa10.9□□□□□ -0.66
ARHGEF28-206ENST00000504003 PRELPP51888 382 aa10.9□□□□□ -0.66
ARHGEF28-206ENST00000504003 PICALMQ13492 652 aa10.9□□□□□ -0.66
ARHGEF28-206ENST00000504003 TSGA10IPQ3SY00 556 aa10.9□□□□□ -0.66
ARHGEF28-206ENST00000504003 SBK1Q52WX2 424 aa10.9□□□□□ -0.66
ARHGEF28-206ENST00000504003 FKBP1CQ5VVH2 108 aa10.9□□□□□ -0.66
ARHGEF28-206ENST00000504003 NCOA7Q8NI08 942 aa10.9□□□□□ -0.66
ARHGEF28-206ENST00000504003 HOOK2Q96ED9 719 aa10.9□□□□□ -0.66
ARHGEF28-206ENST00000504003 IDI2Q9BXS1 227 aa10.9□□□□□ -0.66
ARHGEF28-206ENST00000504003 KRT23Q9C075 422 aa10.9□□□□□ -0.66
ARHGEF28-206ENST00000504003 ADARB2Q9NS39 739 aaKnown RBP10.9□□□□□ -0.66
ARHGEF28-206ENST00000504003 CYP46A1Q9Y6A2 500 aa10.9□□□□□ -0.66
ARHGEF28-206ENST00000504003 FOCADQ5VW36 1801 aa10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 USP17L12C9JPN9 530 aa10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 USP17L21D6R901 530 aa10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 PRKAB2O43741 272 aa10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 DDNO94850 711 aaPredicted RBP10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 RHBDL3P58872 404 aa10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 COPS2P61201 443 aa10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 FGD1P98174 961 aa10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 PPARAQ07869 468 aa10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 BECN1Q14457 450 aa10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 KIF4BQ2VIQ3 1234 aa10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 RBM26Q5T8P6 1007 aaKnown RBP10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 APOBEC3FQ8IUX4 373 aaKnown RBP10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 MAPKAPK5Q8IW41 473 aa10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 ZSCAN29Q8IWY8 852 aaPredicted RBP10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 PRMT6Q96LA8 375 aaPredicted RBP10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 NEK1Q96PY6 1258 aa10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 TM6SF1Q9BZW5 370 aa10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 TDRD3Q9H7E2 651 aaKnown RBP10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 VEZTQ9HBM0 779 aa10.89□□□□□ -0.67
ARHGEF28-206ENST00000504003 TOMM22Q9NS69 142 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms