RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 NAV1Q8NEY1 1877 aa13.45□□□□□ -0.26
LSAMP-206ENST00000498645 GJB1P08034 283 aa13.45□□□□□ -0.26
LSAMP-206ENST00000498645 GJA8P48165 433 aa13.45□□□□□ -0.26
LSAMP-206ENST00000498645 GCLCP48506 637 aaPredicted RBP13.45□□□□□ -0.26
LSAMP-206ENST00000498645 IRX3P78415 501 aaPredicted RBP13.45□□□□□ -0.26
LSAMP-206ENST00000498645 MAP3K12Q12852 859 aa13.45□□□□□ -0.26
LSAMP-206ENST00000498645 FOXP4Q8IVH2 680 aaPredicted RBP13.45□□□□□ -0.26
LSAMP-206ENST00000498645 H0YGN5 161 aa13.44□□□□□ -0.26
LSAMP-206ENST00000498645 BACE1P56817 501 aa13.44□□□□□ -0.26
LSAMP-206ENST00000498645 SH3D19Q5HYK7 790 aa13.44□□□□□ -0.26
LSAMP-206ENST00000498645 U2AF1L4Q8WU68 220 aaKnown RBP13.44□□□□□ -0.26
LSAMP-206ENST00000498645 WDR18Q9BV38 432 aa13.44□□□□□ -0.26
LSAMP-206ENST00000498645 ZBTB21Q9ULJ3 1066 aa13.44□□□□□ -0.26
LSAMP-206ENST00000498645 USP17L10C9JJH3 530 aa13.43□□□□□ -0.26
LSAMP-206ENST00000498645 PEX10O60683 326 aa13.43□□□□□ -0.26
LSAMP-206ENST00000498645 FARP2O94887 1054 aaPredicted RBP13.43□□□□□ -0.26
LSAMP-206ENST00000498645 MS4A1P11836 297 aa13.43□□□□□ -0.26
LSAMP-206ENST00000498645 IRF5Q13568 498 aa13.43□□□□□ -0.26
LSAMP-206ENST00000498645 ZYXQ15942 572 aaKnown RBP13.43□□□□□ -0.26
LSAMP-206ENST00000498645 HSP90AB4PQ58FF6 505 aa13.43□□□□□ -0.26
LSAMP-206ENST00000498645 RHPN1Q8TCX5 695 aa13.43□□□□□ -0.26
LSAMP-206ENST00000498645 PXYLP1Q8TE99 480 aa13.43□□□□□ -0.26
LSAMP-206ENST00000498645 DEFB118Q96PH6 123 aa13.43□□□□□ -0.26
LSAMP-206ENST00000498645 FEZ1Q99689 392 aa13.43□□□□□ -0.26
LSAMP-206ENST00000498645 COLQQ9Y215 455 aaPredicted RBP13.43□□□□□ -0.26
LSAMP-206ENST00000498645 COG6Q9Y2V7 657 aa13.43□□□□□ -0.26
LSAMP-206ENST00000498645 TRIOBPQ9H2D6 2365 aa13.43□□□□□ -0.26
LSAMP-206ENST00000498645 PLXNB2O15031 1838 aa13.42□□□□□ -0.26
LSAMP-206ENST00000498645 IGSF3O75054 1194 aa13.42□□□□□ -0.26
LSAMP-206ENST00000498645 GH2P01242 217 aa13.42□□□□□ -0.26
LSAMP-206ENST00000498645 TFRCP02786 760 aaKnown RBP13.42□□□□□ -0.26
LSAMP-206ENST00000498645 METTL16Q86W50 562 aaKnown RBP13.42□□□□□ -0.26
LSAMP-206ENST00000498645 CERS3Q8IU89 383 aa13.42□□□□□ -0.26
LSAMP-206ENST00000498645 DNAJC2Q99543 621 aaKnown RBP13.42□□□□□ -0.26
LSAMP-206ENST00000498645 P2RX7Q99572 595 aaKnown RBP13.42□□□□□ -0.26
LSAMP-206ENST00000498645 MAGEB6P1A0A0J9YX57 407 aa13.41□□□□□ -0.26
LSAMP-206ENST00000498645 C19orf81C9J6K1 198 aa13.41□□□□□ -0.26
LSAMP-206ENST00000498645 HMMRO75330 724 aa13.41□□□□□ -0.26
LSAMP-206ENST00000498645 SGPL1O95470 568 aa13.41□□□□□ -0.26
LSAMP-206ENST00000498645 IFIT2P09913 472 aaKnown RBP13.41□□□□□ -0.26
LSAMP-206ENST00000498645 HERVK_113P62684 666 aa13.41□□□□□ -0.26
LSAMP-206ENST00000498645 RAB3GAP1Q15042 981 aa13.41□□□□□ -0.26
LSAMP-206ENST00000498645 TTF1Q15361 905 aaPredicted RBP13.41□□□□□ -0.26
LSAMP-206ENST00000498645 CLASRPQ8N2M8 674 aaKnown RBP13.41□□□□□ -0.26
LSAMP-206ENST00000498645 PAGR1Q9BTK6 254 aa13.41□□□□□ -0.26
LSAMP-206ENST00000498645 HTATIP2Q9BUP3 242 aa13.41□□□□□ -0.26
LSAMP-206ENST00000498645 SERPINB13Q9UIV8 391 aa13.41□□□□□ -0.26
LSAMP-206ENST00000498645 DDX19BQ9UMR2 479 aa13.41□□□□□ -0.26
LSAMP-206ENST00000498645 DDX60LQ5H9U9 1706 aaKnown RBP13.41□□□□□ -0.26
LSAMP-206ENST00000498645 GOLIM4O00461 696 aa13.4□□□□□ -0.26
LSAMP-206ENST00000498645 SLC9C2Q5TAH2 1124 aa13.4□□□□□ -0.26
LSAMP-206ENST00000498645 USP17L2Q6R6M4 530 aa13.4□□□□□ -0.26
LSAMP-206ENST00000498645 CHRDL2Q6WN34 429 aa13.4□□□□□ -0.26
LSAMP-206ENST00000498645 TTC6Q86TZ1 520 aa13.4□□□□□ -0.26
LSAMP-206ENST00000498645 CCAR1Q8IX12 1150 aaKnown RBP13.4□□□□□ -0.26
LSAMP-206ENST00000498645 GPRC5AQ8NFJ5 357 aa13.4□□□□□ -0.26
LSAMP-206ENST00000498645 KIF1BPQ96EK5 621 aa13.4□□□□□ -0.26
LSAMP-206ENST00000498645 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.4□□□□□ -0.26
LSAMP-206ENST00000498645 TXNRD2Q9NNW7 524 aa13.4□□□□□ -0.26
LSAMP-206ENST00000498645 GINM1Q9NU53 330 aa13.4□□□□□ -0.26
LSAMP-206ENST00000498645 PCDH10Q9P2E7 1040 aa13.4□□□□□ -0.26
LSAMP-206ENST00000498645 MORF4L1Q9UBU8 362 aa13.4□□□□□ -0.26
LSAMP-206ENST00000498645 MYH8P13535 1937 aa13.4□□□□□ -0.26
LSAMP-206ENST00000498645 HMGCRP04035 888 aa13.39□□□□□ -0.27
LSAMP-206ENST00000498645 POLR3DP05423 398 aaPredicted RBP13.39□□□□□ -0.27
LSAMP-206ENST00000498645 PDE6AP16499 860 aa13.39□□□□□ -0.27
LSAMP-206ENST00000498645 CYP2B6P20813 491 aa13.39□□□□□ -0.27
LSAMP-206ENST00000498645 HOXA7P31268 230 aaPredicted RBP13.39□□□□□ -0.27
LSAMP-206ENST00000498645 TRIM32Q13049 653 aa13.39□□□□□ -0.27
LSAMP-206ENST00000498645 ABCB5Q2M3G0 1257 aa13.39□□□□□ -0.27
LSAMP-206ENST00000498645 CERKLQ49MI3 558 aaPredicted RBP13.39□□□□□ -0.27
LSAMP-206ENST00000498645 UBE2Q1Q7Z7E8 422 aa13.39□□□□□ -0.27
LSAMP-206ENST00000498645 RPAP2Q8IXW5 612 aaPredicted RBP13.39□□□□□ -0.27
LSAMP-206ENST00000498645 RIOK1Q9BRS2 568 aaKnown RBP13.39□□□□□ -0.27
LSAMP-206ENST00000498645 EHD4Q9H223 541 aa13.39□□□□□ -0.27
LSAMP-206ENST00000498645 CWC22Q9HCG8 908 aaKnown RBP13.39□□□□□ -0.27
LSAMP-206ENST00000498645 PAK6Q9NQU5 681 aaPredicted RBP13.39□□□□□ -0.27
LSAMP-206ENST00000498645 EMILIN3Q9NT22 766 aa13.39□□□□□ -0.27
LSAMP-206ENST00000498645 ZNF532Q9HCE3 1301 aa13.39□□□□□ -0.27
LSAMP-206ENST00000498645 FXR1P51114 621 aaKnown RBP eCLIP13.38□□□□□ -0.27
LSAMP-206ENST00000498645 PLCD1P51178 756 aa13.38□□□□□ -0.27
LSAMP-206ENST00000498645 PDE3AQ14432 1141 aa13.38□□□□□ -0.27
LSAMP-206ENST00000498645 TATDN1Q6P1N9 297 aa13.38□□□□□ -0.27
LSAMP-206ENST00000498645 SIRT2Q8IXJ6 389 aa13.38□□□□□ -0.27
LSAMP-206ENST00000498645 TRIB2Q92519 343 aa13.38□□□□□ -0.27
LSAMP-206ENST00000498645 EDC3Q96F86 508 aaKnown RBP13.38□□□□□ -0.27
LSAMP-206ENST00000498645 CRNKL1Q9BZJ0 848 aaKnown RBP13.38□□□□□ -0.27
LSAMP-206ENST00000498645 CABP5Q9NP86 173 aa13.38□□□□□ -0.27
LSAMP-206ENST00000498645 ZBTB40Q9NUA8 1239 aa13.38□□□□□ -0.27
LSAMP-206ENST00000498645 MCM9Q9NXL9 1143 aa13.38□□□□□ -0.27
LSAMP-206ENST00000498645 RCAN3Q9UKA8 241 aa13.38□□□□□ -0.27
LSAMP-206ENST00000498645 GJD2Q9UKL4 321 aa13.38□□□□□ -0.27
LSAMP-206ENST00000498645 MYH7P12883 1935 aa13.38□□□□□ -0.27
LSAMP-206ENST00000498645 BAZ2AQ9UIF9 1905 aaKnown RBP13.38□□□□□ -0.27
LSAMP-206ENST00000498645 ALPK3Q96L96 1907 aa13.37□□□□□ -0.27
LSAMP-206ENST00000498645 MPHOSPH10O00566 681 aaKnown RBP13.37□□□□□ -0.27
LSAMP-206ENST00000498645 ERVK-9P63128 1117 aa13.37□□□□□ -0.27
LSAMP-206ENST00000498645 ERVK-24P63145 666 aa13.37□□□□□ -0.27
LSAMP-206ENST00000498645 EVX2Q03828 476 aa13.37□□□□□ -0.27
LSAMP-206ENST00000498645 WDR78Q5VTH9 848 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms