RNA–Protein interactions for RNA: ENST00000494645.1

SEC23B-208, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 2

Gene SEC23B, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-208ENST00000494645 SPATA5Q8NB90 893 aa8.3□□□□□ -1.08
SEC23B-208ENST00000494645 DIS3LQ8TF46 1054 aaKnown RBP8.3□□□□□ -1.08
SEC23B-208ENST00000494645 PAWRQ96IZ0 340 aaKnown RBP8.3□□□□□ -1.08
SEC23B-208ENST00000494645 SNRKQ9NRH2 765 aa8.3□□□□□ -1.08
SEC23B-208ENST00000494645 STAP2Q9UGK3 403 aa8.3□□□□□ -1.08
SEC23B-208ENST00000494645 TNNQ9UQP3 1299 aa8.3□□□□□ -1.08
SEC23B-208ENST00000494645 SLC45A1Q9Y2W3 748 aa8.3□□□□□ -1.08
SEC23B-208ENST00000494645 MYH13Q9UKX3 1938 aa8.3□□□□□ -1.08
SEC23B-208ENST00000494645 LDHCP07864 332 aa8.29□□□□□ -1.08
SEC23B-208ENST00000494645 GNAI3P08754 354 aa8.29□□□□□ -1.08
SEC23B-208ENST00000494645 HOXB1P14653 301 aaPredicted RBP8.29□□□□□ -1.08
SEC23B-208ENST00000494645 RARSP54136 660 aaKnown RBP8.29□□□□□ -1.08
SEC23B-208ENST00000494645 IRF5Q13568 498 aa8.29□□□□□ -1.08
SEC23B-208ENST00000494645 C7orf61Q8IZ16 206 aa8.29□□□□□ -1.08
SEC23B-208ENST00000494645 ZNF280CQ8ND82 737 aa8.29□□□□□ -1.08
SEC23B-208ENST00000494645 PXYLP1Q8TE99 480 aa8.29□□□□□ -1.08
SEC23B-208ENST00000494645 SH3RF3Q8TEJ3 882 aaPredicted RBP8.29□□□□□ -1.08
SEC23B-208ENST00000494645 FRAT1Q92837 279 aaPredicted RBP8.29□□□□□ -1.08
SEC23B-208ENST00000494645 NSUN4Q96CB9 384 aaKnown RBP8.29□□□□□ -1.08
SEC23B-208ENST00000494645 OSBPL5Q9H0X9 879 aaPredicted RBP8.29□□□□□ -1.08
SEC23B-208ENST00000494645 LRP2BPQ9P2M1 347 aa8.29□□□□□ -1.08
SEC23B-208ENST00000494645 PNMA3Q9UL41 463 aa8.29□□□□□ -1.08
SEC23B-208ENST00000494645 MYH2Q9UKX2 1941 aa8.29□□□□□ -1.08
SEC23B-208ENST00000494645 PDS5AQ29RF7 1337 aaKnown RBP8.29□□□□□ -1.08
SEC23B-208ENST00000494645 PNMA6EA0A0J9YXQ4 647 aa8.28□□□□□ -1.08
SEC23B-208ENST00000494645 USP17L5A8MUK1 530 aa8.28□□□□□ -1.08
SEC23B-208ENST00000494645 SOX1O00570 391 aaPredicted RBP8.28□□□□□ -1.08
SEC23B-208ENST00000494645 TBC1D12O60347 775 aa8.28□□□□□ -1.08
SEC23B-208ENST00000494645 CAP2P40123 477 aa8.28□□□□□ -1.08
SEC23B-208ENST00000494645 MCAMP43121 646 aa8.28□□□□□ -1.08
SEC23B-208ENST00000494645 JAG1P78504 1218 aa8.28□□□□□ -1.08
SEC23B-208ENST00000494645 G3BP1Q13283 466 aaKnown RBP eCLIP8.28□□□□□ -1.082e-8■■□□□ 12.4
SEC23B-208ENST00000494645 MTMR2Q13614 643 aa8.28□□□□□ -1.08
SEC23B-208ENST00000494645 FAM110CQ1W6H9 321 aa8.28□□□□□ -1.08
SEC23B-208ENST00000494645 SHROOM1Q2M3G4 852 aaPredicted RBP8.28□□□□□ -1.08
SEC23B-208ENST00000494645 PROCA1Q8NCQ7 364 aaPredicted RBP8.28□□□□□ -1.08
SEC23B-208ENST00000494645 CLUAP1Q96AJ1 413 aa8.28□□□□□ -1.08
SEC23B-208ENST00000494645 NOL10Q9BSC4 688 aaKnown RBP8.28□□□□□ -1.08
SEC23B-208ENST00000494645 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.28□□□□□ -1.08
SEC23B-208ENST00000494645 ASCC2Q9H1I8 757 aaPredicted RBP8.28□□□□□ -1.08
SEC23B-208ENST00000494645 PRO3102Q9H379 93 aa8.28□□□□□ -1.08
SEC23B-208ENST00000494645 PAK6Q9NQU5 681 aaPredicted RBP8.28□□□□□ -1.08
SEC23B-208ENST00000494645 AATFQ9NY61 560 aaKnown RBP eCLIP8.28□□□□□ -1.08
SEC23B-208ENST00000494645 SAP30BPQ9UHR5 308 aaKnown RBP8.28□□□□□ -1.08
SEC23B-208ENST00000494645 ZMYND8Q9ULU4 1186 aaPredicted RBP8.28□□□□□ -1.08
SEC23B-208ENST00000494645 DOCK2Q92608 1830 aa8.28□□□□□ -1.08
SEC23B-208ENST00000494645 GDF11O95390 407 aa8.27□□□□□ -1.09
SEC23B-208ENST00000494645 HMGCRP04035 888 aa8.27□□□□□ -1.09
SEC23B-208ENST00000494645 GNAI2P04899 355 aa8.27□□□□□ -1.09
SEC23B-208ENST00000494645 CT47B1P0C2W7 299 aaPredicted RBP8.27□□□□□ -1.09
SEC23B-208ENST00000494645 SYN1P17600 705 aa8.27□□□□□ -1.09
SEC23B-208ENST00000494645 CYP2B6P20813 491 aa8.27□□□□□ -1.09
SEC23B-208ENST00000494645 ARID4AP29374 1257 aaPredicted RBP8.27□□□□□ -1.09
SEC23B-208ENST00000494645 GCLCP48506 637 aaPredicted RBP8.27□□□□□ -1.09
SEC23B-208ENST00000494645 IRX3P78415 501 aaPredicted RBP8.27□□□□□ -1.09
SEC23B-208ENST00000494645 PABPC4Q13310 644 aaKnown RBP eCLIP8.27□□□□□ -1.09
SEC23B-208ENST00000494645 OS9Q13438 667 aaPredicted RBP8.27□□□□□ -1.09
SEC23B-208ENST00000494645 TTC39AQ5SRH9 613 aa8.27□□□□□ -1.09
SEC23B-208ENST00000494645 NAA16Q6N069 864 aaPredicted RBP8.27□□□□□ -1.09
SEC23B-208ENST00000494645 NECAB2Q7Z6G3 386 aa8.27□□□□□ -1.09
SEC23B-208ENST00000494645 MAPKAPK5Q8IW41 473 aa8.27□□□□□ -1.09
SEC23B-208ENST00000494645 TGFBRAP1Q8WUH2 860 aa8.27□□□□□ -1.09
SEC23B-208ENST00000494645 LRCH3Q96II8 777 aa8.27□□□□□ -1.09
SEC23B-208ENST00000494645 P2RX7Q99572 595 aaKnown RBP8.27□□□□□ -1.09
SEC23B-208ENST00000494645 TRIM34Q9BYJ4 488 aa8.27□□□□□ -1.09
SEC23B-208ENST00000494645 CRISPLD2Q9H0B8 497 aa8.27□□□□□ -1.09
SEC23B-208ENST00000494645 GJD2Q9UKL4 321 aa8.27□□□□□ -1.09
SEC23B-208ENST00000494645 SZT2Q5T011 3432 aa8.27□□□□□ -1.09
SEC23B-208ENST00000494645 RANBP2P49792 3224 aaKnown RBP8.26□□□□□ -1.09
SEC23B-208ENST00000494645 BCAR3O75815 825 aa8.26□□□□□ -1.09
SEC23B-208ENST00000494645 UQCRFS1P1P0C7P4 283 aa8.26□□□□□ -1.09
SEC23B-208ENST00000494645 TRIM27P14373 513 aa8.26□□□□□ -1.09
SEC23B-208ENST00000494645 MTX1Q13505 466 aa8.26□□□□□ -1.09
SEC23B-208ENST00000494645 ADGRA1Q86SQ6 560 aa8.26□□□□□ -1.09
SEC23B-208ENST00000494645 CRACR2BQ8N4Y2 399 aaPredicted RBP8.26□□□□□ -1.09
SEC23B-208ENST00000494645 SLC17A8Q8NDX2 589 aa8.26□□□□□ -1.09
SEC23B-208ENST00000494645 AS3MTQ9HBK9 375 aa8.26□□□□□ -1.09
SEC23B-208ENST00000494645 HMX1Q9NP08 348 aaPredicted RBP8.26□□□□□ -1.09
SEC23B-208ENST00000494645 TMOD4Q9NZQ9 345 aa8.26□□□□□ -1.09
SEC23B-208ENST00000494645 PALD1Q9ULE6 856 aa8.26□□□□□ -1.09
SEC23B-208ENST00000494645 MGAMO43451 1857 aa8.26□□□□□ -1.09
SEC23B-208ENST00000494645 DOCK1Q14185 1865 aa8.26□□□□□ -1.09
SEC23B-208ENST00000494645 IPO8O15397 1037 aaKnown RBP8.25□□□□□ -1.09
SEC23B-208ENST00000494645 BAG3O95817 575 aa8.25□□□□□ -1.09
SEC23B-208ENST00000494645 MAP4K4O95819 1239 aaPredicted RBP8.25□□□□□ -1.09
SEC23B-208ENST00000494645 BACE1P56817 501 aa8.25□□□□□ -1.09
SEC23B-208ENST00000494645 DYNLL1P63167 89 aaKnown RBP8.25□□□□□ -1.09
SEC23B-208ENST00000494645 ZYXQ15942 572 aaKnown RBP8.25□□□□□ -1.09
SEC23B-208ENST00000494645 SH3D19Q5HYK7 790 aa8.25□□□□□ -1.09
SEC23B-208ENST00000494645 CCAR1Q8IX12 1150 aaKnown RBP8.25□□□□□ -1.09
SEC23B-208ENST00000494645 GPRC5AQ8NFJ5 357 aa8.25□□□□□ -1.09
SEC23B-208ENST00000494645 TRIB2Q92519 343 aa8.25□□□□□ -1.09
SEC23B-208ENST00000494645 ARHGAP45Q92619 1136 aa8.25□□□□□ -1.09
SEC23B-208ENST00000494645 DBNDD2Q9BQY9 259 aa8.25□□□□□ -1.09
SEC23B-208ENST00000494645 PAGR1Q9BTK6 254 aa8.25□□□□□ -1.09
SEC23B-208ENST00000494645 TBC1D2Q9BYX2 928 aa8.25□□□□□ -1.09
SEC23B-208ENST00000494645 NBPF3Q9H094 633 aa8.25□□□□□ -1.09
SEC23B-208ENST00000494645 C11orf49Q9H6J7 331 aa8.25□□□□□ -1.09
SEC23B-208ENST00000494645 C1orf115Q9H7X2 142 aa8.25□□□□□ -1.09
SEC23B-208ENST00000494645 DNAJC18Q9H819 358 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms