RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 CCDC196A0A1B0GTZ2 297 aa13.38□□□□□ -0.27
USP46-204ENST00000503060 CLCN1P35523 988 aa13.38□□□□□ -0.27
USP46-204ENST00000503060 TRIM29Q14134 588 aa13.38□□□□□ -0.27
USP46-204ENST00000503060 PROM2Q8N271 834 aa13.38□□□□□ -0.27
USP46-204ENST00000503060 FSIP1Q8NA03 581 aa13.38□□□□□ -0.27
USP46-204ENST00000503060 GPR101Q96P66 508 aaPredicted RBP13.38□□□□□ -0.27
USP46-204ENST00000503060 ZSCAN10Q96SZ4 725 aaPredicted RBP13.38□□□□□ -0.27
USP46-204ENST00000503060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.38□□□□□ -0.27
USP46-204ENST00000503060 KIAA1551Q9HCM1 1747 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 A0A1W2PQ27 194 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 A0A1W2PQ64 194 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 A0A1W2PQD8 194 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 POLRMTO00411 1230 aaKnown RBP13.37□□□□□ -0.27
USP46-204ENST00000503060 LDHBP07195 334 aaKnown RBP13.37□□□□□ -0.27
USP46-204ENST00000503060 ATP2B4P23634 1241 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 FAM160A1Q05DH4 1040 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 SNW1Q13573 536 aaKnown RBP13.37□□□□□ -0.27
USP46-204ENST00000503060 SF3A1Q15459 793 aaKnown RBP13.37□□□□□ -0.27
USP46-204ENST00000503060 ANO1Q5XXA6 986 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 ADALQ6DHV7 355 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 ZSCAN30Q86W11 494 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 ENAHQ8N8S7 591 aaPredicted RBP13.37□□□□□ -0.27
USP46-204ENST00000503060 FANCBQ8NB91 859 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 ENGASEQ8NFI3 743 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 USP25Q9UHP3 1055 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 UBE2Q2LH0YL09 131 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 SPTLC2O15270 562 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 ORC4O43929 436 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 PRDM1O75626 825 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 HMGB2P26583 209 aaKnown RBP13.37□□□□□ -0.27
USP46-204ENST00000503060 HOXA10P31260 410 aaPredicted RBP13.37□□□□□ -0.27
USP46-204ENST00000503060 SBK1Q52WX2 424 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 TRIM22Q8IYM9 498 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 FAM200AQ8TCP9 573 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 NUP133Q8WUM0 1156 aa13.37□□□□□ -0.27
USP46-204ENST00000503060 ARPP21Q9UBL0 812 aaPredicted RBP13.37□□□□□ -0.27
USP46-204ENST00000503060 CTAGE5O15320 804 aa13.36□□□□□ -0.27
USP46-204ENST00000503060 BBOX1O75936 387 aa13.36□□□□□ -0.27
USP46-204ENST00000503060 UFL1O94874 794 aa13.36□□□□□ -0.27
USP46-204ENST00000503060 NBPF9Q3BBW0 867 aa13.36□□□□□ -0.27
USP46-204ENST00000503060 ARMCX6Q7L4S7 300 aa13.36□□□□□ -0.27
USP46-204ENST00000503060 CRACR2BQ8N4Y2 399 aaPredicted RBP13.36□□□□□ -0.27
USP46-204ENST00000503060 MRPS27Q92552 414 aaKnown RBP13.36□□□□□ -0.27
USP46-204ENST00000503060 GGA1Q9UJY5 639 aa13.36□□□□□ -0.27
USP46-204ENST00000503060 LAMB1P07942 1786 aa13.36□□□□□ -0.27
USP46-204ENST00000503060 MYH2Q9UKX2 1941 aa13.36□□□□□ -0.27
USP46-204ENST00000503060 RIOK3O14730 519 aaKnown RBP13.35□□□□□ -0.27
USP46-204ENST00000503060 KINO60870 393 aaKnown RBP13.35□□□□□ -0.27
USP46-204ENST00000503060 SLC3A2P08195 630 aaKnown RBP13.35□□□□□ -0.27
USP46-204ENST00000503060 CYP2D6P10635 497 aa13.35□□□□□ -0.27
USP46-204ENST00000503060 U2AF2P26368 475 aaKnown RBP eCLIP13.35□□□□□ -0.27
USP46-204ENST00000503060 GUCY1A2P33402 732 aa13.35□□□□□ -0.27
USP46-204ENST00000503060 GSTO1P78417 241 aa13.35□□□□□ -0.27
USP46-204ENST00000503060 EVX2Q03828 476 aa13.35□□□□□ -0.27
USP46-204ENST00000503060 GNL2Q13823 731 aaKnown RBP13.35□□□□□ -0.27
USP46-204ENST00000503060 PPP2R5BQ15173 497 aa13.35□□□□□ -0.27
USP46-204ENST00000503060 SASS6Q6UVJ0 657 aa13.35□□□□□ -0.27
USP46-204ENST00000503060 IQCA1Q86XH1 822 aa13.35□□□□□ -0.27
USP46-204ENST00000503060 CRAMP1Q96RY5 1269 aa13.35□□□□□ -0.27
USP46-204ENST00000503060 CCDC39Q9UFE4 941 aa13.35□□□□□ -0.27
USP46-204ENST00000503060 KLRG2A4D1S0 409 aaPredicted RBP13.35□□□□□ -0.27
USP46-204ENST00000503060 DEXIO95424 95 aa13.35□□□□□ -0.27
USP46-204ENST00000503060 ANO6Q4KMQ2 910 aa13.35□□□□□ -0.27
USP46-204ENST00000503060 IFIT1BQ5T764 474 aaKnown RBP13.35□□□□□ -0.27
USP46-204ENST00000503060 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.35□□□□□ -0.27
USP46-204ENST00000503060 CD209Q9NNX6 404 aa13.35□□□□□ -0.27
USP46-204ENST00000503060 NRDCO43847 1150 aa13.34□□□□□ -0.27
USP46-204ENST00000503060 ADCY5O95622 1261 aa13.34□□□□□ -0.27
USP46-204ENST00000503060 GRIK5Q16478 980 aa13.34□□□□□ -0.27
USP46-204ENST00000503060 DLEC1Q9Y238 1755 aa13.34□□□□□ -0.27
USP46-204ENST00000503060 SLC39A14Q15043 492 aa13.34□□□□□ -0.27
USP46-204ENST00000503060 CATIPQ7Z7H3 387 aa13.34□□□□□ -0.27
USP46-204ENST00000503060 FMR1NBQ8N0W7 255 aaPredicted RBP13.34□□□□□ -0.27
USP46-204ENST00000503060 CMTR1Q8N1G2 835 aaKnown RBP13.34□□□□□ -0.27
USP46-204ENST00000503060 IGSF5Q9NSI5 407 aa13.34□□□□□ -0.27
USP46-204ENST00000503060 NOL7Q9UMY1 257 aaKnown RBP13.34□□□□□ -0.27
USP46-204ENST00000503060 ANKRD62A6NC57 917 aa13.33□□□□□ -0.27
USP46-204ENST00000503060 MMP1P03956 469 aa13.33□□□□□ -0.27
USP46-204ENST00000503060 LDHCP07864 332 aa13.33□□□□□ -0.27
USP46-204ENST00000503060 IL1R1P14778 569 aa13.33□□□□□ -0.27
USP46-204ENST00000503060 PPP4CP60510 307 aa13.33□□□□□ -0.27
USP46-204ENST00000503060 DIXDC1Q155Q3 683 aa13.33□□□□□ -0.27
USP46-204ENST00000503060 KRBA2Q6ZNG9 492 aa13.33□□□□□ -0.27
USP46-204ENST00000503060 MCM9Q9NXL9 1143 aa13.33□□□□□ -0.27
USP46-204ENST00000503060 MKRN1Q9UHC7 482 aaKnown RBP13.33□□□□□ -0.27
USP46-204ENST00000503060 A0A1B0GVL5 298 aa13.33□□□□□ -0.28
USP46-204ENST00000503060 IRF6O14896 467 aa13.33□□□□□ -0.28
USP46-204ENST00000503060 BAG3O95817 575 aa13.33□□□□□ -0.28
USP46-204ENST00000503060 USP17L8P0C7I0 530 aa13.33□□□□□ -0.28
USP46-204ENST00000503060 POLD1P28340 1107 aa13.33□□□□□ -0.28
USP46-204ENST00000503060 USP5P45974 858 aa13.33□□□□□ -0.28
USP46-204ENST00000503060 RBM6P78332 1123 aaKnown RBP13.33□□□□□ -0.28
USP46-204ENST00000503060 PDE4BQ07343 736 aa13.33□□□□□ -0.28
USP46-204ENST00000503060 SAFBQ15424 915 aaKnown RBP eCLIP13.33□□□□□ -0.28
USP46-204ENST00000503060 ZNF827Q17R98 1081 aa13.33□□□□□ -0.28
USP46-204ENST00000503060 SH3RF3Q8TEJ3 882 aaPredicted RBP13.33□□□□□ -0.28
USP46-204ENST00000503060 TSPAN18Q96SJ8 248 aa13.33□□□□□ -0.28
USP46-204ENST00000503060 RNF26Q9BY78 433 aaPredicted RBP13.33□□□□□ -0.28
USP46-204ENST00000503060 CBX8Q9HC52 389 aa13.33□□□□□ -0.28
USP46-204ENST00000503060 DDAH1O94760 285 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms