RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 RGL4Q8IZJ4 473 aa9.57□□□□□ -0.88
RPGR-210ENST00000494841 BCL2L13Q9BXK5 485 aa9.57□□□□□ -0.88
RPGR-210ENST00000494841 PHAXQ9H814 394 aaKnown RBP9.57□□□□□ -0.88
RPGR-210ENST00000494841 SOS1Q07889 1333 aaPredicted RBP9.56□□□□□ -0.88
RPGR-210ENST00000494841 EPB42P16452 691 aa9.56□□□□□ -0.88
RPGR-210ENST00000494841 IL6STP40189 918 aaPredicted RBP9.56□□□□□ -0.88
RPGR-210ENST00000494841 ARHGAP4P98171 946 aa9.56□□□□□ -0.88
RPGR-210ENST00000494841 TTLL7Q6ZT98 887 aa9.56□□□□□ -0.88
RPGR-210ENST00000494841 COPS6Q7L5N1 327 aa9.56□□□□□ -0.88
RPGR-210ENST00000494841 LRP10Q7Z4F1 713 aa9.56□□□□□ -0.88
RPGR-210ENST00000494841 SSH1Q8WYL5 1049 aa9.56□□□□□ -0.88
RPGR-210ENST00000494841 DDX21Q9NR30 783 aaKnown RBP eCLIP9.56□□□□□ -0.88
RPGR-210ENST00000494841 DBF4Q9UBU7 674 aaPredicted RBP9.56□□□□□ -0.88
RPGR-210ENST00000494841 PNPLA7Q6ZV29 1317 aa9.56□□□□□ -0.88
RPGR-210ENST00000494841 BCAR3O75815 825 aa9.55□□□□□ -0.88
RPGR-210ENST00000494841 BMP4P12644 408 aa9.55□□□□□ -0.88
RPGR-210ENST00000494841 SPEM2Q0P670 501 aa9.55□□□□□ -0.88
RPGR-210ENST00000494841 ALKBH2Q6NS38 261 aa9.55□□□□□ -0.88
RPGR-210ENST00000494841 GPR152Q8TDT2 470 aa9.55□□□□□ -0.88
RPGR-210ENST00000494841 XAGE3Q8WTP9 111 aa9.55□□□□□ -0.88
RPGR-210ENST00000494841 SLC30A3Q99726 388 aa9.55□□□□□ -0.88
RPGR-210ENST00000494841 STK31Q9BXU1 1019 aa9.55□□□□□ -0.88
RPGR-210ENST00000494841 SRP68Q9UHB9 627 aaKnown RBP9.55□□□□□ -0.88
RPGR-210ENST00000494841 KCNMB2Q9Y691 235 aa9.55□□□□□ -0.88
RPGR-210ENST00000494841 FZD6O60353 706 aa9.54□□□□□ -0.88
RPGR-210ENST00000494841 HMGB2P26583 209 aaKnown RBP9.54□□□□□ -0.88
RPGR-210ENST00000494841 RFC4P35249 363 aa9.54□□□□□ -0.88
RPGR-210ENST00000494841 RARSP54136 660 aaKnown RBP9.54□□□□□ -0.88
RPGR-210ENST00000494841 SRSF11Q05519 484 aaKnown RBP9.54□□□□□ -0.88
RPGR-210ENST00000494841 TRIP4Q15650 581 aaPredicted RBP9.54□□□□□ -0.88
RPGR-210ENST00000494841 USPL1Q5W0Q7 1092 aa9.54□□□□□ -0.88
RPGR-210ENST00000494841 NPM2Q86SE8 214 aaKnown RBP9.54□□□□□ -0.88
RPGR-210ENST00000494841 HYPKQ9NX55 129 aa9.54□□□□□ -0.88
RPGR-210ENST00000494841 FAM13BQ9NYF5 915 aa9.54□□□□□ -0.88
RPGR-210ENST00000494841 COL15A1P39059 1388 aa9.53□□□□□ -0.88
RPGR-210ENST00000494841 MAP2K3P46734 347 aa9.53□□□□□ -0.88
RPGR-210ENST00000494841 HLFQ16534 295 aa9.53□□□□□ -0.88
RPGR-210ENST00000494841 PIK3R5Q8WYR1 880 aa9.53□□□□□ -0.88
RPGR-210ENST00000494841 EDEM1Q92611 657 aa9.53□□□□□ -0.88
RPGR-210ENST00000494841 CHMP4AQ9BY43 222 aa9.53□□□□□ -0.88
RPGR-210ENST00000494841 SMC4Q9NTJ3 1288 aa9.53□□□□□ -0.88
RPGR-210ENST00000494841 CACNA1FO60840 1977 aa9.53□□□□□ -0.88
RPGR-210ENST00000494841 A0A087WZG4 1122 aa9.52□□□□□ -0.89
RPGR-210ENST00000494841 WIPF1O43516 503 aa9.52□□□□□ -0.89
RPGR-210ENST00000494841 ZBTB7AO95365 584 aa9.52□□□□□ -0.89
RPGR-210ENST00000494841 PDGFAP04085 211 aa9.52□□□□□ -0.89
RPGR-210ENST00000494841 C4AP0C0L4 1744 aa9.52□□□□□ -0.89
RPGR-210ENST00000494841 CT47B1P0C2W7 299 aaPredicted RBP9.52□□□□□ -0.89
RPGR-210ENST00000494841 SLURP2P0DP57 97 aa9.52□□□□□ -0.89
RPGR-210ENST00000494841 MZF1P28698 734 aaPredicted RBP9.52□□□□□ -0.89
RPGR-210ENST00000494841 DNM1Q05193 864 aaKnown RBP9.52□□□□□ -0.89
RPGR-210ENST00000494841 ALDH1L2Q3SY69 923 aa9.52□□□□□ -0.89
RPGR-210ENST00000494841 MSL1Q68DK7 614 aa9.52□□□□□ -0.89
RPGR-210ENST00000494841 RAB44Q7Z6P3 723 aaPredicted RBP9.52□□□□□ -0.89
RPGR-210ENST00000494841 CMTR1Q8N1G2 835 aaKnown RBP9.52□□□□□ -0.89
RPGR-210ENST00000494841 FLAD1Q8NFF5 587 aa9.52□□□□□ -0.89
RPGR-210ENST00000494841 ZNF428Q96B54 188 aa9.52□□□□□ -0.89
RPGR-210ENST00000494841 GSX2Q9BZM3 304 aa9.52□□□□□ -0.89
RPGR-210ENST00000494841 NARFQ9UHQ1 456 aa9.52□□□□□ -0.89
RPGR-210ENST00000494841 NOB1Q9ULX3 412 aaKnown RBP9.52□□□□□ -0.89
RPGR-210ENST00000494841 NSFL1CQ9UNZ2 370 aaKnown RBP9.52□□□□□ -0.89
RPGR-210ENST00000494841 QSER1Q2KHR3 1735 aa9.51□□□□□ -0.89
RPGR-210ENST00000494841 CAMTA2O94983 1202 aa9.51□□□□□ -0.89
RPGR-210ENST00000494841 EGFRP00533 1210 aa9.51□□□□□ -0.89
RPGR-210ENST00000494841 GYS1P13807 737 aa9.51□□□□□ -0.89
RPGR-210ENST00000494841 ZNF468Q5VIY5 522 aaPredicted RBP9.51□□□□□ -0.89
RPGR-210ENST00000494841 KIF6Q6ZMV9 814 aa9.51□□□□□ -0.89
RPGR-210ENST00000494841 C11orf16Q9NQ32 467 aa9.51□□□□□ -0.89
RPGR-210ENST00000494841 BIN2Q9UBW5 565 aaPredicted RBP9.51□□□□□ -0.89
RPGR-210ENST00000494841 RCAN3Q9UKA8 241 aa9.51□□□□□ -0.89
RPGR-210ENST00000494841 POLIQ9UNA4 740 aa9.51□□□□□ -0.89
RPGR-210ENST00000494841 NUP98P52948 1817 aa9.51□□□□□ -0.89
RPGR-210ENST00000494841 MAP3K15Q6ZN16 1313 aa9.51□□□□□ -0.89
RPGR-210ENST00000494841 USP42Q9H9J4 1324 aaKnown RBP9.51□□□□□ -0.89
RPGR-210ENST00000494841 PI4KAP2A4QPH2 592 aa9.5□□□□□ -0.89
RPGR-210ENST00000494841 F6X3S4 739 aa9.5□□□□□ -0.89
RPGR-210ENST00000494841 XYLBO75191 536 aa9.5□□□□□ -0.89
RPGR-210ENST00000494841 AAMPQ13685 434 aa9.5□□□□□ -0.89
RPGR-210ENST00000494841 CCINQ13939 588 aa9.5□□□□□ -0.89
RPGR-210ENST00000494841 TBC1D9BQ66K14 1250 aa9.5□□□□□ -0.89
RPGR-210ENST00000494841 PI4KAP1Q8N8J0 262 aa9.5□□□□□ -0.89
RPGR-210ENST00000494841 PLBD2Q8NHP8 589 aa9.5□□□□□ -0.89
RPGR-210ENST00000494841 FRAT1Q92837 279 aaPredicted RBP9.5□□□□□ -0.89
RPGR-210ENST00000494841 TNNQ9UQP3 1299 aa9.5□□□□□ -0.89
RPGR-210ENST00000494841 MAP3K2Q9Y2U5 619 aa9.5□□□□□ -0.89
RPGR-210ENST00000494841 ERVV-1B6SEH8 477 aa9.49□□□□□ -0.89
RPGR-210ENST00000494841 PLIN1O60240 522 aa9.49□□□□□ -0.89
RPGR-210ENST00000494841 ARAFP10398 606 aa9.49□□□□□ -0.89
RPGR-210ENST00000494841 KSR2Q6VAB6 950 aa9.49□□□□□ -0.89
RPGR-210ENST00000494841 SND1Q7KZF4 910 aaKnown RBP eCLIP9.49□□□□□ -0.89
RPGR-210ENST00000494841 AVENQ9NQS1 362 aaPredicted RBP9.49□□□□□ -0.89
RPGR-210ENST00000494841 KLF15Q9UIH9 416 aa9.49□□□□□ -0.89
RPGR-210ENST00000494841 PRR12Q9ULL5 1215 aa9.49□□□□□ -0.89
RPGR-210ENST00000494841 CASZ1Q86V15 1759 aa9.49□□□□□ -0.89
RPGR-210ENST00000494841 ADCY9O60503 1353 aa9.49□□□□□ -0.89
RPGR-210ENST00000494841 GOLGB1Q14789 3259 aaKnown RBP9.48□□□□□ -0.89
RPGR-210ENST00000494841 FAM177BA6PVY3 158 aa9.48□□□□□ -0.89
RPGR-210ENST00000494841 DDX58O95786 925 aaKnown RBP9.48□□□□□ -0.89
RPGR-210ENST00000494841 NFKB1P19838 968 aa9.48□□□□□ -0.89
RPGR-210ENST00000494841 GPTP24298 496 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms