RNA–Protein interactions for RNA: ENST00000496055.5

RABGGTB-213, Transcript of Rab geranylgeranyltransferase subunit beta, humanhuman

TSL 2

Gene RABGGTB, Length 3,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTB-213ENST00000496055 FAXDC2Q96IV6 333 aa5.29□□□□□ -1.56
RABGGTB-213ENST00000496055 RPS6KC1Q96S38 1066 aa5.29□□□□□ -1.56
RABGGTB-213ENST00000496055 FAM117AQ9C073 453 aa5.29□□□□□ -1.56
RABGGTB-213ENST00000496055 ANKRD2Q9GZV1 360 aa5.29□□□□□ -1.56
RABGGTB-213ENST00000496055 IFT122Q9HBG6 1241 aa5.29□□□□□ -1.56
RABGGTB-213ENST00000496055 TRMT1Q9NXH9 659 aaKnown RBP5.29□□□□□ -1.56
RABGGTB-213ENST00000496055 SAGE1Q9NXZ1 904 aa5.29□□□□□ -1.56
RABGGTB-213ENST00000496055 MYH14Q7Z406 1995 aaKnown RBP5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 ENPP1P22413 925 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 HNRNPH2P55795 449 aaKnown RBP5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 COL19A1Q14993 1142 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 AGBL3Q8NEM8 1001 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 MPHOSPH8Q99549 860 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 RTFDC1Q9BY42 306 aaPredicted RBP5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 G3BP2Q9UN86 482 aaKnown RBP5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 DYTNA2CJ06 578 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 PRAMEF22A3QJZ6 481 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 HIP1RO75146 1068 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 ALDH1A1P00352 501 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 CA8P35219 290 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 RPS6KA3P51812 740 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 ZCCHC8Q6NZY4 707 aaKnown RBP5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 TMEM110Q86TL2 294 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 FMNL3Q8IVF7 1028 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 TRIM42Q8IWZ5 723 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 RBM12BQ8IXT5 1001 aaKnown RBP5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 THUMPD2Q9BTF0 503 aaKnown RBP5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 GLIS2Q9BZE0 524 aaPredicted RBP5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 IP6K2Q9UHH9 426 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 F8VZ95 297 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 ECE2O60344 883 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 PDE8AO60658 829 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 TCF3P15923 654 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 PDCD2Q16342 344 aaPredicted RBP5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 SLC5A9Q2M3M2 681 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 OTUD6AQ7L8S5 288 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 DRAXINQ8NBI3 349 aaPredicted RBP5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 CCDC191Q8NCU4 936 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 UBXN4Q92575 508 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 VMP1Q96GC9 406 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 ZNF512BQ96KM6 892 aaPredicted RBP5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 PLEKHG4BQ96PX9 1271 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 GRPEL1Q9HAV7 217 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 CD248Q9HCU0 757 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 ABCC12Q96J65 1359 aa5.28□□□□□ -1.56
RABGGTB-213ENST00000496055 XDHP47989 1333 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 MTA2O94776 668 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 USP17L8P0C7I0 530 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 SCNN1DP51172 638 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 SESN3P58005 492 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 SF3B3Q15393 1217 aaKnown RBP5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 E2F4Q16254 413 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 SFMBT2Q5VUG0 894 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 PODNQ7Z5L7 613 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 APOBEC3FQ8IUX4 373 aaKnown RBP5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 PDCL2Q8N4E4 241 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 MYRIPQ8NFW9 859 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 SH3GL3Q99963 347 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 ALDH8A1Q9H2A2 487 aaPredicted RBP5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 TMCC3Q9ULS5 477 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 SCN7AQ01118 1682 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 KRT38O76015 456 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 SLC4A3P48751 1232 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 NSUN2Q08J23 767 aaKnown RBP eCLIP5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 WASHC5Q12768 1159 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 NOLC1Q14978 699 aaKnown RBP eCLIP5.27□□□□□ -1.573e-45■■■■■ 92.7
RABGGTB-213ENST00000496055 PKN1Q16512 942 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 CTU1Q7Z7A3 348 aaKnown RBP5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 PLPP6Q8IY26 295 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 HOOK2Q96ED9 719 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 CRACR2AQ9BSW2 395 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 CENPOQ9BU64 300 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 SLC7A5P2Q9GIP4 190 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 HOXC10Q9NYD6 342 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 SLC45A1Q9Y2W3 748 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 MORC2Q9Y6X9 1032 aaPredicted RBP5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 SCN4AP35499 1836 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 USP17L3A6NCW0 530 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 USP17L4A6NCW7 530 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 PPP1R12BO60237 982 aaPredicted RBP5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 SASH1O94885 1247 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 FMNL1O95466 1100 aaPredicted RBP5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 LDHCP07864 332 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 U2AF2P26368 475 aaKnown RBP eCLIP5.27□□□□□ -1.574e-8■■■□□ 16.3
RABGGTB-213ENST00000496055 HOXD10P28358 340 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 CLK1P49759 484 aaKnown RBP5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 PPP2R5BQ15173 497 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 USP17L1Q7RTZ2 530 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 LMNTD2Q8IXW0 634 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 EFCAB13Q8IY85 973 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 MPP4Q96JB8 637 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 MYD88Q99836 296 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 DBNDD1Q9H9R9 158 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 TMOD2Q9NZR1 351 aa5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 COL3A1P02461 1466 aaPredicted RBP5.27□□□□□ -1.57
RABGGTB-213ENST00000496055 hCG_2014768A0A024R1R8 64 aa5.26□□□□□ -1.57
RABGGTB-213ENST00000496055 A0A1B0GUL7 405 aa5.26□□□□□ -1.57
RABGGTB-213ENST00000496055 TRAF5O00463 557 aa5.26□□□□□ -1.57
RABGGTB-213ENST00000496055 NEBLO76041 1014 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms