RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 PNMA3Q9UL41 463 aa11.47□□□□□ -0.57
HMGCL-207ENST00000498698 PCDHB15Q9Y5E8 787 aa11.47□□□□□ -0.57
HMGCL-207ENST00000498698 MYPNQ86TC9 1320 aa11.46□□□□□ -0.57
HMGCL-207ENST00000498698 USP17L10C9JJH3 530 aa11.46□□□□□ -0.57
HMGCL-207ENST00000498698 HOXA7P31268 230 aaPredicted RBP11.46□□□□□ -0.57
HMGCL-207ENST00000498698 GCLCP48506 637 aaPredicted RBP11.46□□□□□ -0.57
HMGCL-207ENST00000498698 PRKCZQ05513 592 aa11.46□□□□□ -0.57
HMGCL-207ENST00000498698 GABPAQ06546 454 aa11.46□□□□□ -0.57
HMGCL-207ENST00000498698 FAM110CQ1W6H9 321 aa11.46□□□□□ -0.57
HMGCL-207ENST00000498698 LCORLQ8N3X6 602 aa11.46□□□□□ -0.57
HMGCL-207ENST00000498698 ANKRD13CQ8N6S4 541 aa11.46□□□□□ -0.57
HMGCL-207ENST00000498698 TMEM106CQ9BVX2 250 aa11.46□□□□□ -0.57
HMGCL-207ENST00000498698 ARMT1Q9H993 441 aa11.46□□□□□ -0.57
HMGCL-207ENST00000498698 GABRQQ9UN88 632 aa11.46□□□□□ -0.57
HMGCL-207ENST00000498698 DOCK2Q92608 1830 aa11.45□□□□□ -0.58
HMGCL-207ENST00000498698 PRKAB2O43741 272 aa11.45□□□□□ -0.58
HMGCL-207ENST00000498698 MYCP01106 439 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-207ENST00000498698 CHGBP05060 677 aa11.45□□□□□ -0.58
HMGCL-207ENST00000498698 POLR3DP05423 398 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-207ENST00000498698 GRK4P32298 578 aa11.45□□□□□ -0.58
HMGCL-207ENST00000498698 SHMT1P34896 483 aa11.45□□□□□ -0.58
HMGCL-207ENST00000498698 RRP1P56182 461 aaKnown RBP11.45□□□□□ -0.58
HMGCL-207ENST00000498698 EVX2Q03828 476 aa11.45□□□□□ -0.58
HMGCL-207ENST00000498698 UBE3CQ15386 1083 aa11.45□□□□□ -0.58
HMGCL-207ENST00000498698 CERKLQ49MI3 558 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-207ENST00000498698 RAET1EQ8TD07 263 aa11.45□□□□□ -0.58
HMGCL-207ENST00000498698 SDR42E1Q8WUS8 393 aa11.45□□□□□ -0.58
HMGCL-207ENST00000498698 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.45□□□□□ -0.58
HMGCL-207ENST00000498698 DCP1AQ9NPI6 582 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-207ENST00000498698 EMILIN3Q9NT22 766 aa11.45□□□□□ -0.58
HMGCL-207ENST00000498698 ECHDC1Q9NTX5 307 aa11.45□□□□□ -0.58
HMGCL-207ENST00000498698 MCM9Q9NXL9 1143 aa11.45□□□□□ -0.58
HMGCL-207ENST00000498698 TMOD4Q9NZQ9 345 aa11.45□□□□□ -0.58
HMGCL-207ENST00000498698 TNPO2O14787 897 aaKnown RBP11.44□□□□□ -0.58
HMGCL-207ENST00000498698 MBD4O95243 580 aa11.44□□□□□ -0.58
HMGCL-207ENST00000498698 CYP2D6P10635 497 aa11.44□□□□□ -0.58
HMGCL-207ENST00000498698 FLT3LGP49771 235 aa11.44□□□□□ -0.58
HMGCL-207ENST00000498698 MTFR1Q15390 333 aa11.44□□□□□ -0.58
HMGCL-207ENST00000498698 ABCB5Q2M3G0 1257 aa11.44□□□□□ -0.58
HMGCL-207ENST00000498698 P2RX7Q99572 595 aaKnown RBP11.44□□□□□ -0.58
HMGCL-207ENST00000498698 MORF4L1Q9UBU8 362 aa11.44□□□□□ -0.58
HMGCL-207ENST00000498698 AK9Q5TCS8 1911 aa11.44□□□□□ -0.58
HMGCL-207ENST00000498698 MAST2Q6P0Q8 1798 aa11.44□□□□□ -0.58
HMGCL-207ENST00000498698 ADCY3O60266 1144 aa11.43□□□□□ -0.58
HMGCL-207ENST00000498698 GUCY1A2P33402 732 aa11.43□□□□□ -0.58
HMGCL-207ENST00000498698 IRX3P78415 501 aaPredicted RBP11.43□□□□□ -0.58
HMGCL-207ENST00000498698 IRF5Q13568 498 aa11.43□□□□□ -0.58
HMGCL-207ENST00000498698 RAB3GAP1Q15042 981 aa11.43□□□□□ -0.58
HMGCL-207ENST00000498698 USP17L2Q6R6M4 530 aa11.43□□□□□ -0.58
HMGCL-207ENST00000498698 SLAIN1Q8ND83 568 aa11.43□□□□□ -0.58
HMGCL-207ENST00000498698 ACER1Q8TDN7 264 aa11.43□□□□□ -0.58
HMGCL-207ENST00000498698 C12orf42Q96LP6 360 aa11.43□□□□□ -0.58
HMGCL-207ENST00000498698 KIAA1683Q9H0B3 1180 aa11.43□□□□□ -0.58
HMGCL-207ENST00000498698 ATP8A2Q9NTI2 1148 aa11.43□□□□□ -0.58
HMGCL-207ENST00000498698 KIAA0100Q14667 2235 aaKnown RBP11.43□□□□□ -0.58
HMGCL-207ENST00000498698 HERVK_113P62684 666 aa11.42□□□□□ -0.58
HMGCL-207ENST00000498698 SEPT2Q15019 361 aa11.42□□□□□ -0.58
HMGCL-207ENST00000498698 PRPF38BQ5VTL8 546 aaKnown RBP11.42□□□□□ -0.58
HMGCL-207ENST00000498698 TSHZ3Q63HK5 1081 aa11.42□□□□□ -0.58
HMGCL-207ENST00000498698 ZSCAN25Q6NSZ9 544 aa11.42□□□□□ -0.58
HMGCL-207ENST00000498698 POTEEQ6S8J3 1075 aa11.42□□□□□ -0.58
HMGCL-207ENST00000498698 KBTBD3Q8NAB2 608 aa11.42□□□□□ -0.58
HMGCL-207ENST00000498698 SLC44A5Q8NCS7 719 aa11.42□□□□□ -0.58
HMGCL-207ENST00000498698 PXYLP1Q8TE99 480 aa11.42□□□□□ -0.58
HMGCL-207ENST00000498698 COA7Q96BR5 231 aa11.42□□□□□ -0.58
HMGCL-207ENST00000498698 PUS7LQ9H0K6 701 aaKnown RBP11.42□□□□□ -0.58
HMGCL-207ENST00000498698 TXNRD2Q9NNW7 524 aa11.42□□□□□ -0.58
HMGCL-207ENST00000498698 CABP5Q9NP86 173 aa11.42□□□□□ -0.58
HMGCL-207ENST00000498698 RBPJLQ9UBG7 517 aa11.42□□□□□ -0.58
HMGCL-207ENST00000498698 GJD2Q9UKL4 321 aa11.42□□□□□ -0.58
HMGCL-207ENST00000498698 TAOK2Q9UL54 1235 aa11.42□□□□□ -0.58
HMGCL-207ENST00000498698 DOCK1Q14185 1865 aa11.42□□□□□ -0.58
HMGCL-207ENST00000498698 PDE4DIPQ5VU43 2346 aa11.41□□□□□ -0.58
HMGCL-207ENST00000498698 CYP2D7A0A087X1C5 515 aa11.41□□□□□ -0.58
HMGCL-207ENST00000498698 USP17L12C9JPN9 530 aa11.41□□□□□ -0.58
HMGCL-207ENST00000498698 USP17L21D6R901 530 aa11.41□□□□□ -0.58
HMGCL-207ENST00000498698 SMIM22K7EJ46 135 aa11.41□□□□□ -0.58
HMGCL-207ENST00000498698 PEX10O60683 326 aa11.41□□□□□ -0.58
HMGCL-207ENST00000498698 GJB1P08034 283 aa11.41□□□□□ -0.58
HMGCL-207ENST00000498698 CCL5P13501 91 aa11.41□□□□□ -0.58
HMGCL-207ENST00000498698 ELNP15502 786 aa11.41□□□□□ -0.58
HMGCL-207ENST00000498698 ZYXQ15942 572 aaKnown RBP11.41□□□□□ -0.58
HMGCL-207ENST00000498698 C12orf60Q5U649 245 aa11.41□□□□□ -0.58
HMGCL-207ENST00000498698 GPRC5AQ8NFJ5 357 aa11.41□□□□□ -0.58
HMGCL-207ENST00000498698 DYNLL2Q96FJ2 89 aa11.41□□□□□ -0.58
HMGCL-207ENST00000498698 GPATCH3Q96I76 525 aa11.41□□□□□ -0.58
HMGCL-207ENST00000498698 CRBNQ96SW2 442 aa11.41□□□□□ -0.58
HMGCL-207ENST00000498698 FEZ1Q99689 392 aa11.41□□□□□ -0.58
HMGCL-207ENST00000498698 BIN2Q9UBW5 565 aaPredicted RBP11.41□□□□□ -0.58
HMGCL-207ENST00000498698 SWAP70Q9UH65 585 aa11.41□□□□□ -0.58
HMGCL-207ENST00000498698 SIPA1L1O43166 1804 aa11.41□□□□□ -0.58
HMGCL-207ENST00000498698 A0A1W2PRG0 241 aa11.4□□□□□ -0.58
HMGCL-207ENST00000498698 USP17L15C9J2P7 530 aa11.4□□□□□ -0.58
HMGCL-207ENST00000498698 USP17L13C9JLJ4 530 aa11.4□□□□□ -0.58
HMGCL-207ENST00000498698 USP17L11C9JVI0 530 aa11.4□□□□□ -0.58
HMGCL-207ENST00000498698 USP17L18D6R9N7 530 aa11.4□□□□□ -0.58
HMGCL-207ENST00000498698 USP17L22D6RA61 530 aa11.4□□□□□ -0.58
HMGCL-207ENST00000498698 USP17L17D6RBQ6 530 aa11.4□□□□□ -0.58
HMGCL-207ENST00000498698 USP17L19D6RCP7 530 aa11.4□□□□□ -0.58
HMGCL-207ENST00000498698 USP17L20D6RJB6 530 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms