RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 ZBTB21Q9ULJ3 1066 aa13.18□□□□□ -0.3
SHROOM3-210ENST00000497440 AGTPBP1Q9UPW5 1226 aa13.18□□□□□ -0.3
SHROOM3-210ENST00000497440 LOC285556D6RIA3 1793 aa13.17□□□□□ -0.3
SHROOM3-210ENST00000497440 C19orf81C9J6K1 198 aa13.17□□□□□ -0.3
SHROOM3-210ENST00000497440 PRKAB2O43741 272 aa13.17□□□□□ -0.3
SHROOM3-210ENST00000497440 GLRX3O76003 335 aaKnown RBP13.17□□□□□ -0.3
SHROOM3-210ENST00000497440 GUCY1A2P33402 732 aa13.17□□□□□ -0.3
SHROOM3-210ENST00000497440 USP5P45974 858 aa13.17□□□□□ -0.3
SHROOM3-210ENST00000497440 EVX2Q03828 476 aa13.17□□□□□ -0.3
SHROOM3-210ENST00000497440 C12orf60Q5U649 245 aa13.17□□□□□ -0.3
SHROOM3-210ENST00000497440 ZSCAN25Q6NSZ9 544 aa13.17□□□□□ -0.3
SHROOM3-210ENST00000497440 GIMAP6Q6P9H5 292 aa13.17□□□□□ -0.3
SHROOM3-210ENST00000497440 SDR42E1Q8WUS8 393 aa13.17□□□□□ -0.3
SHROOM3-210ENST00000497440 OSBP2Q969R2 916 aa13.17□□□□□ -0.3
SHROOM3-210ENST00000497440 ARMC5Q96C12 935 aa13.17□□□□□ -0.3
SHROOM3-210ENST00000497440 C12orf42Q96LP6 360 aa13.17□□□□□ -0.3
SHROOM3-210ENST00000497440 ARMT1Q9H993 441 aa13.17□□□□□ -0.3
SHROOM3-210ENST00000497440 EFCC1Q9HA90 598 aa13.17□□□□□ -0.3
SHROOM3-210ENST00000497440 SAP30BPQ9UHR5 308 aaKnown RBP13.17□□□□□ -0.3
SHROOM3-210ENST00000497440 TRIM17Q9Y577 477 aa13.17□□□□□ -0.3
SHROOM3-210ENST00000497440 TRIM75PA6NK02 468 aa13.16□□□□□ -0.3
SHROOM3-210ENST00000497440 ZFYP08048 801 aaPredicted RBP13.16□□□□□ -0.3
SHROOM3-210ENST00000497440 CYP2C8P10632 490 aa13.16□□□□□ -0.3
SHROOM3-210ENST00000497440 TREML2Q5T2D2 321 aa13.16□□□□□ -0.3
SHROOM3-210ENST00000497440 PARK7Q99497 189 aaKnown RBP13.16□□□□□ -0.3
SHROOM3-210ENST00000497440 AS3MTQ9HBK9 375 aa13.16□□□□□ -0.3
SHROOM3-210ENST00000497440 GSG1L2A8MUP6 293 aa13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 ERC2O15083 957 aa13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 RNF113AO15541 343 aaKnown RBP13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 MBD4O95243 580 aa13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 IGHDP01880 384 aa13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 MX1P20591 662 aa13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 PRMT2P55345 433 aa13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 ARHGEF6Q15052 776 aa13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 SBK1Q52WX2 424 aa13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 TSHZ3Q63HK5 1081 aa13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 POTEEQ6S8J3 1075 aa13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 SIAH1Q8IUQ4 282 aa13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 CRACR2BQ8N4Y2 399 aaPredicted RBP13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 EXOC6Q8TAG9 804 aa13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 APPBP2Q92624 585 aa13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 GPATCH3Q96I76 525 aa13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 OSBPL3Q9H4L5 887 aa13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 EMILIN3Q9NT22 766 aa13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 MCM9Q9NXL9 1143 aa13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 CPA4Q9UI42 421 aa13.15□□□□□ -0.3
SHROOM3-210ENST00000497440 PDE4DIPQ5VU43 2346 aa13.14□□□□□ -0.31
SHROOM3-210ENST00000497440 DOCK3Q8IZD9 2030 aa13.14□□□□□ -0.31
SHROOM3-210ENST00000497440 CCDC85CA6NKD9 419 aa13.14□□□□□ -0.31
SHROOM3-210ENST00000497440 USP17L10C9JJH3 530 aa13.14□□□□□ -0.31
SHROOM3-210ENST00000497440 SMIM22K7EJ46 135 aa13.14□□□□□ -0.31
SHROOM3-210ENST00000497440 CAPN15O75808 1086 aa13.14□□□□□ -0.31
SHROOM3-210ENST00000497440 GH2P01242 217 aa13.14□□□□□ -0.31
SHROOM3-210ENST00000497440 PDE1AP54750 535 aa13.14□□□□□ -0.31
SHROOM3-210ENST00000497440 HMGCS2P54868 508 aa13.14□□□□□ -0.31
SHROOM3-210ENST00000497440 CERKLQ49MI3 558 aaPredicted RBP13.14□□□□□ -0.31
SHROOM3-210ENST00000497440 ANKRD45Q5TZF3 282 aa13.14□□□□□ -0.31
SHROOM3-210ENST00000497440 TRIM47Q96LD4 638 aa13.14□□□□□ -0.31
SHROOM3-210ENST00000497440 ARHGAP39Q9C0H5 1083 aa13.14□□□□□ -0.31
SHROOM3-210ENST00000497440 KIAA1683Q9H0B3 1180 aa13.14□□□□□ -0.31
SHROOM3-210ENST00000497440 MORF4L1Q9UBU8 362 aa13.14□□□□□ -0.31
SHROOM3-210ENST00000497440 SWAP70Q9UH65 585 aa13.14□□□□□ -0.31
SHROOM3-210ENST00000497440 NAV1Q8NEY1 1877 aa13.13□□□□□ -0.31
SHROOM3-210ENST00000497440 USP17L12C9JPN9 530 aa13.13□□□□□ -0.31
SHROOM3-210ENST00000497440 USP17L21D6R901 530 aa13.13□□□□□ -0.31
SHROOM3-210ENST00000497440 GDF11O95390 407 aa13.13□□□□□ -0.31
SHROOM3-210ENST00000497440 GCLCP48506 637 aaPredicted RBP13.13□□□□□ -0.31
SHROOM3-210ENST00000497440 ZMYM1Q5SVZ6 1142 aa13.13□□□□□ -0.31
SHROOM3-210ENST00000497440 CTR9Q6PD62 1173 aa13.13□□□□□ -0.31
SHROOM3-210ENST00000497440 ASCC2Q9H1I8 757 aaPredicted RBP13.13□□□□□ -0.31
SHROOM3-210ENST00000497440 SUPT16HQ9Y5B9 1047 aaKnown RBP13.13□□□□□ -0.31
SHROOM3-210ENST00000497440 BAZ2AQ9UIF9 1905 aaKnown RBP13.12□□□□□ -0.31
SHROOM3-210ENST00000497440 FOXP2O15409 715 aa13.12□□□□□ -0.31
SHROOM3-210ENST00000497440 POLR3DP05423 398 aaPredicted RBP13.12□□□□□ -0.31
SHROOM3-210ENST00000497440 CYP2D6P10635 497 aa13.12□□□□□ -0.31
SHROOM3-210ENST00000497440 NUCB1Q02818 461 aa13.12□□□□□ -0.31
SHROOM3-210ENST00000497440 MTMR2Q13614 643 aa13.12□□□□□ -0.31
SHROOM3-210ENST00000497440 FAM110CQ1W6H9 321 aa13.12□□□□□ -0.31
SHROOM3-210ENST00000497440 ABCB5Q2M3G0 1257 aa13.12□□□□□ -0.31
SHROOM3-210ENST00000497440 LBX2Q6XYB7 198 aa13.12□□□□□ -0.31
SHROOM3-210ENST00000497440 GADL1Q6ZQY3 521 aa13.12□□□□□ -0.31
SHROOM3-210ENST00000497440 C16orf86Q6ZW13 317 aa13.12□□□□□ -0.31
SHROOM3-210ENST00000497440 ZNF333Q96JL9 665 aa13.12□□□□□ -0.31
SHROOM3-210ENST00000497440 CCDC17Q96LX7 622 aa13.12□□□□□ -0.31
SHROOM3-210ENST00000497440 RWDD1Q9H446 243 aaPredicted RBP13.12□□□□□ -0.31
SHROOM3-210ENST00000497440 SRRDQ9UH36 339 aa13.12□□□□□ -0.31
SHROOM3-210ENST00000497440 ZSWIM8A7E2V4 1837 aa13.11□□□□□ -0.31
SHROOM3-210ENST00000497440 ROBO3Q96MS0 1386 aa13.11□□□□□ -0.31
SHROOM3-210ENST00000497440 A0A1W2PRG0 241 aa13.11□□□□□ -0.31
SHROOM3-210ENST00000497440 GPAA1O43292 621 aa13.11□□□□□ -0.31
SHROOM3-210ENST00000497440 PSMC4P43686 418 aa13.11□□□□□ -0.31
SHROOM3-210ENST00000497440 CDK8P49336 464 aa13.11□□□□□ -0.31
SHROOM3-210ENST00000497440 PABPC4Q13310 644 aaKnown RBP eCLIP13.11□□□□□ -0.31
SHROOM3-210ENST00000497440 SLC4A8Q2Y0W8 1093 aa13.11□□□□□ -0.31
SHROOM3-210ENST00000497440 ACER1Q8TDN7 264 aa13.11□□□□□ -0.31
SHROOM3-210ENST00000497440 DYNLL2Q96FJ2 89 aa13.11□□□□□ -0.31
SHROOM3-210ENST00000497440 P2RX7Q99572 595 aaKnown RBP13.11□□□□□ -0.31
SHROOM3-210ENST00000497440 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.11□□□□□ -0.31
SHROOM3-210ENST00000497440 EPB41L4AQ9HCS5 686 aaPredicted RBP13.11□□□□□ -0.31
SHROOM3-210ENST00000497440 PNMA3Q9UL41 463 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms