RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 HMGCS2P54868 508 aa16.29■□□□□ 0.2
CTDSP1-212ENST00000494067 UBXN2AP68543 259 aa16.29■□□□□ 0.2
CTDSP1-212ENST00000494067 TTF1Q15361 905 aaPredicted RBP16.29■□□□□ 0.2
CTDSP1-212ENST00000494067 GINM1Q9NU53 330 aa16.29■□□□□ 0.2
CTDSP1-212ENST00000494067 SMARCA5O60264 1052 aaPredicted RBP16.28■□□□□ 0.2
CTDSP1-212ENST00000494067 PEX10O60683 326 aa16.28■□□□□ 0.2
CTDSP1-212ENST00000494067 PDE6AP16499 860 aa16.28■□□□□ 0.2
CTDSP1-212ENST00000494067 PRKCZQ05513 592 aa16.28■□□□□ 0.2
CTDSP1-212ENST00000494067 MTFR1Q15390 333 aa16.28■□□□□ 0.2
CTDSP1-212ENST00000494067 NKX2-3Q8TAU0 364 aa16.28■□□□□ 0.2
CTDSP1-212ENST00000494067 GCC1Q96CN9 775 aa16.28■□□□□ 0.2
CTDSP1-212ENST00000494067 TMOD4Q9NZQ9 345 aa16.28■□□□□ 0.2
CTDSP1-212ENST00000494067 GOLIM4O00461 696 aa16.27■□□□□ 0.2
CTDSP1-212ENST00000494067 TNPO2O14787 897 aaKnown RBP16.27■□□□□ 0.2
CTDSP1-212ENST00000494067 IFIT2P09913 472 aaKnown RBP16.27■□□□□ 0.2
CTDSP1-212ENST00000494067 GCLCP48506 637 aaPredicted RBP16.27■□□□□ 0.2
CTDSP1-212ENST00000494067 PDE3AQ14432 1141 aa16.27■□□□□ 0.2
CTDSP1-212ENST00000494067 SH3D19Q5HYK7 790 aa16.27■□□□□ 0.2
CTDSP1-212ENST00000494067 SLAIN1Q8ND83 568 aa16.27■□□□□ 0.2
CTDSP1-212ENST00000494067 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.27■□□□□ 0.2
CTDSP1-212ENST00000494067 COA7Q96BR5 231 aa16.27■□□□□ 0.2
CTDSP1-212ENST00000494067 DNAJC2Q99543 621 aaKnown RBP16.27■□□□□ 0.2
CTDSP1-212ENST00000494067 DOCK3Q8IZD9 2030 aa16.27■□□□□ 0.2
CTDSP1-212ENST00000494067 ZNF532Q9HCE3 1301 aa16.26■□□□□ 0.19
CTDSP1-212ENST00000494067 BAZ2AQ9UIF9 1905 aaKnown RBP16.26■□□□□ 0.19
CTDSP1-212ENST00000494067 SMIM22K7EJ46 135 aa16.26■□□□□ 0.19
CTDSP1-212ENST00000494067 RAB11FIP3O75154 756 aa16.26■□□□□ 0.19
CTDSP1-212ENST00000494067 PLCD1P51178 756 aa16.26■□□□□ 0.19
CTDSP1-212ENST00000494067 MTMR2Q13614 643 aa16.26■□□□□ 0.19
CTDSP1-212ENST00000494067 POTEEQ6S8J3 1075 aa16.26■□□□□ 0.19
CTDSP1-212ENST00000494067 TTC6Q86TZ1 520 aa16.26■□□□□ 0.19
CTDSP1-212ENST00000494067 ANKRD13CQ8N6S4 541 aa16.26■□□□□ 0.19
CTDSP1-212ENST00000494067 ZBTB21Q9ULJ3 1066 aa16.26■□□□□ 0.19
CTDSP1-212ENST00000494067 PDE4DIPQ5VU43 2346 aa16.26■□□□□ 0.19
CTDSP1-212ENST00000494067 KIAA0100Q14667 2235 aaKnown RBP16.25■□□□□ 0.19
CTDSP1-212ENST00000494067 C19orf81C9J6K1 198 aa16.25■□□□□ 0.19
CTDSP1-212ENST00000494067 SLC9C2Q5TAH2 1124 aa16.25■□□□□ 0.19
CTDSP1-212ENST00000494067 TATDN1Q6P1N9 297 aa16.25■□□□□ 0.19
CTDSP1-212ENST00000494067 LCORLQ8N3X6 602 aa16.25■□□□□ 0.19
CTDSP1-212ENST00000494067 SHISA4Q96DD7 197 aa16.25■□□□□ 0.19
CTDSP1-212ENST00000494067 WDR18Q9BV38 432 aa16.25■□□□□ 0.19
CTDSP1-212ENST00000494067 ASCC2Q9H1I8 757 aaPredicted RBP16.25■□□□□ 0.19
CTDSP1-212ENST00000494067 BOLA2Q9H3K6 86 aa16.25■□□□□ 0.19
CTDSP1-212ENST00000494067 SLC34A2O95436 690 aa16.24■□□□□ 0.19
CTDSP1-212ENST00000494067 SHMT1P34896 483 aa16.24■□□□□ 0.19
CTDSP1-212ENST00000494067 IRX3P78415 501 aaPredicted RBP16.24■□□□□ 0.19
CTDSP1-212ENST00000494067 FAM110CQ1W6H9 321 aa16.24■□□□□ 0.19
CTDSP1-212ENST00000494067 SDR42E1Q8WUS8 393 aa16.24■□□□□ 0.19
CTDSP1-212ENST00000494067 RNF208Q9H0X6 261 aa16.24■□□□□ 0.19
CTDSP1-212ENST00000494067 MAGEB6P1A0A0J9YX57 407 aa16.23■□□□□ 0.19
CTDSP1-212ENST00000494067 USP17L10C9JJH3 530 aa16.23■□□□□ 0.19
CTDSP1-212ENST00000494067 GH2P01242 217 aa16.23■□□□□ 0.19
CTDSP1-212ENST00000494067 CYP2D6P10635 497 aa16.23■□□□□ 0.19
CTDSP1-212ENST00000494067 ATP5JP18859 108 aa16.23■□□□□ 0.19
CTDSP1-212ENST00000494067 GUCY1A2P33402 732 aa16.23■□□□□ 0.19
CTDSP1-212ENST00000494067 FLT3LGP49771 235 aa16.23■□□□□ 0.19
CTDSP1-212ENST00000494067 BACE1P56817 501 aa16.23■□□□□ 0.19
CTDSP1-212ENST00000494067 GABPAQ06546 454 aa16.23■□□□□ 0.19
CTDSP1-212ENST00000494067 EMILIN3Q9NT22 766 aa16.23■□□□□ 0.19
CTDSP1-212ENST00000494067 PAG1Q9NWQ8 432 aa16.23■□□□□ 0.19
CTDSP1-212ENST00000494067 SERPINB13Q9UIV8 391 aa16.23■□□□□ 0.19
CTDSP1-212ENST00000494067 TAOK2Q9UL54 1235 aa16.23■□□□□ 0.19
CTDSP1-212ENST00000494067 MYH8P13535 1937 aa16.22■□□□□ 0.19
CTDSP1-212ENST00000494067 PRKAB2O43741 272 aa16.22■□□□□ 0.19
CTDSP1-212ENST00000494067 ADCY3O60266 1144 aa16.22■□□□□ 0.19
CTDSP1-212ENST00000494067 CCL5P13501 91 aa16.22■□□□□ 0.19
CTDSP1-212ENST00000494067 ADD2P35612 726 aa16.22■□□□□ 0.19
CTDSP1-212ENST00000494067 IRF5Q13568 498 aa16.22■□□□□ 0.19
CTDSP1-212ENST00000494067 TSHZ3Q63HK5 1081 aa16.22■□□□□ 0.19
CTDSP1-212ENST00000494067 PXYLP1Q8TE99 480 aa16.22■□□□□ 0.19
CTDSP1-212ENST00000494067 HAUS7Q99871 368 aa16.22■□□□□ 0.19
CTDSP1-212ENST00000494067 CRNKL1Q9BZJ0 848 aaKnown RBP16.22■□□□□ 0.19
CTDSP1-212ENST00000494067 EHD4Q9H223 541 aa16.22■□□□□ 0.19
CTDSP1-212ENST00000494067 ARMT1Q9H993 441 aa16.22■□□□□ 0.19
CTDSP1-212ENST00000494067 TXNRD2Q9NNW7 524 aa16.22■□□□□ 0.19
CTDSP1-212ENST00000494067 CABP5Q9NP86 173 aa16.22■□□□□ 0.19
CTDSP1-212ENST00000494067 POLR3DP05423 398 aaPredicted RBP16.21■□□□□ 0.19
CTDSP1-212ENST00000494067 GJB1P08034 283 aa16.21■□□□□ 0.19
CTDSP1-212ENST00000494067 ELNP15502 786 aa16.21■□□□□ 0.19
CTDSP1-212ENST00000494067 CAPN2P17655 700 aa16.21■□□□□ 0.19
CTDSP1-212ENST00000494067 CCAR1Q8IX12 1150 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-212ENST00000494067 SLC44A5Q8NCS7 719 aa16.21■□□□□ 0.19
CTDSP1-212ENST00000494067 ACER1Q8TDN7 264 aa16.21■□□□□ 0.19
CTDSP1-212ENST00000494067 P2RX7Q99572 595 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-212ENST00000494067 LRRCC1Q9C099 1032 aa16.21■□□□□ 0.19
CTDSP1-212ENST00000494067 DCP1AQ9NPI6 582 aaPredicted RBP16.21■□□□□ 0.19
CTDSP1-212ENST00000494067 PCDHB15Q9Y5E8 787 aa16.21■□□□□ 0.19
CTDSP1-212ENST00000494067 HOXA7P31268 230 aaPredicted RBP16.2■□□□□ 0.18
CTDSP1-212ENST00000494067 GJA8P48165 433 aa16.2■□□□□ 0.18
CTDSP1-212ENST00000494067 CERKLQ49MI3 558 aaPredicted RBP16.2■□□□□ 0.18
CTDSP1-212ENST00000494067 USP17L2Q6R6M4 530 aa16.2■□□□□ 0.18
CTDSP1-212ENST00000494067 GTF3C2Q8WUA4 911 aaPredicted RBP16.2■□□□□ 0.18
CTDSP1-212ENST00000494067 FEZ1Q99689 392 aa16.2■□□□□ 0.18
CTDSP1-212ENST00000494067 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.2■□□□□ 0.18
CTDSP1-212ENST00000494067 RLFQ13129 1914 aa16.19■□□□□ 0.18
CTDSP1-212ENST00000494067 CYP2D7A0A087X1C5 515 aa16.19■□□□□ 0.18
CTDSP1-212ENST00000494067 MBD4O95243 580 aa16.19■□□□□ 0.18
CTDSP1-212ENST00000494067 USP14P54578 494 aa16.19■□□□□ 0.18
CTDSP1-212ENST00000494067 ZYXQ15942 572 aaKnown RBP16.19■□□□□ 0.18
CTDSP1-212ENST00000494067 HTATIP2Q9BUP3 242 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms