RNA–Protein interactions for RNA: ENST00000494573.6

LDHA-211, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,154 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-211ENST00000494573 NOSTRINQ8IVI9 506 aa12.96□□□□□ -0.33
LDHA-211ENST00000494573 CEP57L1Q8IYX8 460 aa12.96□□□□□ -0.33
LDHA-211ENST00000494573 WDR66Q8TBY9 1149 aa12.96□□□□□ -0.33
LDHA-211ENST00000494573 CERKQ8TCT0 537 aa12.96□□□□□ -0.33
LDHA-211ENST00000494573 SDF4Q9BRK5 362 aa12.96□□□□□ -0.33
LDHA-211ENST00000494573 NAT10Q9H0A0 1025 aaKnown RBP12.96□□□□□ -0.33
LDHA-211ENST00000494573 TFCP2L1Q9NZI6 479 aa12.96□□□□□ -0.33
LDHA-211ENST00000494573 KIAA1468Q9P260 1216 aa12.96□□□□□ -0.33
LDHA-211ENST00000494573 TRPC5Q9UL62 973 aaPredicted RBP12.96□□□□□ -0.33
LDHA-211ENST00000494573 HPSEQ9Y251 543 aa12.96□□□□□ -0.33
LDHA-211ENST00000494573 NRXN2Q9P2S2 1712 aa12.96□□□□□ -0.34
LDHA-211ENST00000494573 MYH8P13535 1937 aa12.96□□□□□ -0.34
LDHA-211ENST00000494573 MROH7-TTC4A0A0A0MT08 1334 aa12.95□□□□□ -0.34
LDHA-211ENST00000494573 PRPF3O43395 683 aaKnown RBP12.95□□□□□ -0.34
LDHA-211ENST00000494573 ZNF202O95125 648 aa12.95□□□□□ -0.34
LDHA-211ENST00000494573 PFKFB1P16118 471 aa12.95□□□□□ -0.34
LDHA-211ENST00000494573 HMGB2P26583 209 aaKnown RBP12.95□□□□□ -0.34
LDHA-211ENST00000494573 RBM6P78332 1123 aaKnown RBP12.95□□□□□ -0.34
LDHA-211ENST00000494573 CHAF1AQ13111 956 aaPredicted RBP12.95□□□□□ -0.34
LDHA-211ENST00000494573 RESP18Q5W5W9 173 aa12.95□□□□□ -0.34
LDHA-211ENST00000494573 CATIPQ7Z7H3 387 aa12.95□□□□□ -0.34
LDHA-211ENST00000494573 IQCA1Q86XH1 822 aa12.95□□□□□ -0.34
LDHA-211ENST00000494573 ELOA2Q8IYF1 753 aaPredicted RBP12.95□□□□□ -0.34
LDHA-211ENST00000494573 ENAHQ8N8S7 591 aaPredicted RBP12.95□□□□□ -0.34
LDHA-211ENST00000494573 CNBD1Q8NA66 436 aa12.95□□□□□ -0.34
LDHA-211ENST00000494573 QSER1Q2KHR3 1735 aa12.95□□□□□ -0.34
LDHA-211ENST00000494573 USP17L12C9JPN9 530 aa12.94□□□□□ -0.34
LDHA-211ENST00000494573 USP17L21D6R901 530 aa12.94□□□□□ -0.34
LDHA-211ENST00000494573 NPHP1O15259 732 aa12.94□□□□□ -0.34
LDHA-211ENST00000494573 WDHD1O75717 1129 aaPredicted RBP12.94□□□□□ -0.34
LDHA-211ENST00000494573 XBP1P17861 261 aa12.94□□□□□ -0.34
LDHA-211ENST00000494573 NLRP12P59046 1061 aa12.94□□□□□ -0.34
LDHA-211ENST00000494573 GSTO1P78417 241 aa12.94□□□□□ -0.34
LDHA-211ENST00000494573 RILPL1Q5EBL4 403 aa12.94□□□□□ -0.34
LDHA-211ENST00000494573 SLC27A3Q5K4L6 730 aa12.94□□□□□ -0.34
LDHA-211ENST00000494573 IFIT1BQ5T764 474 aaKnown RBP12.94□□□□□ -0.34
LDHA-211ENST00000494573 ZNF804AQ7Z570 1209 aa12.94□□□□□ -0.34
LDHA-211ENST00000494573 CERS3Q8IU89 383 aa12.94□□□□□ -0.34
LDHA-211ENST00000494573 DIS3L2Q8IYB7 885 aaKnown RBP12.94□□□□□ -0.34
LDHA-211ENST00000494573 NUP133Q8WUM0 1156 aa12.94□□□□□ -0.34
LDHA-211ENST00000494573 MRFAP1L1Q96HT8 127 aa12.94□□□□□ -0.34
LDHA-211ENST00000494573 NOL10Q9BSC4 688 aaKnown RBP12.94□□□□□ -0.34
LDHA-211ENST00000494573 TRIM5Q9C035 493 aa12.94□□□□□ -0.34
LDHA-211ENST00000494573 DCP1AQ9NPI6 582 aaPredicted RBP12.94□□□□□ -0.34
LDHA-211ENST00000494573 SPTLC3Q9NUV7 552 aa12.94□□□□□ -0.34
LDHA-211ENST00000494573 ROBO3Q96MS0 1386 aa12.94□□□□□ -0.34
LDHA-211ENST00000494573 CYP2D7A0A087X1C5 515 aa12.93□□□□□ -0.34
LDHA-211ENST00000494573 LDHCP07864 332 aa12.93□□□□□ -0.34
LDHA-211ENST00000494573 ATP2B4P23634 1241 aa12.93□□□□□ -0.34
LDHA-211ENST00000494573 PRDX5P30044 214 aa12.93□□□□□ -0.34
LDHA-211ENST00000494573 GUCY1A2P33402 732 aa12.93□□□□□ -0.34
LDHA-211ENST00000494573 SYKP43405 635 aa12.93□□□□□ -0.34
LDHA-211ENST00000494573 AKAP17AQ02040 695 aaKnown RBP12.93□□□□□ -0.34
LDHA-211ENST00000494573 PDE4BQ07343 736 aa12.93□□□□□ -0.34
LDHA-211ENST00000494573 FUT2Q10981 343 aa12.93□□□□□ -0.34
LDHA-211ENST00000494573 ZRSR1Q15695 479 aaKnown RBP12.93□□□□□ -0.34
LDHA-211ENST00000494573 FAM182BQ5T319 152 aa12.93□□□□□ -0.34
LDHA-211ENST00000494573 PRR5LQ6MZQ0 368 aa12.93□□□□□ -0.34
LDHA-211ENST00000494573 DZIP1Q86YF9 867 aaKnown RBP12.93□□□□□ -0.34
LDHA-211ENST00000494573 DHX40Q8IX18 779 aaKnown RBP12.93□□□□□ -0.34
LDHA-211ENST00000494573 SEPT12Q8IYM1 358 aa12.93□□□□□ -0.34
LDHA-211ENST00000494573 CCDC24Q8N4L8 307 aa12.93□□□□□ -0.34
LDHA-211ENST00000494573 TTC12Q9H892 705 aaPredicted RBP12.93□□□□□ -0.34
LDHA-211ENST00000494573 AATFQ9NY61 560 aaKnown RBP eCLIP12.93□□□□□ -0.34
LDHA-211ENST00000494573 CEP131Q9UPN4 1083 aa12.93□□□□□ -0.34
LDHA-211ENST00000494573 BECN2A8MW95 431 aa12.92□□□□□ -0.34
LDHA-211ENST00000494573 BTBD18B2RXH4 712 aa12.92□□□□□ -0.34
LDHA-211ENST00000494573 LDHBP07195 334 aaKnown RBP12.92□□□□□ -0.34
LDHA-211ENST00000494573 MARCKSP29966 332 aaPredicted RBP12.92□□□□□ -0.34
LDHA-211ENST00000494573 PPP4CP60510 307 aa12.92□□□□□ -0.34
LDHA-211ENST00000494573 ST5P78524 1137 aa12.92□□□□□ -0.34
LDHA-211ENST00000494573 CRY2Q49AN0 593 aa12.92□□□□□ -0.34
LDHA-211ENST00000494573 CCDC178Q5BJE1 867 aa12.92□□□□□ -0.34
LDHA-211ENST00000494573 SHC4Q6S5L8 630 aa12.92□□□□□ -0.34
LDHA-211ENST00000494573 TMTC3Q6ZXV5 915 aa12.92□□□□□ -0.34
LDHA-211ENST00000494573 STK11IPQ8N1F8 1099 aa12.92□□□□□ -0.34
LDHA-211ENST00000494573 KRI1Q8N9T8 703 aaKnown RBP12.92□□□□□ -0.34
LDHA-211ENST00000494573 ZNF579Q8NAF0 562 aaKnown RBP12.92□□□□□ -0.34
LDHA-211ENST00000494573 RPGRQ92834 1020 aaKnown RBP12.92□□□□□ -0.34
LDHA-211ENST00000494573 KCNF1Q9H3M0 494 aa12.92□□□□□ -0.34
LDHA-211ENST00000494573 ANKIB1Q9P2G1 1089 aa12.92□□□□□ -0.34
LDHA-211ENST00000494573 TUBE1Q9UJT0 475 aa12.92□□□□□ -0.34
LDHA-211ENST00000494573 SMTNL1A8MU46 457 aa12.91□□□□□ -0.34
LDHA-211ENST00000494573 TOB1P50616 345 aaPredicted RBP12.91□□□□□ -0.34
LDHA-211ENST00000494573 TPM4P67936 248 aa12.91□□□□□ -0.34
LDHA-211ENST00000494573 TROAPQ12815 778 aa12.91□□□□□ -0.34
LDHA-211ENST00000494573 NOLC1Q14978 699 aaKnown RBP eCLIP12.91□□□□□ -0.344e-8■■■□□ 16
LDHA-211ENST00000494573 PKN1Q16512 942 aa12.91□□□□□ -0.34
LDHA-211ENST00000494573 TXNRD3Q86VQ6 643 aa12.91□□□□□ -0.34
LDHA-211ENST00000494573 SPC24Q8NBT2 197 aa12.91□□□□□ -0.34
LDHA-211ENST00000494573 KIAA1524Q8TCG1 905 aa12.91□□□□□ -0.34
LDHA-211ENST00000494573 ANKS1AQ92625 1134 aa12.91□□□□□ -0.34
LDHA-211ENST00000494573 RBM17Q96I25 401 aaKnown RBP12.91□□□□□ -0.34
LDHA-211ENST00000494573 ZNF830Q96NB3 372 aaPredicted RBP12.91□□□□□ -0.34
LDHA-211ENST00000494573 PHF20Q9BVI0 1012 aa12.91□□□□□ -0.34
LDHA-211ENST00000494573 LRRC4BQ9NT99 713 aa12.91□□□□□ -0.34
LDHA-211ENST00000494573 MKRN1Q9UHC7 482 aaKnown RBP12.91□□□□□ -0.34
LDHA-211ENST00000494573 KCNJ14Q9UNX9 436 aa12.91□□□□□ -0.34
LDHA-211ENST00000494573 CNTNAP5Q8WYK1 1306 aa12.9□□□□□ -0.34
LDHA-211ENST00000494573 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms