RNA–Protein interactions for RNA: ENST00000496627.5

GCOM1-212, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 2,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-212ENST00000496627 SRPRBQ9Y5M8 271 aaKnown RBP16.87■□□□□ 0.29
GCOM1-212ENST00000496627 TAF1P21675 1872 aa16.87■□□□□ 0.29
GCOM1-212ENST00000496627 CASZ1Q86V15 1759 aa16.87■□□□□ 0.29
GCOM1-212ENST00000496627 DUOX1Q9NRD9 1551 aa16.87■□□□□ 0.29
GCOM1-212ENST00000496627 TMEM232C9JQI7 657 aa16.87■□□□□ 0.29
GCOM1-212ENST00000496627 TUBB4AP04350 444 aa16.87■□□□□ 0.29
GCOM1-212ENST00000496627 PRR29P0C7W0 189 aa16.87■□□□□ 0.29
GCOM1-212ENST00000496627 BMP6P22004 513 aa16.87■□□□□ 0.29
GCOM1-212ENST00000496627 GYG1P46976 350 aa16.87■□□□□ 0.29
GCOM1-212ENST00000496627 PPP2R5BQ15173 497 aa16.87■□□□□ 0.29
GCOM1-212ENST00000496627 SEC23AQ15436 765 aa16.87■□□□□ 0.29
GCOM1-212ENST00000496627 CABP5Q9NP86 173 aa16.87■□□□□ 0.29
GCOM1-212ENST00000496627 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.87■□□□□ 0.29
GCOM1-212ENST00000496627 V9GYY5 206 aaPredicted RBP16.87■□□□□ 0.29
GCOM1-212ENST00000496627 CACNA1SQ13698 1873 aa16.86■□□□□ 0.29
GCOM1-212ENST00000496627 COL4A1P02462 1669 aa16.86■□□□□ 0.29
GCOM1-212ENST00000496627 ZNF804BA4D1E1 1349 aa16.86■□□□□ 0.29
GCOM1-212ENST00000496627 ANKRD18AQ8IVF6 992 aa16.86■□□□□ 0.29
GCOM1-212ENST00000496627 PDILTQ8N807 584 aa16.86■□□□□ 0.29
GCOM1-212ENST00000496627 ROBO1Q9Y6N7 1651 aa16.86■□□□□ 0.29
GCOM1-212ENST00000496627 KANK3Q6NY19 840 aa16.86■□□□□ 0.29
GCOM1-212ENST00000496627 MLKLQ8NB16 471 aa16.86■□□□□ 0.29
GCOM1-212ENST00000496627 ZNF397Q8NF99 534 aaPredicted RBP16.86■□□□□ 0.29
GCOM1-212ENST00000496627 HSP90AA4PQ58FG1 418 aa16.85■□□□□ 0.29
GCOM1-212ENST00000496627 CATIPQ7Z7H3 387 aa16.85■□□□□ 0.29
GCOM1-212ENST00000496627 ZSCAN10Q96SZ4 725 aaPredicted RBP16.85■□□□□ 0.29
GCOM1-212ENST00000496627 MYH13Q9UKX3 1938 aa16.85■□□□□ 0.29
GCOM1-212ENST00000496627 CDK11BP21127 795 aaKnown RBP16.85■□□□□ 0.29
GCOM1-212ENST00000496627 CAVIN4Q5BKX8 364 aa16.85■□□□□ 0.29
GCOM1-212ENST00000496627 IFIT1BQ5T764 474 aaKnown RBP16.85■□□□□ 0.29
GCOM1-212ENST00000496627 NT5DC1Q5TFE4 455 aa16.85■□□□□ 0.29
GCOM1-212ENST00000496627 GRAMD1CQ8IYS0 662 aa16.85■□□□□ 0.29
GCOM1-212ENST00000496627 TRIML1Q8N9V2 468 aa16.85■□□□□ 0.29
GCOM1-212ENST00000496627 CCDC34Q96HJ3 373 aa16.85■□□□□ 0.29
GCOM1-212ENST00000496627 CSRNP2Q9H175 543 aa16.85■□□□□ 0.29
GCOM1-212ENST00000496627 OGFRQ9NZT2 677 aa16.85■□□□□ 0.29
GCOM1-212ENST00000496627 VPS54Q9P1Q0 977 aa16.85■□□□□ 0.29
GCOM1-212ENST00000496627 NFE2L3Q9Y4A8 694 aa16.85■□□□□ 0.29
GCOM1-212ENST00000496627 DLEC1Q9Y238 1755 aa16.84■□□□□ 0.29
GCOM1-212ENST00000496627 COL1A1P02452 1464 aaPredicted RBP16.84■□□□□ 0.29
GCOM1-212ENST00000496627 TRIM75PA6NK02 468 aa16.84■□□□□ 0.29
GCOM1-212ENST00000496627 KRT2P35908 639 aa16.84■□□□□ 0.29
GCOM1-212ENST00000496627 UBE4AQ14139 1066 aa16.84■□□□□ 0.29
GCOM1-212ENST00000496627 MORC3Q14149 939 aa16.84■□□□□ 0.29
GCOM1-212ENST00000496627 ELF2Q15723 593 aa16.84■□□□□ 0.29
GCOM1-212ENST00000496627 ZNF827Q17R98 1081 aa16.84■□□□□ 0.29
GCOM1-212ENST00000496627 ENAHQ8N8S7 591 aaPredicted RBP16.84■□□□□ 0.29
GCOM1-212ENST00000496627 RIOK1Q9BRS2 568 aaKnown RBP16.84■□□□□ 0.29
GCOM1-212ENST00000496627 SCN7AQ01118 1682 aa16.84■□□□□ 0.29
GCOM1-212ENST00000496627 ACTN4O43707 911 aaKnown RBP16.84■□□□□ 0.29
GCOM1-212ENST00000496627 DYNLL1P63167 89 aaKnown RBP16.84■□□□□ 0.29
GCOM1-212ENST00000496627 GOLGA8FQ08AF8 430 aa16.84■□□□□ 0.29
GCOM1-212ENST00000496627 GOLGA8DPQ0D2H9 430 aa16.84■□□□□ 0.29
GCOM1-212ENST00000496627 PTPN21Q16825 1174 aa16.84■□□□□ 0.29
GCOM1-212ENST00000496627 L2HGDHQ9H9P8 463 aa16.84■□□□□ 0.29
GCOM1-212ENST00000496627 SPATA31A1Q5TZJ5 1347 aa16.83■□□□□ 0.28
GCOM1-212ENST00000496627 SMIM22K7EJ46 135 aa16.83■□□□□ 0.28
GCOM1-212ENST00000496627 SARSP49591 514 aaKnown RBP16.83■□□□□ 0.28
GCOM1-212ENST00000496627 FMR1Q06787 632 aaKnown RBP eCLIP16.83■□□□□ 0.28
GCOM1-212ENST00000496627 IQCA1Q86XH1 822 aa16.83■□□□□ 0.28
GCOM1-212ENST00000496627 ENOX1Q8TC92 643 aaKnown RBP16.83■□□□□ 0.28
GCOM1-212ENST00000496627 TMX1Q9H3N1 280 aa16.83■□□□□ 0.28
GCOM1-212ENST00000496627 INTS13Q9NVM9 706 aa16.83■□□□□ 0.28
GCOM1-212ENST00000496627 RBM28Q9NW13 759 aaKnown RBP16.83■□□□□ 0.28
GCOM1-212ENST00000496627 THRAP3Q9Y2W1 955 aaKnown RBP16.83■□□□□ 0.28
GCOM1-212ENST00000496627 CYP2D7A0A087X1C5 515 aa16.83■□□□□ 0.28
GCOM1-212ENST00000496627 ERFEQ4G0M1 354 aa16.83■□□□□ 0.28
GCOM1-212ENST00000496627 NRAPQ86VF7 1730 aa16.83■□□□□ 0.28
GCOM1-212ENST00000496627 TRMT44Q8IYL2 757 aaKnown RBP16.83■□□□□ 0.28
GCOM1-212ENST00000496627 MARCH10Q8NA82 808 aaPredicted RBP16.83■□□□□ 0.28
GCOM1-212ENST00000496627 BRIP1Q9BX63 1249 aa16.83■□□□□ 0.28
GCOM1-212ENST00000496627 BRMS1Q9HCU9 246 aa16.83■□□□□ 0.28
GCOM1-212ENST00000496627 FAM205CA6NFA0 338 aa16.82■□□□□ 0.28
GCOM1-212ENST00000496627 PRPF3O43395 683 aaKnown RBP16.82■□□□□ 0.28
GCOM1-212ENST00000496627 PRDM1O75626 825 aa16.82■□□□□ 0.28
GCOM1-212ENST00000496627 ETF1P62495 437 aaKnown RBP16.82■□□□□ 0.28
GCOM1-212ENST00000496627 USP49Q70CQ1 688 aa16.82■□□□□ 0.28
GCOM1-212ENST00000496627 FCHSD1Q86WN1 690 aa16.82■□□□□ 0.28
GCOM1-212ENST00000496627 PHF20Q9BVI0 1012 aa16.82■□□□□ 0.28
GCOM1-212ENST00000496627 AATFQ9NY61 560 aaKnown RBP eCLIP16.82■□□□□ 0.28
GCOM1-212ENST00000496627 COL5A3P25940 1745 aaPredicted RBP16.82■□□□□ 0.28
GCOM1-212ENST00000496627 PHLPP2Q6ZVD8 1323 aa16.82■□□□□ 0.28
GCOM1-212ENST00000496627 hCG_1642624A0A1W2PR95 340 aa16.81■□□□□ 0.28
GCOM1-212ENST00000496627 ZSCAN12O43309 604 aa16.81■□□□□ 0.28
GCOM1-212ENST00000496627 ADAMTS2O95450 1211 aa16.81■□□□□ 0.28
GCOM1-212ENST00000496627 CALM1P0DP23 149 aa16.81■□□□□ 0.28
GCOM1-212ENST00000496627 CALM2P0DP24 149 aa16.81■□□□□ 0.28
GCOM1-212ENST00000496627 CALM3P0DP25 149 aa16.81■□□□□ 0.28
GCOM1-212ENST00000496627 PKN1Q16512 942 aa16.81■□□□□ 0.28
GCOM1-212ENST00000496627 NUTM2AQ8IVF1 878 aaPredicted RBP16.81■□□□□ 0.28
GCOM1-212ENST00000496627 DHX58Q96C10 678 aa16.81■□□□□ 0.28
GCOM1-212ENST00000496627 BSDC1Q9NW68 430 aaPredicted RBP16.81■□□□□ 0.28
GCOM1-212ENST00000496627 DNAI1Q9UI46 699 aa16.81■□□□□ 0.28
GCOM1-212ENST00000496627 AHDC1Q5TGY3 1603 aaPredicted RBP16.81■□□□□ 0.28
GCOM1-212ENST00000496627 ARHGAP6O43182 974 aa16.81■□□□□ 0.28
GCOM1-212ENST00000496627 PLEKHA8P1O95397 391 aa16.81■□□□□ 0.28
GCOM1-212ENST00000496627 ZNF18P17022 549 aa16.81■□□□□ 0.28
GCOM1-212ENST00000496627 ZSCAN20P17040 1043 aaPredicted RBP16.81■□□□□ 0.28
GCOM1-212ENST00000496627 PLCD1P51178 756 aa16.81■□□□□ 0.28
GCOM1-212ENST00000496627 SHISA4Q96DD7 197 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms