RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 CAP2P40123 477 aa25.73■■□□□ 1.71
C9orf3-222ENST00000496567 MAP3K9P80192 1104 aa25.73■■□□□ 1.71
C9orf3-222ENST00000496567 RRP12Q5JTH9 1297 aaKnown RBP25.73■■□□□ 1.71
C9orf3-222ENST00000496567 RALYLQ86SE5 291 aaKnown RBP25.73■■□□□ 1.71
C9orf3-222ENST00000496567 NCOA7Q8NI08 942 aa25.73■■□□□ 1.71
C9orf3-222ENST00000496567 ESR2Q92731 530 aa25.73■■□□□ 1.71
C9orf3-222ENST00000496567 C22orf23Q9BZE7 217 aa25.73■■□□□ 1.71
C9orf3-222ENST00000496567 GINM1Q9NU53 330 aa25.73■■□□□ 1.71
C9orf3-222ENST00000496567 SNX14Q9Y5W7 946 aa25.73■■□□□ 1.71
C9orf3-222ENST00000496567 TAF6LQ9Y6J9 622 aa25.73■■□□□ 1.71
C9orf3-222ENST00000496567 NEDD4P46934 1319 aa25.73■■□□□ 1.71
C9orf3-222ENST00000496567 RANBP6O60518 1105 aaKnown RBP25.73■■□□□ 1.71
C9orf3-222ENST00000496567 ANAPC15P60006 121 aa25.73■■□□□ 1.71
C9orf3-222ENST00000496567 ANKRD13AQ8IZ07 590 aa25.73■■□□□ 1.71
C9orf3-222ENST00000496567 CABP5Q9NP86 173 aa25.73■■□□□ 1.71
C9orf3-222ENST00000496567 INPP5BP32019 993 aa25.72■■□□□ 1.71
C9orf3-222ENST00000496567 ABCB5Q2M3G0 1257 aa25.72■■□□□ 1.71
C9orf3-222ENST00000496567 STOX1Q6ZVD7 989 aa25.72■■□□□ 1.71
C9orf3-222ENST00000496567 CSADQ9Y600 493 aa25.72■■□□□ 1.71
C9orf3-222ENST00000496567 TSPY2A6NKD2 308 aa25.71■■□□□ 1.71
C9orf3-222ENST00000496567 GDF11O95390 407 aa25.71■■□□□ 1.71
C9orf3-222ENST00000496567 TSPY3P0CV98 308 aa25.71■■□□□ 1.71
C9orf3-222ENST00000496567 TSPY8P0CW00 308 aa25.71■■□□□ 1.71
C9orf3-222ENST00000496567 MOB2Q70IA6 237 aa25.71■■□□□ 1.71
C9orf3-222ENST00000496567 B4E1Z4 1266 aa25.7■■□□□ 1.71
C9orf3-222ENST00000496567 MPHOSPH10O00566 681 aaKnown RBP25.7■■□□□ 1.71
C9orf3-222ENST00000496567 ASNSP08243 561 aa25.7■■□□□ 1.71
C9orf3-222ENST00000496567 TFAP4Q01664 338 aa25.7■■□□□ 1.71
C9orf3-222ENST00000496567 RRP1BQ14684 758 aaKnown RBP25.7■■□□□ 1.71
C9orf3-222ENST00000496567 NOL9Q5SY16 702 aaKnown RBP25.7■■□□□ 1.71
C9orf3-222ENST00000496567 SCYL3Q8IZE3 742 aa25.7■■□□□ 1.71
C9orf3-222ENST00000496567 TMEM88BA6NKF7 163 aa25.69■■□□□ 1.7
C9orf3-222ENST00000496567 UBE2Q2LH0YL09 131 aa25.69■■□□□ 1.7
C9orf3-222ENST00000496567 AKR1B1P15121 316 aa25.69■■□□□ 1.7
C9orf3-222ENST00000496567 PSMA5P28066 241 aa25.69■■□□□ 1.7
C9orf3-222ENST00000496567 LDLRAD1Q5T700 205 aa25.69■■□□□ 1.7
C9orf3-222ENST00000496567 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.69■■□□□ 1.7
C9orf3-222ENST00000496567 TMEM179Q6ZVK1 233 aa25.69■■□□□ 1.7
C9orf3-222ENST00000496567 ZKSCAN4Q969J2 545 aaPredicted RBP25.69■■□□□ 1.7
C9orf3-222ENST00000496567 NEK1Q96PY6 1258 aa25.69■■□□□ 1.7
C9orf3-222ENST00000496567 PICK1Q9NRD5 415 aa25.69■■□□□ 1.7
C9orf3-222ENST00000496567 KDM4AO75164 1064 aa25.69■■□□□ 1.7
C9orf3-222ENST00000496567 GH2P01242 217 aa25.69■■□□□ 1.7
C9orf3-222ENST00000496567 HMGB1P09429 215 aaKnown RBP25.69■■□□□ 1.7
C9orf3-222ENST00000496567 RBM25P49756 843 aaKnown RBP25.69■■□□□ 1.7
C9orf3-222ENST00000496567 FAM47AQ5JRC9 791 aa25.69■■□□□ 1.7
C9orf3-222ENST00000496567 NEDD1Q8NHV4 660 aa25.69■■□□□ 1.7
C9orf3-222ENST00000496567 VGLL4Q14135 290 aa25.68■■□□□ 1.7
C9orf3-222ENST00000496567 ADCK5Q3MIX3 580 aa25.68■■□□□ 1.7
C9orf3-222ENST00000496567 ZBTB21Q9ULJ3 1066 aa25.68■■□□□ 1.7
C9orf3-222ENST00000496567 PLIN4Q96Q06 1357 aa25.67■■□□□ 1.7
C9orf3-222ENST00000496567 IL17RAQ96F46 866 aa25.67■■□□□ 1.7
C9orf3-222ENST00000496567 JAKMIP1Q96N16 626 aaKnown RBP25.67■■□□□ 1.7
C9orf3-222ENST00000496567 ZSWIM5Q9P217 1185 aa25.67■■□□□ 1.7
C9orf3-222ENST00000496567 OTOFQ9HC10 1997 aa25.67■■□□□ 1.7
C9orf3-222ENST00000496567 DOCK1Q14185 1865 aa25.66■■□□□ 1.7
C9orf3-222ENST00000496567 HUNKP57058 714 aa25.66■■□□□ 1.7
C9orf3-222ENST00000496567 IQCA1Q86XH1 822 aa25.66■■□□□ 1.7
C9orf3-222ENST00000496567 TBC1D32Q96NH3 1257 aa25.66■■□□□ 1.7
C9orf3-222ENST00000496567 TM6SF1Q9BZW5 370 aa25.66■■□□□ 1.7
C9orf3-222ENST00000496567 MCM5P33992 734 aa25.65■■□□□ 1.7
C9orf3-222ENST00000496567 APLP1P51693 650 aa25.65■■□□□ 1.7
C9orf3-222ENST00000496567 JAG1P78504 1218 aa25.65■■□□□ 1.7
C9orf3-222ENST00000496567 RAB3GAP1Q15042 981 aa25.65■■□□□ 1.7
C9orf3-222ENST00000496567 PPP4R3BQ5MIZ7 849 aa25.65■■□□□ 1.7
C9orf3-222ENST00000496567 SAPCD2Q86UD0 394 aa25.65■■□□□ 1.7
C9orf3-222ENST00000496567 MB21D2Q8IYB1 491 aaPredicted RBP25.65■■□□□ 1.7
C9orf3-222ENST00000496567 TCP11L1Q9NUJ3 509 aa25.65■■□□□ 1.7
C9orf3-222ENST00000496567 SNCAIPQ9Y6H5 919 aa25.65■■□□□ 1.7
C9orf3-222ENST00000496567 ATAD5Q96QE3 1844 aa25.65■■□□□ 1.7
C9orf3-222ENST00000496567 CCDC178Q5BJE1 867 aa25.65■■□□□ 1.7
C9orf3-222ENST00000496567 SLC10A4Q96EP9 437 aa25.65■■□□□ 1.7
C9orf3-222ENST00000496567 KANSL2Q9H9L4 492 aa25.65■■□□□ 1.7
C9orf3-222ENST00000496567 TLL2Q9Y6L7 1015 aa25.65■■□□□ 1.7
C9orf3-222ENST00000496567 USP17L5A8MUK1 530 aa25.64■■□□□ 1.69
C9orf3-222ENST00000496567 PTPRAP18433 802 aa25.64■■□□□ 1.69
C9orf3-222ENST00000496567 SEPT2Q15019 361 aa25.64■■□□□ 1.69
C9orf3-222ENST00000496567 SHROOM1Q2M3G4 852 aaPredicted RBP25.64■■□□□ 1.69
C9orf3-222ENST00000496567 BLOC1S2Q6QNY1 142 aa25.64■■□□□ 1.69
C9orf3-222ENST00000496567 CLMNQ96JQ2 1002 aa25.64■■□□□ 1.69
C9orf3-222ENST00000496567 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.64■■□□□ 1.69
C9orf3-222ENST00000496567 TBC1D2Q9BYX2 928 aa25.64■■□□□ 1.69
C9orf3-222ENST00000496567 ABT1Q9ULW3 272 aaKnown RBP25.64■■□□□ 1.69
C9orf3-222ENST00000496567 CASTP20810 708 aaKnown RBP25.63■■□□□ 1.69
C9orf3-222ENST00000496567 GUCY1A2P33402 732 aa25.63■■□□□ 1.69
C9orf3-222ENST00000496567 SART3Q15020 963 aaKnown RBP25.63■■□□□ 1.69
C9orf3-222ENST00000496567 CYB5R4Q7L1T6 521 aa25.63■■□□□ 1.69
C9orf3-222ENST00000496567 DHX32Q7L7V1 743 aaKnown RBP25.63■■□□□ 1.69
C9orf3-222ENST00000496567 NKX2-3Q8TAU0 364 aa25.63■■□□□ 1.69
C9orf3-222ENST00000496567 UBAC1Q9BSL1 405 aa25.63■■□□□ 1.69
C9orf3-222ENST00000496567 MTA3Q9BTC8 594 aa25.63■■□□□ 1.69
C9orf3-222ENST00000496567 ELP3Q9H9T3 547 aa25.63■■□□□ 1.69
C9orf3-222ENST00000496567 GREB1LQ9C091 1923 aaPredicted RBP25.62■■□□□ 1.69
C9orf3-222ENST00000496567 IGKV6D-41A0A0C4DH26 115 aa25.62■■□□□ 1.69
C9orf3-222ENST00000496567 ERO1BQ86YB8 467 aa25.62■■□□□ 1.69
C9orf3-222ENST00000496567 AS3MTQ9HBK9 375 aa25.62■■□□□ 1.69
C9orf3-222ENST00000496567 ZSWIM6Q9HCJ5 1215 aa25.62■■□□□ 1.69
C9orf3-222ENST00000496567 CREBZFQ9NS37 354 aa25.62■■□□□ 1.69
C9orf3-222ENST00000496567 ICA1Q05084 483 aa25.61■■□□□ 1.69
C9orf3-222ENST00000496567 CEP95Q96GE4 821 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms