RNA–Protein interactions for RNA: ENST00000498787.1

PARP1-209, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 628 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-209ENST00000498787 CDK8P49336 464 aa16.91■□□□□ 0.3
PARP1-209ENST00000498787 CDC42EP5Q6NZY7 148 aa16.91■□□□□ 0.3
PARP1-209ENST00000498787 RSBN1LQ6PCB5 846 aaPredicted RBP16.91■□□□□ 0.3
PARP1-209ENST00000498787 CDC37L1Q7L3B6 337 aa16.91■□□□□ 0.3
PARP1-209ENST00000498787 BRAPQ7Z569 592 aa16.91■□□□□ 0.3
PARP1-209ENST00000498787 AGBL3Q8NEM8 1001 aa16.91■□□□□ 0.3
PARP1-209ENST00000498787 FBXO18Q8NFZ0 1043 aa16.91■□□□□ 0.3
PARP1-209ENST00000498787 NUP133Q8WUM0 1156 aa16.91■□□□□ 0.3
PARP1-209ENST00000498787 IDI2Q9BXS1 227 aa16.91■□□□□ 0.3
PARP1-209ENST00000498787 EHD4Q9H223 541 aa16.91■□□□□ 0.3
PARP1-209ENST00000498787 TAOK3Q9H2K8 898 aa16.91■□□□□ 0.3
PARP1-209ENST00000498787 SAP30BPQ9UHR5 308 aaKnown RBP16.91■□□□□ 0.3
PARP1-209ENST00000498787 ISY1Q9ULR0 285 aaKnown RBP16.91■□□□□ 0.3
PARP1-209ENST00000498787 WDHD1O75717 1129 aaPredicted RBP16.9■□□□□ 0.3
PARP1-209ENST00000498787 DEXIO95424 95 aa16.9■□□□□ 0.3
PARP1-209ENST00000498787 FDPSP14324 419 aaKnown RBP16.9■□□□□ 0.3
PARP1-209ENST00000498787 TNIP1Q15025 636 aa16.9■□□□□ 0.3
PARP1-209ENST00000498787 KLHL34Q8N239 644 aa16.9■□□□□ 0.3
PARP1-209ENST00000498787 NEDD1Q8NHV4 660 aa16.9■□□□□ 0.3
PARP1-209ENST00000498787 ALG1Q9BT22 464 aa16.9■□□□□ 0.3
PARP1-209ENST00000498787 RNF26Q9BY78 433 aaPredicted RBP16.9■□□□□ 0.3
PARP1-209ENST00000498787 OSBPL5Q9H0X9 879 aaPredicted RBP16.9■□□□□ 0.3
PARP1-209ENST00000498787 ELP1O95163 1332 aa16.9■□□□□ 0.3
PARP1-209ENST00000498787 CHD4Q14839 1912 aa16.9■□□□□ 0.3
PARP1-209ENST00000498787 ENTPD3O75355 529 aa16.89■□□□□ 0.29
PARP1-209ENST00000498787 RASA1P20936 1047 aa16.89■□□□□ 0.29
PARP1-209ENST00000498787 CDC27P30260 824 aa16.89■□□□□ 0.29
PARP1-209ENST00000498787 PLCD1P51178 756 aa16.89■□□□□ 0.29
PARP1-209ENST00000498787 UBE2HP62256 183 aa16.89■□□□□ 0.29
PARP1-209ENST00000498787 RESTQ13127 1097 aa16.89■□□□□ 0.29
PARP1-209ENST00000498787 PICALMQ13492 652 aa16.89■□□□□ 0.29
PARP1-209ENST00000498787 SAFBQ15424 915 aaKnown RBP eCLIP16.89■□□□□ 0.29
PARP1-209ENST00000498787 NTRK3Q16288 839 aa16.89■□□□□ 0.29
PARP1-209ENST00000498787 FAM47AQ5JRC9 791 aa16.89■□□□□ 0.29
PARP1-209ENST00000498787 CCDC17Q96LX7 622 aa16.89■□□□□ 0.29
PARP1-209ENST00000498787 SGIP1Q9BQI5 828 aa16.89■□□□□ 0.29
PARP1-209ENST00000498787 LZTS2Q9BRK4 669 aa16.89■□□□□ 0.29
PARP1-209ENST00000498787 MXD3Q9BW11 206 aa16.89■□□□□ 0.29
PARP1-209ENST00000498787 SENP2Q9HC62 589 aa16.89■□□□□ 0.29
PARP1-209ENST00000498787 PPP1R1BQ9UD71 204 aaPredicted RBP16.89■□□□□ 0.29
PARP1-209ENST00000498787 SERPINB13Q9UIV8 391 aa16.89■□□□□ 0.29
PARP1-209ENST00000498787 LTBP3Q9NS15 1303 aa16.89■□□□□ 0.29
PARP1-209ENST00000498787 LAMB1P07942 1786 aa16.89■□□□□ 0.29
PARP1-209ENST00000498787 YDJCA8MPS7 323 aa16.88■□□□□ 0.29
PARP1-209ENST00000498787 DNM1Q05193 864 aaKnown RBP16.88■□□□□ 0.29
PARP1-209ENST00000498787 USP48Q86UV5 1035 aa16.88■□□□□ 0.29
PARP1-209ENST00000498787 FOXP4Q8IVH2 680 aaPredicted RBP16.88■□□□□ 0.29
PARP1-209ENST00000498787 CRACR2BQ8N4Y2 399 aaPredicted RBP16.88■□□□□ 0.29
PARP1-209ENST00000498787 DYNLL2Q96FJ2 89 aa16.88■□□□□ 0.29
PARP1-209ENST00000498787 SLC26A6Q9BXS9 759 aa16.88■□□□□ 0.29
PARP1-209ENST00000498787 TRIM34Q9BYJ4 488 aa16.88■□□□□ 0.29
PARP1-209ENST00000498787 ZNF277Q9NRM2 450 aaPredicted RBP16.88■□□□□ 0.29
PARP1-209ENST00000498787 FAM217BQ9NTX9 383 aaPredicted RBP16.88■□□□□ 0.29
PARP1-209ENST00000498787 GOLGA6L4A6NEF3 574 aa16.87■□□□□ 0.29
PARP1-209ENST00000498787 TROAPQ12815 778 aa16.87■□□□□ 0.29
PARP1-209ENST00000498787 GNL2Q13823 731 aaKnown RBP16.87■□□□□ 0.29
PARP1-209ENST00000498787 CFAP100Q494V2 611 aa16.87■□□□□ 0.29
PARP1-209ENST00000498787 FERMT3Q86UX7 667 aa16.87■□□□□ 0.29
PARP1-209ENST00000498787 RAB11FIP4Q86YS3 637 aa16.87■□□□□ 0.29
PARP1-209ENST00000498787 FAM177A1Q8N128 213 aaPredicted RBP16.87■□□□□ 0.29
PARP1-209ENST00000498787 NKX2-3Q8TAU0 364 aa16.87■□□□□ 0.29
PARP1-209ENST00000498787 MYL10Q9BUA6 226 aa16.87■□□□□ 0.29
PARP1-209ENST00000498787 KCNQ5Q9NR82 932 aa16.87■□□□□ 0.29
PARP1-209ENST00000498787 PI4KBQ9UBF8 816 aa16.87■□□□□ 0.29
PARP1-209ENST00000498787 CNPY2Q9Y2B0 182 aa16.87■□□□□ 0.29
PARP1-209ENST00000498787 NAV1Q8NEY1 1877 aa16.86■□□□□ 0.29
PARP1-209ENST00000498787 PRPF3O43395 683 aaKnown RBP16.86■□□□□ 0.29
PARP1-209ENST00000498787 RXRAP19793 462 aa16.86■□□□□ 0.29
PARP1-209ENST00000498787 RPS12P25398 132 aaKnown RBP16.86■□□□□ 0.29
PARP1-209ENST00000498787 GABPAQ06546 454 aa16.86■□□□□ 0.29
PARP1-209ENST00000498787 DLGAP5Q15398 846 aa16.86■□□□□ 0.29
PARP1-209ENST00000498787 CIAPIN1Q6FI81 312 aa16.86■□□□□ 0.29
PARP1-209ENST00000498787 CCDC144CPQ8IYA2 1237 aa16.86■□□□□ 0.29
PARP1-209ENST00000498787 MTMR14Q8NCE2 650 aa16.86■□□□□ 0.29
PARP1-209ENST00000498787 PNMA1Q8ND90 353 aa16.86■□□□□ 0.29
PARP1-209ENST00000498787 SPON1Q9HCB6 807 aa16.86■□□□□ 0.29
PARP1-209ENST00000498787 PLIN4Q96Q06 1357 aa16.86■□□□□ 0.29
PARP1-209ENST00000498787 PSMD14O00487 310 aa16.85■□□□□ 0.29
PARP1-209ENST00000498787 FIBPO43427 364 aa16.85■□□□□ 0.29
PARP1-209ENST00000498787 MYO1BO43795 1136 aa16.85■□□□□ 0.29
PARP1-209ENST00000498787 TOP1P11387 765 aaKnown RBP16.85■□□□□ 0.29
PARP1-209ENST00000498787 FOXD4L6Q3SYB3 417 aaPredicted RBP16.85■□□□□ 0.29
PARP1-209ENST00000498787 FOXD4L3Q6VB84 417 aaPredicted RBP16.85■□□□□ 0.29
PARP1-209ENST00000498787 TMTC3Q6ZXV5 915 aa16.85■□□□□ 0.29
PARP1-209ENST00000498787 SPATA32Q96LK8 384 aa16.85■□□□□ 0.29
PARP1-209ENST00000498787 GMLQ99445 158 aa16.85■□□□□ 0.29
PARP1-209ENST00000498787 BAZ2AQ9UIF9 1905 aaKnown RBP16.85■□□□□ 0.29
PARP1-209ENST00000498787 SMIM22K7EJ46 135 aa16.84■□□□□ 0.29
PARP1-209ENST00000498787 RAD17O75943 681 aa16.84■□□□□ 0.29
PARP1-209ENST00000498787 LETM1O95202 739 aaPredicted RBP16.84■□□□□ 0.29
PARP1-209ENST00000498787 SMARCA1P28370 1054 aa16.84■□□□□ 0.29
PARP1-209ENST00000498787 FKBP1CQ5VVH2 108 aa16.84■□□□□ 0.29
PARP1-209ENST00000498787 KRT40Q6A162 431 aa16.84■□□□□ 0.29
PARP1-209ENST00000498787 PHKBQ93100 1093 aa16.84■□□□□ 0.29
PARP1-209ENST00000498787 BRMS1Q9HCU9 246 aa16.84■□□□□ 0.29
PARP1-209ENST00000498787 DDX4Q9NQI0 724 aaKnown RBP16.84■□□□□ 0.29
PARP1-209ENST00000498787 BCS1LQ9Y276 419 aa16.84■□□□□ 0.29
PARP1-209ENST00000498787 COL2A1P02458 1487 aaPredicted RBP16.84■□□□□ 0.29
PARP1-209ENST00000498787 PTGER2P43116 358 aa16.83■□□□□ 0.28
PARP1-209ENST00000498787 NOVP48745 357 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms