RNA–Protein interactions for RNA: ENST00000496108.5

LYSMD4-209, Transcript of LysM domain containing 4, humanhuman

TSL 2

Gene LYSMD4, Length 2,222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-209ENST00000496108 MAPK8IP2Q13387 824 aaPredicted RBP23.32■■□□□ 1.32
LYSMD4-209ENST00000496108 SCARF1Q14162 830 aa23.32■■□□□ 1.32
LYSMD4-209ENST00000496108 IGDCC4Q8TDY8 1250 aa23.32■■□□□ 1.32
LYSMD4-209ENST00000496108 TOM1O60784 492 aa23.32■■□□□ 1.32
LYSMD4-209ENST00000496108 VSNL1P62760 191 aa23.32■■□□□ 1.32
LYSMD4-209ENST00000496108 HSP90AB3PQ58FF7 597 aa23.32■■□□□ 1.32
LYSMD4-209ENST00000496108 CDKAL1Q5VV42 579 aa23.32■■□□□ 1.32
LYSMD4-209ENST00000496108 WDR93Q6P2C0 686 aa23.32■■□□□ 1.32
LYSMD4-209ENST00000496108 FOXP1Q9H334 677 aaPredicted RBP23.32■■□□□ 1.32
LYSMD4-209ENST00000496108 LY9Q9HBG7 655 aa23.32■■□□□ 1.32
LYSMD4-209ENST00000496108 SRPRBQ9Y5M8 271 aaKnown RBP23.32■■□□□ 1.32
LYSMD4-209ENST00000496108 MEGF6O75095 1541 aa23.31■■□□□ 1.32
LYSMD4-209ENST00000496108 N4BP1O75113 896 aaKnown RBP23.31■■□□□ 1.32
LYSMD4-209ENST00000496108 MAGEA9P43362 315 aa23.31■■□□□ 1.32
LYSMD4-209ENST00000496108 GRIN1Q05586 938 aa23.31■■□□□ 1.32
LYSMD4-209ENST00000496108 SLC35F6Q8N357 371 aa23.31■■□□□ 1.32
LYSMD4-209ENST00000496108 DENND2AQ9ULE3 1009 aa23.31■■□□□ 1.32
LYSMD4-209ENST00000496108 NBPF26B4DH59 902 aa23.31■■□□□ 1.32
LYSMD4-209ENST00000496108 IFNAR1P17181 557 aa23.31■■□□□ 1.32
LYSMD4-209ENST00000496108 LIFRP42702 1097 aa23.31■■□□□ 1.32
LYSMD4-209ENST00000496108 NBPF14Q5TI25 921 aa23.31■■□□□ 1.32
LYSMD4-209ENST00000496108 NBPF10Q6P3W6 841 aaKnown RBP23.31■■□□□ 1.32
LYSMD4-209ENST00000496108 NBPF15Q8N660 670 aa23.31■■□□□ 1.32
LYSMD4-209ENST00000496108 VIPAS39Q9H9C1 493 aa23.31■■□□□ 1.32
LYSMD4-209ENST00000496108 WWC3Q9ULE0 1092 aa23.31■■□□□ 1.32
LYSMD4-209ENST00000496108 CEP131Q9UPN4 1083 aa23.31■■□□□ 1.32
LYSMD4-209ENST00000496108 TBC1D2BQ9UPU7 963 aa23.31■■□□□ 1.32
LYSMD4-209ENST00000496108 ADD2P35612 726 aa23.3■■□□□ 1.32
LYSMD4-209ENST00000496108 FILIP1LQ4L180 1135 aa23.3■■□□□ 1.32
LYSMD4-209ENST00000496108 NFXL1Q6ZNB6 911 aa23.3■■□□□ 1.32
LYSMD4-209ENST00000496108 SLC26A6Q9BXS9 759 aa23.3■■□□□ 1.32
LYSMD4-209ENST00000496108 SENP2Q9HC62 589 aa23.3■■□□□ 1.32
LYSMD4-209ENST00000496108 SYNRGQ9UMZ2 1314 aa23.3■■□□□ 1.32
LYSMD4-209ENST00000496108 MYH7P12883 1935 aa23.3■■□□□ 1.32
LYSMD4-209ENST00000496108 A0A0U1RQJ8 604 aa23.29■■□□□ 1.32
LYSMD4-209ENST00000496108 BTBD18B2RXH4 712 aa23.29■■□□□ 1.32
LYSMD4-209ENST00000496108 TMTC1Q8IUR5 882 aa23.29■■□□□ 1.32
LYSMD4-209ENST00000496108 DIS3L2Q8IYB7 885 aaKnown RBP23.29■■□□□ 1.32
LYSMD4-209ENST00000496108 NKX2-3Q8TAU0 364 aa23.29■■□□□ 1.32
LYSMD4-209ENST00000496108 ATRIPQ8WXE1 791 aa23.29■■□□□ 1.32
LYSMD4-209ENST00000496108 PARP4Q9UKK3 1724 aaKnown RBP23.29■■□□□ 1.32
LYSMD4-209ENST00000496108 RGPD5Q99666 1765 aa23.29■■□□□ 1.32
LYSMD4-209ENST00000496108 CUL4BQ13620 913 aa23.29■■□□□ 1.32
LYSMD4-209ENST00000496108 CCDC57Q2TAC2 916 aa23.29■■□□□ 1.32
LYSMD4-209ENST00000496108 GRAMD1CQ8IYS0 662 aa23.29■■□□□ 1.32
LYSMD4-209ENST00000496108 SUGCTQ9HAC7 445 aa23.29■■□□□ 1.32
LYSMD4-209ENST00000496108 TRPM3Q9HCF6 1732 aaPredicted RBP23.29■■□□□ 1.32
LYSMD4-209ENST00000496108 B4E1Z4 1266 aa23.28■■□□□ 1.32
LYSMD4-209ENST00000496108 RHOXF2BP0C7M4 288 aa23.28■■□□□ 1.32
LYSMD4-209ENST00000496108 MST1RQ04912 1400 aa23.28■■□□□ 1.32
LYSMD4-209ENST00000496108 TTLL7Q6ZT98 887 aa23.28■■□□□ 1.32
LYSMD4-209ENST00000496108 RHOXF2Q9BQY4 288 aa23.28■■□□□ 1.32
LYSMD4-209ENST00000496108 AARSP49588 968 aaKnown RBP eCLIP23.28■■□□□ 1.32
LYSMD4-209ENST00000496108 TMEM67Q5HYA8 995 aa23.28■■□□□ 1.32
LYSMD4-209ENST00000496108 CCDC102AQ96A19 550 aa23.28■■□□□ 1.32
LYSMD4-209ENST00000496108 NLRP2Q9NX02 1062 aa23.28■■□□□ 1.32
LYSMD4-209ENST00000496108 LRP6O75581 1613 aa23.27■■□□□ 1.32
LYSMD4-209ENST00000496108 GYPCP04921 128 aa23.27■■□□□ 1.32
LYSMD4-209ENST00000496108 CASP14P31944 242 aa23.27■■□□□ 1.32
LYSMD4-209ENST00000496108 AMPD2Q01433 879 aa23.27■■□□□ 1.32
LYSMD4-209ENST00000496108 CTCFLQ8NI51 663 aaPredicted RBP23.27■■□□□ 1.32
LYSMD4-209ENST00000496108 SEC31BQ9NQW1 1179 aa23.27■■□□□ 1.32
LYSMD4-209ENST00000496108 UBE3CQ15386 1083 aa23.27■■□□□ 1.31
LYSMD4-209ENST00000496108 CPLX3Q8WVH0 158 aa23.27■■□□□ 1.31
LYSMD4-209ENST00000496108 SLC12A7Q9Y666 1083 aa23.27■■□□□ 1.31
LYSMD4-209ENST00000496108 CABP4P57796 275 aa23.26■■□□□ 1.31
LYSMD4-209ENST00000496108 LRRC31Q6UY01 552 aa23.26■■□□□ 1.31
LYSMD4-209ENST00000496108 ZNF512BQ96KM6 892 aaPredicted RBP23.26■■□□□ 1.31
LYSMD4-209ENST00000496108 CDC5LQ99459 802 aaKnown RBP23.26■■□□□ 1.31
LYSMD4-209ENST00000496108 CYP27B1O15528 508 aa23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 ARHGAP25P42331 645 aa23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 TTF1Q15361 905 aaPredicted RBP23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 WWC2Q6AWC2 1192 aa23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 LMOD2Q6P5Q4 547 aa23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 SH3RF1Q7Z6J0 888 aa23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 BCL9LQ86UU0 1499 aa23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 PKD1L3Q7Z443 1732 aa23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 EIF3CLB5ME19 914 aaKnown RBP23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 UBE2Q2LH0YL09 131 aa23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 MCM3P25205 808 aa23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 FXR1P51114 621 aaKnown RBP eCLIP23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 CORO7P57737 925 aa23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 TRIM14Q14142 442 aa23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 ALX1Q15699 326 aa23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 PI16Q6UXB8 463 aa23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 TRIM22Q8IYM9 498 aa23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 PLCD3Q8N3E9 789 aa23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 EIF3CQ99613 913 aaKnown RBP23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 STRN4Q9NRL3 753 aa23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 AATFQ9NY61 560 aaKnown RBP eCLIP23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 TAOK2Q9UL54 1235 aa23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 MYO6Q9UM54 1294 aa23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 PCDHB6Q9Y5E3 794 aa23.25■■□□□ 1.31
LYSMD4-209ENST00000496108 LRRIQ3A6PVS8 624 aaPredicted RBP23.24■■□□□ 1.31
LYSMD4-209ENST00000496108 TTC31Q49AM3 519 aaPredicted RBP23.24■■□□□ 1.31
LYSMD4-209ENST00000496108 FOXR1Q6PIV2 292 aa23.24■■□□□ 1.31
LYSMD4-209ENST00000496108 CYP26C1Q6V0L0 522 aa23.24■■□□□ 1.31
LYSMD4-209ENST00000496108 ACRBPQ8NEB7 543 aa23.24■■□□□ 1.31
LYSMD4-209ENST00000496108 GSDMAQ96QA5 445 aa23.24■■□□□ 1.31
LYSMD4-209ENST00000496108 MYL10Q9BUA6 226 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms