RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 EMC10Q5UCC4 262 aa14.66□□□□□ -0.06
VEGFA-215ENST00000497139 CCDC129Q6ZRS4 1044 aa14.66□□□□□ -0.06
VEGFA-215ENST00000497139 KBTBD3Q8NAB2 608 aa14.66□□□□□ -0.06
VEGFA-215ENST00000497139 RIN2Q8WYP3 895 aaPredicted RBP14.66□□□□□ -0.06
VEGFA-215ENST00000497139 ADD3Q9UEY8 706 aaKnown RBP14.66□□□□□ -0.06
VEGFA-215ENST00000497139 NWD1Q149M9 1564 aa14.66□□□□□ -0.06
VEGFA-215ENST00000497139 WDR19Q8NEZ3 1342 aa14.66□□□□□ -0.06
VEGFA-215ENST00000497139 MYO1FO00160 1098 aa14.65□□□□□ -0.06
VEGFA-215ENST00000497139 RASSF9O75901 435 aa14.65□□□□□ -0.06
VEGFA-215ENST00000497139 EIF2S2P20042 333 aaKnown RBP14.65□□□□□ -0.06
VEGFA-215ENST00000497139 ACTN3Q08043 901 aaPredicted RBP14.65□□□□□ -0.06
VEGFA-215ENST00000497139 SPATA1Q5VX52 437 aa14.65□□□□□ -0.06
VEGFA-215ENST00000497139 MAP3K14Q99558 947 aa14.65□□□□□ -0.06
VEGFA-215ENST00000497139 HAUS4Q9H6D7 363 aa14.65□□□□□ -0.06
VEGFA-215ENST00000497139 MAP3K2Q9Y2U5 619 aa14.65□□□□□ -0.06
VEGFA-215ENST00000497139 SAR1BQ9Y6B6 198 aa14.65□□□□□ -0.06
VEGFA-215ENST00000497139 TEFQ10587 303 aa14.65□□□□□ -0.06
VEGFA-215ENST00000497139 OTUD7BQ6GQQ9 843 aa14.65□□□□□ -0.06
VEGFA-215ENST00000497139 SUCLG2Q96I99 432 aa14.65□□□□□ -0.06
VEGFA-215ENST00000497139 ACTR5Q9H9F9 607 aaPredicted RBP14.65□□□□□ -0.06
VEGFA-215ENST00000497139 ACEP12821 1306 aa14.65□□□□□ -0.06
VEGFA-215ENST00000497139 C4AP0C0L4 1744 aa14.65□□□□□ -0.06
VEGFA-215ENST00000497139 C4BP0C0L5 1744 aa14.65□□□□□ -0.06
VEGFA-215ENST00000497139 A0A0U1RQJ8 604 aa14.65□□□□□ -0.07
VEGFA-215ENST00000497139 APBA1Q02410 837 aa14.65□□□□□ -0.07
VEGFA-215ENST00000497139 ITIH3Q06033 890 aa14.65□□□□□ -0.07
VEGFA-215ENST00000497139 SKIDA1Q1XH10 827 aa14.65□□□□□ -0.07
VEGFA-215ENST00000497139 TTC39AQ5SRH9 613 aa14.65□□□□□ -0.07
VEGFA-215ENST00000497139 ATRIPQ8WXE1 791 aa14.65□□□□□ -0.07
VEGFA-215ENST00000497139 FAM212AQ96EL1 285 aa14.65□□□□□ -0.07
VEGFA-215ENST00000497139 IQSEC3Q9UPP2 1182 aaPredicted RBP14.65□□□□□ -0.07
VEGFA-215ENST00000497139 CPLX1O14810 134 aa14.64□□□□□ -0.07
VEGFA-215ENST00000497139 CDR1P51861 262 aa14.64□□□□□ -0.07
VEGFA-215ENST00000497139 ZKSCAN8Q15776 578 aaPredicted RBP14.64□□□□□ -0.07
VEGFA-215ENST00000497139 CCDC40Q4G0X9 1142 aa14.64□□□□□ -0.07
VEGFA-215ENST00000497139 CEP85LQ5SZL2 805 aa14.64□□□□□ -0.07
VEGFA-215ENST00000497139 ACRBPQ8NEB7 543 aa14.64□□□□□ -0.07
VEGFA-215ENST00000497139 SPATA20Q8TB22 786 aa14.64□□□□□ -0.07
VEGFA-215ENST00000497139 KAZALD1Q96I82 304 aa14.64□□□□□ -0.07
VEGFA-215ENST00000497139 TRIM6Q9C030 488 aaPredicted RBP14.64□□□□□ -0.07
VEGFA-215ENST00000497139 SAMSN1Q9NSI8 373 aaKnown RBP14.64□□□□□ -0.07
VEGFA-215ENST00000497139 ANO9A1A5B4 782 aa14.64□□□□□ -0.07
VEGFA-215ENST00000497139 MAP2K1Q02750 393 aaPredicted RBP14.64□□□□□ -0.07
VEGFA-215ENST00000497139 CDKAL1Q5VV42 579 aa14.64□□□□□ -0.07
VEGFA-215ENST00000497139 TAX1BP1Q86VP1 789 aa14.64□□□□□ -0.07
VEGFA-215ENST00000497139 KRI1Q8N9T8 703 aaKnown RBP14.64□□□□□ -0.07
VEGFA-215ENST00000497139 GOLGA6L7A0A1B0GV03 622 aa14.63□□□□□ -0.07
VEGFA-215ENST00000497139 GOLIM4O00461 696 aa14.63□□□□□ -0.07
VEGFA-215ENST00000497139 GYPCP04921 128 aa14.63□□□□□ -0.07
VEGFA-215ENST00000497139 CASP14P31944 242 aa14.63□□□□□ -0.07
VEGFA-215ENST00000497139 NAP1L1P55209 391 aaKnown RBP14.63□□□□□ -0.07
VEGFA-215ENST00000497139 TNNI3KQ59H18 835 aa14.63□□□□□ -0.07
VEGFA-215ENST00000497139 EDC3Q96F86 508 aaKnown RBP14.63□□□□□ -0.07
VEGFA-215ENST00000497139 NBPF3Q9H094 633 aa14.63□□□□□ -0.07
VEGFA-215ENST00000497139 EPN3Q9H201 632 aa14.63□□□□□ -0.07
VEGFA-215ENST00000497139 CD248Q9HCU0 757 aa14.63□□□□□ -0.07
VEGFA-215ENST00000497139 COPRSQ9NQ92 184 aa14.63□□□□□ -0.07
VEGFA-215ENST00000497139 ABHD10Q9NUJ1 306 aa14.63□□□□□ -0.07
VEGFA-215ENST00000497139 DBNLQ9UJU6 430 aaKnown RBP14.63□□□□□ -0.07
VEGFA-215ENST00000497139 FPGT-TNNI3KV9GXZ4 949 aa14.63□□□□□ -0.07
VEGFA-215ENST00000497139 SPEF2Q9C093 1822 aa14.63□□□□□ -0.07
VEGFA-215ENST00000497139 TEX33O43247 280 aa14.63□□□□□ -0.07
VEGFA-215ENST00000497139 CDKL5O76039 1030 aa14.63□□□□□ -0.07
VEGFA-215ENST00000497139 TFRCP02786 760 aaKnown RBP14.63□□□□□ -0.07
VEGFA-215ENST00000497139 EZRP15311 586 aaKnown RBP14.63□□□□□ -0.07
VEGFA-215ENST00000497139 GRIPAP1Q4V328 841 aa14.63□□□□□ -0.07
VEGFA-215ENST00000497139 VPS37DQ86XT2 251 aa14.63□□□□□ -0.07
VEGFA-215ENST00000497139 C3orf20Q8ND61 904 aa14.63□□□□□ -0.07
VEGFA-215ENST00000497139 MMS19Q96T76 1030 aa14.63□□□□□ -0.07
VEGFA-215ENST00000497139 SLC8A1P32418 973 aa14.62□□□□□ -0.07
VEGFA-215ENST00000497139 SLC8A3P57103 927 aa14.62□□□□□ -0.07
VEGFA-215ENST00000497139 IFFO1Q0D2I5 559 aa14.62□□□□□ -0.07
VEGFA-215ENST00000497139 NNTQ13423 1086 aa14.62□□□□□ -0.07
VEGFA-215ENST00000497139 HSP90AA4PQ58FG1 418 aa14.62□□□□□ -0.07
VEGFA-215ENST00000497139 EMBQ6PCB8 327 aa14.62□□□□□ -0.07
VEGFA-215ENST00000497139 C1orf131Q8NDD1 294 aaKnown RBP14.62□□□□□ -0.07
VEGFA-215ENST00000497139 RUFY1Q96T51 708 aa14.62□□□□□ -0.07
VEGFA-215ENST00000497139 ATP6V0A4Q9HBG4 840 aa14.62□□□□□ -0.07
VEGFA-215ENST00000497139 GOLGA8BA8MQT2 603 aa14.62□□□□□ -0.07
VEGFA-215ENST00000497139 ERVK-24P63145 666 aa14.62□□□□□ -0.07
VEGFA-215ENST00000497139 SNCBQ16143 134 aa14.62□□□□□ -0.07
VEGFA-215ENST00000497139 ZMYM1Q5SVZ6 1142 aa14.62□□□□□ -0.07
VEGFA-215ENST00000497139 SLC9C2Q5TAH2 1124 aa14.62□□□□□ -0.07
VEGFA-215ENST00000497139 KDM7AQ6ZMT4 941 aa14.62□□□□□ -0.07
VEGFA-215ENST00000497139 ZNF572Q7Z3I7 529 aaPredicted RBP14.62□□□□□ -0.07
VEGFA-215ENST00000497139 MMGT1Q8N4V1 131 aa14.62□□□□□ -0.07
VEGFA-215ENST00000497139 HPS5Q9UPZ3 1129 aa14.62□□□□□ -0.07
VEGFA-215ENST00000497139 SAMM50Q9Y512 469 aa14.62□□□□□ -0.07
VEGFA-215ENST00000497139 TNFRSF8P28908 595 aa14.61□□□□□ -0.07
VEGFA-215ENST00000497139 LTKP29376 864 aa14.61□□□□□ -0.07
VEGFA-215ENST00000497139 EPHB4P54760 987 aa14.61□□□□□ -0.07
VEGFA-215ENST00000497139 TRMT44Q8IYL2 757 aaKnown RBP14.61□□□□□ -0.07
VEGFA-215ENST00000497139 ZNF579Q8NAF0 562 aaKnown RBP14.61□□□□□ -0.07
VEGFA-215ENST00000497139 MED15Q96RN5 788 aa14.61□□□□□ -0.07
VEGFA-215ENST00000497139 SYNRGQ9UMZ2 1314 aa14.61□□□□□ -0.07
VEGFA-215ENST00000497139 DDX58O95786 925 aaKnown RBP14.61□□□□□ -0.07
VEGFA-215ENST00000497139 HSPD1P10809 573 aaKnown RBP14.61□□□□□ -0.07
VEGFA-215ENST00000497139 KLF18A0A0U1RQI7 1052 aa14.6□□□□□ -0.07
VEGFA-215ENST00000497139 KLHL33A6NCF5 533 aa14.6□□□□□ -0.07
VEGFA-215ENST00000497139 HSF2BPO75031 334 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms