RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 PARP1P09874 1014 aaKnown RBP9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 ALDH3A1P30838 453 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 ABTB1Q969K4 478 aaPredicted RBP9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 RAB3IPQ96QF0 476 aaPredicted RBP9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 MOV10L1Q9BXT6 1211 aaKnown RBP9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 AOX1Q06278 1338 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 GMNCA6NCL1 334 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 LIN7AO14910 233 aaPredicted RBP9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 GIGYF1O75420 1035 aaPredicted RBP9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 CCND1P24385 295 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 G3BP1Q13283 466 aaKnown RBP eCLIP9.12□□□□□ -0.953e-6■■■■□ 22.7
CRNKL1-205ENST00000496549 SLC5A9Q2M3M2 681 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 Q4G0T1 1027 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 NCAPH2Q6IBW4 605 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 LCA5Q86VQ0 697 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 LZICQ8WZA0 190 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 PGBD1Q96JS3 809 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 RBM8AQ9Y5S9 174 aaKnown RBP9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 ARHGAP5Q13017 1502 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 N4BP3O15049 544 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 ATP2A2P16615 1042 aaKnown RBP9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 GJA8P48165 433 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 TMED1Q13445 227 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 ADALQ6DHV7 355 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 ARL10Q8N8L6 244 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 MAIP1Q8WWC4 291 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 AIDAQ96BJ3 306 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 C8orf76Q96K31 380 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 MAGEC2Q9UBF1 373 aaPredicted RBP9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 RPS6KL1Q9Y6S9 549 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 MAP3K5Q99683 1374 aa9.12□□□□□ -0.95
CRNKL1-205ENST00000496549 SHOX2O60902 331 aaPredicted RBP9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 SASH1O94885 1247 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 VIMP08670 466 aaKnown RBP9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 HMOX1P09601 288 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 KIF5AQ12840 1032 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 STAMBPL1Q96FJ0 436 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 TCEANC2Q96MN5 208 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 MPHOSPH6Q99547 160 aaKnown RBP9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 WWC3Q9ULE0 1092 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 C9orf84Q5VXU9 1444 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 E2F6O75461 281 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 TMCC1O94876 653 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 ATP6V1G2O95670 118 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 SAFBQ15424 915 aaKnown RBP eCLIP9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 CCDC174Q6PII3 467 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 JAKMIP2Q96AA8 810 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 LRRC45Q96CN5 670 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 KLHL29Q96CT2 875 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 OPTNQ96CV9 577 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 CCDC113Q9H0I3 377 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 UNC45AQ9H3U1 944 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 HAUS4Q9H6D7 363 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 NFE2L3Q9Y4A8 694 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 USH1CQ9Y6N9 552 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 TTC37Q6PGP7 1564 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 B4DLN1 442 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 OATP04181 439 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 KLC1Q07866 573 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 CUL4BQ13620 913 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 NAA16Q6N069 864 aaPredicted RBP9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 OR8K1Q8NGG5 319 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 CCDC43Q96MW1 224 aaKnown RBP9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 ANKRD27Q96NW4 1050 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 FTOQ9C0B1 505 aaKnown RBP eCLIP9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 GGNBP2Q9H3C7 697 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 GGA2Q9UJY4 613 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 TBC1D2BQ9UPU7 963 aa9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.11□□□□□ -0.95
CRNKL1-205ENST00000496549 ATP6V1G1O75348 118 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 PDHA1P08559 390 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 ATP1A3P13637 1013 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 GUCY1A3Q02108 690 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 TRIM14Q14142 442 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 MIS18BP1Q6P0N0 1132 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 CRELD2Q6UXH1 353 aaPredicted RBP9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 TAF4BQ92750 862 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 HAUS1Q96CS2 278 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 PANX2Q96RD6 677 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 SELENOSQ9BQE4 189 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 CTTNBP2NLQ9P2B4 639 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 RCOR1Q9UKL0 485 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 DAAM1Q9Y4D1 1078 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 PSMC4P43686 418 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 ZBTB17Q13105 803 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 MYCBPAPQ8TBZ2 947 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 CDC5LQ99459 802 aaKnown RBP9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 ZSWIM6Q9HCJ5 1215 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 CCDC160A6NGH7 325 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 SYF2O95926 243 aaKnown RBP9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 MDH1P40925 334 aaKnown RBP9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 SPAG1Q07617 926 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 USP4Q13107 963 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 PTGISQ16647 500 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 CREB3L3Q68CJ9 461 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 CYFIP2Q96F07 1278 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 TRIM35Q9UPQ4 493 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 NOS1P29475 1434 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms