RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 IFFO2Q5TF58 517 aa13.27□□□□□ -0.29
APTX-230ENST00000494649 TATDN1Q6P1N9 297 aa13.27□□□□□ -0.29
APTX-230ENST00000494649 AKR1B1P15121 316 aa13.26□□□□□ -0.29
APTX-230ENST00000494649 PTH1RQ03431 593 aa13.26□□□□□ -0.29
APTX-230ENST00000494649 ZYXQ15942 572 aaKnown RBP13.26□□□□□ -0.29
APTX-230ENST00000494649 ABCB5Q2M3G0 1257 aa13.26□□□□□ -0.29
APTX-230ENST00000494649 NOL9Q5SY16 702 aaKnown RBP13.26□□□□□ -0.29
APTX-230ENST00000494649 GIMAP6Q6P9H5 292 aa13.26□□□□□ -0.29
APTX-230ENST00000494649 ZBTB21Q9ULJ3 1066 aa13.26□□□□□ -0.29
APTX-230ENST00000494649 SPP2Q13103 211 aa13.25□□□□□ -0.29
APTX-230ENST00000494649 SBK1Q52WX2 424 aa13.25□□□□□ -0.29
APTX-230ENST00000494649 C16orf86Q6ZW13 317 aa13.25□□□□□ -0.29
APTX-230ENST00000494649 MKNK2Q9HBH9 465 aa13.25□□□□□ -0.29
APTX-230ENST00000494649 TOMM22Q9NS69 142 aa13.25□□□□□ -0.29
APTX-230ENST00000494649 TACC3Q9Y6A5 838 aa13.25□□□□□ -0.29
APTX-230ENST00000494649 DOCK1Q14185 1865 aa13.25□□□□□ -0.29
APTX-230ENST00000494649 SGSM2O43147 1006 aa13.25□□□□□ -0.29
APTX-230ENST00000494649 ZBTB48P10074 688 aaPredicted RBP13.25□□□□□ -0.29
APTX-230ENST00000494649 MFAP1P55081 439 aaKnown RBP13.25□□□□□ -0.29
APTX-230ENST00000494649 PPATQ06203 517 aa13.25□□□□□ -0.29
APTX-230ENST00000494649 SEPT2Q15019 361 aa13.25□□□□□ -0.29
APTX-230ENST00000494649 FAM47AQ5JRC9 791 aa13.25□□□□□ -0.29
APTX-230ENST00000494649 RRP12Q5JTH9 1297 aaKnown RBP13.25□□□□□ -0.29
APTX-230ENST00000494649 RUFY2Q8WXA3 655 aa13.25□□□□□ -0.29
APTX-230ENST00000494649 ATAD5Q96QE3 1844 aa13.25□□□□□ -0.29
APTX-230ENST00000494649 CCL15-CCL14A0A0B4J2E2 113 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 ASNSP08243 561 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 MAP2K2P36507 400 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 CCL15Q16663 113 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 MS4A4AQ96JQ5 239 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 PTPN18Q99952 460 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 LAMB1P07942 1786 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 IGF2BP3O00425 579 aaKnown RBP eCLIP13.24□□□□□ -0.29
APTX-230ENST00000494649 CDC45O75419 566 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 TRPA1O75762 1119 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 HSPA1AP0DMV8 641 aaKnown RBP13.24□□□□□ -0.29
APTX-230ENST00000494649 HSPA1BP0DMV9 641 aaKnown RBP13.24□□□□□ -0.29
APTX-230ENST00000494649 GUCY1A2P33402 732 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 ATP2B2Q01814 1243 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 PPIL2Q13356 520 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 MTMR2Q13614 643 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 JMYQ8N9B5 988 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 BRI3BPQ8WY22 251 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 CHMP4CQ96CF2 233 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 ESYT1Q9BSJ8 1104 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 CABP5Q9NP86 173 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 ANO2Q9NQ90 1003 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 SWAP70Q9UH65 585 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 AFG3L2Q9Y4W6 797 aa13.24□□□□□ -0.29
APTX-230ENST00000494649 UNCXA6NJT0 531 aa13.23□□□□□ -0.29
APTX-230ENST00000494649 USP17L5A8MUK1 530 aa13.23□□□□□ -0.29
APTX-230ENST00000494649 RASA1P20936 1047 aa13.23□□□□□ -0.29
APTX-230ENST00000494649 HMGCS2P54868 508 aa13.23□□□□□ -0.29
APTX-230ENST00000494649 GADL1Q6ZQY3 521 aa13.23□□□□□ -0.29
APTX-230ENST00000494649 TICAM2Q86XR7 235 aa13.23□□□□□ -0.29
APTX-230ENST00000494649 TBC1D10CQ8IV04 446 aa13.23□□□□□ -0.29
APTX-230ENST00000494649 NKX2-3Q8TAU0 364 aa13.23□□□□□ -0.29
APTX-230ENST00000494649 ACER1Q8TDN7 264 aa13.23□□□□□ -0.29
APTX-230ENST00000494649 NBPF3Q9H094 633 aa13.23□□□□□ -0.29
APTX-230ENST00000494649 ECM2O94769 699 aaPredicted RBP13.22□□□□□ -0.29
APTX-230ENST00000494649 GTF2A2P52657 109 aa13.22□□□□□ -0.29
APTX-230ENST00000494649 SNAPC2Q13487 334 aa13.22□□□□□ -0.29
APTX-230ENST00000494649 FAM43AQ8N2R8 423 aa13.22□□□□□ -0.29
APTX-230ENST00000494649 ZNF280CQ8ND82 737 aa13.22□□□□□ -0.29
APTX-230ENST00000494649 BEGAINQ9BUH8 593 aa13.22□□□□□ -0.29
APTX-230ENST00000494649 RAD50Q92878 1312 aa13.22□□□□□ -0.29
APTX-230ENST00000494649 MYH8P13535 1937 aa13.22□□□□□ -0.29
APTX-230ENST00000494649 ROBO3Q96MS0 1386 aa13.22□□□□□ -0.29
APTX-230ENST00000494649 MANSC4A6NHS7 340 aaPredicted RBP13.22□□□□□ -0.29
APTX-230ENST00000494649 ZNF213O14771 459 aa13.22□□□□□ -0.29
APTX-230ENST00000494649 RAD21O60216 631 aa13.22□□□□□ -0.29
APTX-230ENST00000494649 RANBP6O60518 1105 aaKnown RBP13.22□□□□□ -0.29
APTX-230ENST00000494649 TBC1D8O95759 1140 aa13.22□□□□□ -0.29
APTX-230ENST00000494649 MAP2K1Q02750 393 aaPredicted RBP13.22□□□□□ -0.29
APTX-230ENST00000494649 PDE4BQ07343 736 aa13.22□□□□□ -0.29
APTX-230ENST00000494649 ZNF444Q8N0Y2 327 aaPredicted RBP13.22□□□□□ -0.29
APTX-230ENST00000494649 FEZ1Q99689 392 aa13.22□□□□□ -0.29
APTX-230ENST00000494649 DSCC1Q9BVC3 393 aa13.22□□□□□ -0.29
APTX-230ENST00000494649 WBP1LQ9NX94 342 aa13.22□□□□□ -0.29
APTX-230ENST00000494649 TAF6LQ9Y6J9 622 aa13.22□□□□□ -0.29
APTX-230ENST00000494649 NMT2O60551 498 aa13.21□□□□□ -0.29
APTX-230ENST00000494649 SLC3A2P08195 630 aaKnown RBP13.21□□□□□ -0.29
APTX-230ENST00000494649 SREBF2Q12772 1141 aa13.21□□□□□ -0.29
APTX-230ENST00000494649 ALX1Q15699 326 aa13.21□□□□□ -0.29
APTX-230ENST00000494649 CASC1Q6TDU7 716 aa13.21□□□□□ -0.29
APTX-230ENST00000494649 KIAA1211Q6ZU35 1233 aa13.21□□□□□ -0.29
APTX-230ENST00000494649 IFNL1Q8IU54 200 aa13.21□□□□□ -0.29
APTX-230ENST00000494649 RNF186Q9NXI6 227 aa13.21□□□□□ -0.29
APTX-230ENST00000494649 THSD7BQ9C0I4 1608 aa13.21□□□□□ -0.29
APTX-230ENST00000494649 NEDD4P46934 1319 aa13.21□□□□□ -0.29
APTX-230ENST00000494649 BTBD19C9JJ37 291 aa13.2□□□□□ -0.3
APTX-230ENST00000494649 FOXN1O15353 648 aa13.2□□□□□ -0.3
APTX-230ENST00000494649 TFAP4Q01664 338 aa13.2□□□□□ -0.3
APTX-230ENST00000494649 TREML2Q5T2D2 321 aa13.2□□□□□ -0.3
APTX-230ENST00000494649 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.2□□□□□ -0.3
APTX-230ENST00000494649 R3HDMLQ9H3Y0 253 aa13.2□□□□□ -0.3
APTX-230ENST00000494649 KCNH4Q9UQ05 1017 aa13.2□□□□□ -0.3
APTX-230ENST00000494649 PHIPQ8WWQ0 1821 aa13.2□□□□□ -0.3
APTX-230ENST00000494649 A0A1W2PRG0 241 aa13.2□□□□□ -0.3
APTX-230ENST00000494649 TSPY2A6NKD2 308 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms