RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 CTAGE8P0CG41 777 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 HDLBPQ00341 1268 aaKnown RBP4.54□□□□□ -1.68
ATG3-207ENST00000494571 GUCY1A3Q02108 690 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 DEUP1Q05D60 604 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 DMPKQ09013 629 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 CUL4BQ13620 913 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 SPRED3Q2MJR0 410 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 CFAP100Q494V2 611 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 CCDC92Q53HC0 331 aaPredicted RBP4.54□□□□□ -1.68
ATG3-207ENST00000494571 NAA35Q5VZE5 725 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 NUGGCQ68CJ6 796 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 LMBRD2Q68DH5 695 aaPredicted RBP4.54□□□□□ -1.68
ATG3-207ENST00000494571 CTAGE6Q86UF2 777 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 CTAGE4Q8IX94 777 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 SDR16C5Q8N3Y7 309 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 OGFOD1Q8N543 542 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 NECAB1Q8N987 351 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 ATP11CQ8NB49 1132 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 NOA1Q8NC60 698 aaKnown RBP4.54□□□□□ -1.68
ATG3-207ENST00000494571 NEK9Q8TD19 979 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 SMCR8Q8TEV9 937 aaPredicted RBP4.54□□□□□ -1.68
ATG3-207ENST00000494571 USP33Q8TEY7 942 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 ABTB1Q969K4 478 aaPredicted RBP4.54□□□□□ -1.68
ATG3-207ENST00000494571 MKL1Q969V6 931 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 PCMTD2Q9NV79 361 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 HPCAL4Q9UM19 191 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 MTMR6Q9Y217 621 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 TMEM98Q9Y2Y6 226 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 E7EVH7 732 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 SHOX2O60902 331 aaPredicted RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 KRT38O76015 456 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 ATP6V1G2O95670 118 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 LDHAP00338 332 aaKnown RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 SERPINC1P01008 464 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 NBPF7P0C2Y1 421 aaPredicted RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 MYCLP1P12525 358 aaPredicted RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 SESN3P58005 492 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 LARP1BQ659C4 914 aaKnown RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 MTHFD1LQ6UB35 978 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 TOGARAM2Q6ZUX3 1019 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 CCDC80Q76M96 950 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 APBB1IPQ7Z5R6 666 aaPredicted RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 TRIM50Q86XT4 487 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 DHX40Q8IX18 779 aaKnown RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 SIRT2Q8IXJ6 389 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 GALNT15Q8N3T1 639 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 ACSBG1Q96GR2 724 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 SPATA17Q96L03 361 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 SEC62Q99442 399 aaKnown RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 FTOQ9C0B1 505 aaKnown RBP eCLIP4.53□□□□□ -1.68
ATG3-207ENST00000494571 OSBPL5Q9H0X9 879 aaPredicted RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 PPANQ9NQ55 473 aaKnown RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 PPIP5K1Q6PFW1 1433 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 TRAPPC8Q9Y2L5 1435 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 C3P01024 1663 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 EVI5O60447 810 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 LARGE1O95461 756 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 HNRNPCP07910 306 aaKnown RBP eCLIP4.53□□□□□ -1.68
ATG3-207ENST00000494571 VIL1P09327 827 aaKnown RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 CCDC175P0C221 793 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 KIF5BP33176 963 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 AK2P54819 239 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 PSME1Q06323 249 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 TSR1Q2NL82 804 aaKnown RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 ZNF569Q5MCW4 686 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 CEP128Q6ZU80 1094 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 IQCF2Q8IXL9 164 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 CCDC65Q8IXS2 484 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 RASEFQ8IZ41 740 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 ZNF473Q8WTR7 871 aaKnown RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 MAIP1Q8WWC4 291 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 DUSP9Q99956 384 aaKnown RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 MTA3Q9BTC8 594 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 ABCF3Q9NUQ8 709 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 N6AMT1Q9Y5N5 214 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 ABCC3O15438 1527 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 CDK13Q14004 1512 aaKnown RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 PLXNC1O60486 1568 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 A0A0U1RQJ8 604 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 UNCXA6NJT0 531 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 RASSF10A6NK89 507 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 DNM1LO00429 736 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 CEP104O60308 925 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 TUBP50607 506 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 MRPS25P82663 173 aaKnown RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 APBA1Q02410 837 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 MAP3K12Q12852 859 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 CBX3Q13185 183 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 DCTN1Q14203 1278 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 TAF11Q15544 211 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 CCDC57Q2TAC2 916 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 P3H1Q32P28 736 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 NCAPH2Q6IBW4 605 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 WDR75Q8IWA0 830 aaKnown RBP4.53□□□□□ -1.68
ATG3-207ENST00000494571 SLF2Q8IX21 1173 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 ARHGAP18Q8N392 663 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 TEKT1Q969V4 418 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 RUNDC1Q96C34 613 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 EVI5LQ96CN4 794 aa4.53□□□□□ -1.68
ATG3-207ENST00000494571 RBM33Q96EV2 1170 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms