RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 ZSCAN10Q96SZ4 725 aaPredicted RBP8.56□□□□□ -1.04
CPNE4-202ENST00000502818 PSMD1Q99460 953 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 GZF1Q9H116 711 aaPredicted RBP8.56□□□□□ -1.04
CPNE4-202ENST00000502818 RNF41Q9H4P4 317 aaPredicted RBP8.56□□□□□ -1.04
CPNE4-202ENST00000502818 SCAF8Q9UPN6 1271 aaKnown RBP8.56□□□□□ -1.04
CPNE4-202ENST00000502818 CDK5RAP2Q96SN8 1893 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 WDR33Q9C0J8 1336 aaKnown RBP8.56□□□□□ -1.04
CPNE4-202ENST00000502818 FAM196BA6NMK8 535 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 ORC4O43929 436 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 TRAK2O60296 914 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 GADD45BO75293 160 aaPredicted RBP8.56□□□□□ -1.04
CPNE4-202ENST00000502818 RASA1P20936 1047 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 LIFRP42702 1097 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 METAP2P50579 478 aaKnown RBP eCLIP8.56□□□□□ -1.04
CPNE4-202ENST00000502818 RBM5P52756 815 aaKnown RBP eCLIP8.56□□□□□ -1.04
CPNE4-202ENST00000502818 DNM1Q05193 864 aaKnown RBP8.56□□□□□ -1.04
CPNE4-202ENST00000502818 TCP10Q12799 353 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 CC2D2BQ6DHV5 1058 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 RCSD1Q6JBY9 416 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 SH3BP5LQ7L8J4 393 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 RTKN2Q8IZC4 609 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 NUP133Q8WUM0 1156 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 TEKT1Q969V4 418 aa8.56□□□□□ -1.04
CPNE4-202ENST00000502818 PRMT6Q96LA8 375 aaPredicted RBP8.56□□□□□ -1.04
CPNE4-202ENST00000502818 NOL10Q9BSC4 688 aaKnown RBP8.56□□□□□ -1.04
CPNE4-202ENST00000502818 hCG_1642624A0A1W2PR95 340 aa8.55□□□□□ -1.04
CPNE4-202ENST00000502818 FSD2A1L4K1 749 aa8.55□□□□□ -1.04
CPNE4-202ENST00000502818 GOLGA8AA7E2F4 631 aa8.55□□□□□ -1.04
CPNE4-202ENST00000502818 ZBTB43O43298 467 aa8.55□□□□□ -1.04
CPNE4-202ENST00000502818 CDK8P49336 464 aa8.55□□□□□ -1.04
CPNE4-202ENST00000502818 TFAP4Q01664 338 aa8.55□□□□□ -1.04
CPNE4-202ENST00000502818 HHIPL2Q6UWX4 724 aa8.55□□□□□ -1.04
CPNE4-202ENST00000502818 CLEC10AQ8IUN9 316 aa8.55□□□□□ -1.04
CPNE4-202ENST00000502818 SHISA4Q96DD7 197 aa8.55□□□□□ -1.04
CPNE4-202ENST00000502818 GBP4Q96PP9 640 aa8.55□□□□□ -1.04
CPNE4-202ENST00000502818 TDRD3Q9H7E2 651 aaKnown RBP8.55□□□□□ -1.04
CPNE4-202ENST00000502818 FAM198AQ9UFP1 575 aa8.55□□□□□ -1.04
CPNE4-202ENST00000502818 SUGT1Q9Y2Z0 365 aa8.55□□□□□ -1.04
CPNE4-202ENST00000502818 SLC12A7Q9Y666 1083 aa8.55□□□□□ -1.04
CPNE4-202ENST00000502818 DDTLA6NHG4 134 aaPredicted RBP8.54□□□□□ -1.04
CPNE4-202ENST00000502818 CCDC69A6NI79 296 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 PLEKHA8P1O95397 391 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 IARSP41252 1262 aaKnown RBP8.54□□□□□ -1.04
CPNE4-202ENST00000502818 CFAP100Q494V2 611 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 ZNF654Q8IZM8 581 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 SUPT20HQ8NEM7 779 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 GPT2Q8TD30 523 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 ZDHHC15Q96MV8 337 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 GMLQ99445 158 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 LLPHQ9BRT6 129 aaKnown RBP8.54□□□□□ -1.04
CPNE4-202ENST00000502818 UBAC1Q9BSL1 405 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.54□□□□□ -1.04
CPNE4-202ENST00000502818 FTOQ9C0B1 505 aaKnown RBP eCLIP8.54□□□□□ -1.04
CPNE4-202ENST00000502818 DDX60LQ5H9U9 1706 aaKnown RBP8.54□□□□□ -1.04
CPNE4-202ENST00000502818 ROBO3Q96MS0 1386 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 NAV1Q8NEY1 1877 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 TSPY2A6NKD2 308 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 EGFRP00533 1210 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 VIL1P09327 827 aaKnown RBP8.54□□□□□ -1.04
CPNE4-202ENST00000502818 XRCC6P12956 609 aaKnown RBP eCLIP8.54□□□□□ -1.04
CPNE4-202ENST00000502818 VEGFAP15692 232 aaPredicted RBP8.54□□□□□ -1.04
CPNE4-202ENST00000502818 CXCL9Q07325 125 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 RESTQ13127 1097 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 RSBN1LQ6PCB5 846 aaPredicted RBP8.54□□□□□ -1.04
CPNE4-202ENST00000502818 TMED8Q6PL24 325 aaPredicted RBP8.54□□□□□ -1.04
CPNE4-202ENST00000502818 C16orf86Q6ZW13 317 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 NBPF11Q86T75 865 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 USP48Q86UV5 1035 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 DNAJC18Q9H819 358 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 RBM27Q9P2N5 1060 aaKnown RBP8.54□□□□□ -1.04
CPNE4-202ENST00000502818 TFIP11Q9UBB9 837 aaKnown RBP8.54□□□□□ -1.04
CPNE4-202ENST00000502818 ORC3Q9UBD5 711 aaPredicted RBP8.54□□□□□ -1.04
CPNE4-202ENST00000502818 LAMB1P07942 1786 aa8.54□□□□□ -1.04
CPNE4-202ENST00000502818 CLRN2A0PK11 232 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 GOLGA6L3A6NEY3 463 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 KIF28PB7ZC32 967 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 FKBP1AP62942 108 aaKnown RBP8.53□□□□□ -1.04
CPNE4-202ENST00000502818 GABPAQ06546 454 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 PDE4BQ07343 736 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 SLC35G1Q2M3R5 365 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 IFIT1BQ5T764 474 aaKnown RBP8.53□□□□□ -1.04
CPNE4-202ENST00000502818 IFFO2Q5TF58 517 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 SLF2Q8IX21 1173 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 FAM184AQ8NB25 1140 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 OSBPL5Q9H0X9 879 aaPredicted RBP8.53□□□□□ -1.04
CPNE4-202ENST00000502818 MKNK2Q9HBH9 465 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 MTMR7Q9Y216 660 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 CD2APQ9Y5K6 639 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 BRCA1P38398 1863 aaKnown RBP8.53□□□□□ -1.04
CPNE4-202ENST00000502818 DDX11L8A8MPP1 907 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 CPLX1O14810 134 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 FIBPO43427 364 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 AKR1B1P15121 316 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 PLCG2P16885 1265 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 FUT2Q10981 343 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 TROAPQ12815 778 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 FANCBQ8NB91 859 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 SLC26A6Q9BXS9 759 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 TAOK3Q9H2K8 898 aa8.53□□□□□ -1.04
CPNE4-202ENST00000502818 ZNRF3Q9ULT6 936 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms