RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 AMPD2Q01433 879 aa17.49■□□□□ 0.39
SDF4-207ENST00000494748 ZNF569Q5MCW4 686 aa17.49■□□□□ 0.39
SDF4-207ENST00000494748 SLC35F6Q8N357 371 aa17.49■□□□□ 0.39
SDF4-207ENST00000494748 IGSF22Q8N9C0 903 aa17.49■□□□□ 0.39
SDF4-207ENST00000494748 TMEM87BQ96K49 555 aa17.49■□□□□ 0.39
SDF4-207ENST00000494748 NLRP2Q9NX02 1062 aa17.49■□□□□ 0.39
SDF4-207ENST00000494748 DACH1Q9UI36 760 aa17.49■□□□□ 0.39
SDF4-207ENST00000494748 WDR17Q8IZU2 1322 aa17.49■□□□□ 0.39
SDF4-207ENST00000494748 FXR1P51114 621 aaKnown RBP eCLIP17.49■□□□□ 0.39
SDF4-207ENST00000494748 SHISA4Q96DD7 197 aa17.49■□□□□ 0.39
SDF4-207ENST00000494748 CDC5LQ99459 802 aaKnown RBP17.49■□□□□ 0.39
SDF4-207ENST00000494748 LRRIQ3A6PVS8 624 aaPredicted RBP17.48■□□□□ 0.39
SDF4-207ENST00000494748 POTEB2H3BUK9 544 aa17.48■□□□□ 0.39
SDF4-207ENST00000494748 ERVK-24P63145 666 aa17.48■□□□□ 0.39
SDF4-207ENST00000494748 CASP8Q14790 479 aa17.48■□□□□ 0.39
SDF4-207ENST00000494748 KCNJ14Q9UNX9 436 aa17.48■□□□□ 0.39
SDF4-207ENST00000494748 GOLGA8AA7E2F4 631 aa17.48■□□□□ 0.39
SDF4-207ENST00000494748 RNF225M0QZC1 329 aaPredicted RBP17.48■□□□□ 0.39
SDF4-207ENST00000494748 SH3RF1Q7Z6J0 888 aa17.48■□□□□ 0.39
SDF4-207ENST00000494748 ACRBPQ8NEB7 543 aa17.48■□□□□ 0.39
SDF4-207ENST00000494748 SLC26A6Q9BXS9 759 aa17.48■□□□□ 0.39
SDF4-207ENST00000494748 HOOK1Q9UJC3 728 aaKnown RBP17.48■□□□□ 0.39
SDF4-207ENST00000494748 SRPRBQ9Y5M8 271 aaKnown RBP17.48■□□□□ 0.39
SDF4-207ENST00000494748 KIF5CO60282 957 aa17.48■□□□□ 0.39
SDF4-207ENST00000494748 NOA1Q8NC60 698 aaKnown RBP17.48■□□□□ 0.39
SDF4-207ENST00000494748 ZBTB3Q9H5J0 574 aa17.48■□□□□ 0.39
SDF4-207ENST00000494748 TCRBV5S4A2TA0A5A2 114 aa17.47■□□□□ 0.39
SDF4-207ENST00000494748 TRDNQ13061 729 aa17.47■□□□□ 0.39
SDF4-207ENST00000494748 TUBB2AQ13885 445 aa17.47■□□□□ 0.39
SDF4-207ENST00000494748 SPATA1Q5VX52 437 aa17.47■□□□□ 0.39
SDF4-207ENST00000494748 LMOD2Q6P5Q4 547 aa17.47■□□□□ 0.39
SDF4-207ENST00000494748 DIS3L2Q8IYB7 885 aaKnown RBP17.47■□□□□ 0.39
SDF4-207ENST00000494748 TUBB2BQ9BVA1 445 aa17.47■□□□□ 0.39
SDF4-207ENST00000494748 EFCC1Q9HA90 598 aa17.47■□□□□ 0.39
SDF4-207ENST00000494748 PIH1D3Q9NQM4 214 aaKnown RBP17.47■□□□□ 0.39
SDF4-207ENST00000494748 FBXO3Q9UK99 471 aa17.47■□□□□ 0.39
SDF4-207ENST00000494748 ZC3H4Q9UPT8 1303 aaKnown RBP17.47■□□□□ 0.39
SDF4-207ENST00000494748 ZNF142P52746 1687 aaPredicted RBP17.47■□□□□ 0.39
SDF4-207ENST00000494748 A1BGP04217 495 aa17.47■□□□□ 0.39
SDF4-207ENST00000494748 IFNAR1P17181 557 aa17.47■□□□□ 0.39
SDF4-207ENST00000494748 CASP14P31944 242 aa17.47■□□□□ 0.39
SDF4-207ENST00000494748 DPYDQ12882 1025 aa17.47■□□□□ 0.39
SDF4-207ENST00000494748 ISCA1Q9BUE6 129 aa17.47■□□□□ 0.39
SDF4-207ENST00000494748 CSRNP2Q9H175 543 aa17.47■□□□□ 0.39
SDF4-207ENST00000494748 LIFRP42702 1097 aa17.47■□□□□ 0.39
SDF4-207ENST00000494748 TRIM29Q14134 588 aa17.47■□□□□ 0.39
SDF4-207ENST00000494748 LRRC31Q6UY01 552 aa17.47■□□□□ 0.39
SDF4-207ENST00000494748 RHOXF2BP0C7M4 288 aa17.46■□□□□ 0.39
SDF4-207ENST00000494748 NR5A1Q13285 461 aa17.46■□□□□ 0.39
SDF4-207ENST00000494748 PLCD3Q8N3E9 789 aa17.46■□□□□ 0.39
SDF4-207ENST00000494748 CPLX3Q8WVH0 158 aa17.46■□□□□ 0.39
SDF4-207ENST00000494748 RHOXF2Q9BQY4 288 aa17.46■□□□□ 0.39
SDF4-207ENST00000494748 SHANK3Q9BYB0 1731 aa17.46■□□□□ 0.39
SDF4-207ENST00000494748 FOXP1Q9H334 677 aaPredicted RBP17.46■□□□□ 0.39
SDF4-207ENST00000494748 STRN4Q9NRL3 753 aa17.46■□□□□ 0.39
SDF4-207ENST00000494748 COL22A1Q8NFW1 1626 aaPredicted RBP17.46■□□□□ 0.39
SDF4-207ENST00000494748 ITIH6Q6UXX5 1313 aa17.46■□□□□ 0.39
SDF4-207ENST00000494748 CTAGE9A4FU28 777 aa17.46■□□□□ 0.39
SDF4-207ENST00000494748 PPP1R3GB7ZBB8 358 aa17.46■□□□□ 0.39
SDF4-207ENST00000494748 PDE4CQ08493 712 aa17.46■□□□□ 0.39
SDF4-207ENST00000494748 SSRP1Q08945 709 aaKnown RBP17.46■□□□□ 0.39
SDF4-207ENST00000494748 ZFP91Q96JP5 570 aaPredicted RBP17.46■□□□□ 0.39
SDF4-207ENST00000494748 EPB41L4AQ9HCS5 686 aaPredicted RBP17.46■□□□□ 0.39
SDF4-207ENST00000494748 CASP1P29466 404 aa17.46■□□□□ 0.38
SDF4-207ENST00000494748 CPLX2Q6PUV4 134 aaKnown RBP17.46■□□□□ 0.38
SDF4-207ENST00000494748 OXER1Q8TDS5 423 aa17.46■□□□□ 0.38
SDF4-207ENST00000494748 ZSWIM5Q9P217 1185 aa17.46■□□□□ 0.38
SDF4-207ENST00000494748 SYNRGQ9UMZ2 1314 aa17.45■□□□□ 0.38
SDF4-207ENST00000494748 CABP4P57796 275 aa17.45■□□□□ 0.38
SDF4-207ENST00000494748 KRT28Q7Z3Y7 464 aa17.45■□□□□ 0.38
SDF4-207ENST00000494748 IVLP07476 585 aa17.45■□□□□ 0.38
SDF4-207ENST00000494748 RILPL1Q5EBL4 403 aa17.45■□□□□ 0.38
SDF4-207ENST00000494748 TMEM67Q5HYA8 995 aa17.45■□□□□ 0.38
SDF4-207ENST00000494748 CT47A1Q5JQC4 288 aaPredicted RBP17.45■□□□□ 0.38
SDF4-207ENST00000494748 WDR93Q6P2C0 686 aa17.45■□□□□ 0.38
SDF4-207ENST00000494748 FAM71BQ8TC56 605 aa17.45■□□□□ 0.38
SDF4-207ENST00000494748 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.45■□□□□ 0.38
SDF4-207ENST00000494748 CSF1RP07333 972 aa17.44■□□□□ 0.38
SDF4-207ENST00000494748 WHAMMP3Q1A5X7 153 aa17.44■□□□□ 0.38
SDF4-207ENST00000494748 KIF4BQ2VIQ3 1234 aa17.44■□□□□ 0.38
SDF4-207ENST00000494748 ZNF512BQ96KM6 892 aaPredicted RBP17.44■□□□□ 0.38
SDF4-207ENST00000494748 PRPF6O94906 941 aaKnown RBP17.44■□□□□ 0.38
SDF4-207ENST00000494748 SYF2O95926 243 aaKnown RBP17.44■□□□□ 0.38
SDF4-207ENST00000494748 STX17P56962 302 aa17.44■□□□□ 0.38
SDF4-207ENST00000494748 CCDC57Q2TAC2 916 aa17.44■□□□□ 0.38
SDF4-207ENST00000494748 REXO2Q9Y3B8 237 aaKnown RBP17.44■□□□□ 0.38
SDF4-207ENST00000494748 RIPOR2Q9Y4F9 1068 aa17.44■□□□□ 0.38
SDF4-207ENST00000494748 ERLIN1O75477 346 aa17.44■□□□□ 0.38
SDF4-207ENST00000494748 TUBB4BP68371 445 aa17.44■□□□□ 0.38
SDF4-207ENST00000494748 UBE3CQ15386 1083 aa17.44■□□□□ 0.38
SDF4-207ENST00000494748 PPFIBP1Q86W92 1011 aa17.44■□□□□ 0.38
SDF4-207ENST00000494748 SMYD4Q8IYR2 804 aaPredicted RBP17.44■□□□□ 0.38
SDF4-207ENST00000494748 NAPGQ99747 312 aaPredicted RBP17.44■□□□□ 0.38
SDF4-207ENST00000494748 TTF2Q9UNY4 1162 aaKnown RBP17.44■□□□□ 0.38
SDF4-207ENST00000494748 SEMA3EO15041 775 aa17.43■□□□□ 0.38
SDF4-207ENST00000494748 AARSP49588 968 aaKnown RBP eCLIP17.43■□□□□ 0.383e-7■□□□□ 10.5
SDF4-207ENST00000494748 KANK3Q6NY19 840 aa17.43■□□□□ 0.38
SDF4-207ENST00000494748 LEKR1Q6ZMV7 388 aa17.43■□□□□ 0.38
SDF4-207ENST00000494748 VGLL2Q8N8G2 317 aa17.43■□□□□ 0.38
SDF4-207ENST00000494748 STRBPQ96SI9 672 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms