RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 TFAP4Q01664 338 aa9.43□□□□□ -0.9
FDPS-218ENST00000492887 COL9A3Q14050 684 aaPredicted RBP9.43□□□□□ -0.9
FDPS-218ENST00000492887 ME3Q16798 604 aa9.43□□□□□ -0.9
FDPS-218ENST00000492887 IFIT1BQ5T764 474 aaKnown RBP9.43□□□□□ -0.9
FDPS-218ENST00000492887 MICU3Q86XE3 530 aa9.43□□□□□ -0.9
FDPS-218ENST00000492887 SLC44A5Q8NCS7 719 aa9.43□□□□□ -0.9
FDPS-218ENST00000492887 NUP133Q8WUM0 1156 aa9.43□□□□□ -0.9
FDPS-218ENST00000492887 GMLQ99445 158 aa9.43□□□□□ -0.9
FDPS-218ENST00000492887 IDI2Q9BXS1 227 aa9.43□□□□□ -0.9
FDPS-218ENST00000492887 ALDH8A1Q9H2A2 487 aaPredicted RBP9.43□□□□□ -0.9
FDPS-218ENST00000492887 ZSWIM5Q9P217 1185 aa9.43□□□□□ -0.9
FDPS-218ENST00000492887 SWAP70Q9UH65 585 aa9.43□□□□□ -0.9
FDPS-218ENST00000492887 SERPINB13Q9UIV8 391 aa9.43□□□□□ -0.9
FDPS-218ENST00000492887 MTMR7Q9Y216 660 aa9.43□□□□□ -0.9
FDPS-218ENST00000492887 CPLX1O14810 134 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 ZBTB43O43298 467 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 ENTPD3O75355 529 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 RXRAP19793 462 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 CDK8P49336 464 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 MMP14P50281 582 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 METAP2P50579 478 aaKnown RBP eCLIP9.42□□□□□ -0.9
FDPS-218ENST00000492887 EXOSC10Q01780 885 aaKnown RBP9.42□□□□□ -0.9
FDPS-218ENST00000492887 TNFAIP1Q13829 316 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 CCDC178Q5BJE1 867 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 DPY19L2Q6NUT2 758 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 CPLX2Q6PUV4 134 aaKnown RBP9.42□□□□□ -0.9
FDPS-218ENST00000492887 C16orf86Q6ZW13 317 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 SAMD7Q7Z3H4 446 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 CCDC144CPQ8IYA2 1237 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 GPC2Q8N158 579 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 FAM184AQ8NB25 1140 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 CHMP4CQ96CF2 233 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 CSRNP1Q96S65 589 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 DHX36Q9H2U1 1008 aaKnown RBP9.42□□□□□ -0.9
FDPS-218ENST00000492887 GPHNQ9NQX3 736 aaPredicted RBP9.42□□□□□ -0.9
FDPS-218ENST00000492887 CHMP5Q9NZZ3 219 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 MKRN1Q9UHC7 482 aaKnown RBP9.42□□□□□ -0.9
FDPS-218ENST00000492887 ISY1Q9ULR0 285 aaKnown RBP9.42□□□□□ -0.9
FDPS-218ENST00000492887 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.42□□□□□ -0.9
FDPS-218ENST00000492887 SLC12A7Q9Y666 1083 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 TACC3Q9Y6A5 838 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 OTOFQ9HC10 1997 aa9.42□□□□□ -0.9
FDPS-218ENST00000492887 COL2A1P02458 1487 aaPredicted RBP9.41□□□□□ -0.9
FDPS-218ENST00000492887 FAM196BA6NMK8 535 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 WNT10BO00744 389 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 DDNO94850 711 aaPredicted RBP9.41□□□□□ -0.9
FDPS-218ENST00000492887 GJB2P29033 226 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 NT5C2P49902 561 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 FOSBP53539 338 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 ATP2B2Q01814 1243 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 CUL4AQ13619 759 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 NBPF9Q3BBW0 867 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 CHADLQ6NUI6 762 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 CATIPQ7Z7H3 387 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 TMTC2Q8N394 836 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 MTMR14Q8NCE2 650 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 DPF2Q92785 391 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 GTF3C6Q969F1 213 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 ZSCAN10Q96SZ4 725 aaPredicted RBP9.41□□□□□ -0.9
FDPS-218ENST00000492887 MYL10Q9BUA6 226 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 KAT14Q9H8E8 782 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 LY9Q9HBG7 655 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 CWC22Q9HCG8 908 aaKnown RBP9.41□□□□□ -0.9
FDPS-218ENST00000492887 PI4KBQ9UBF8 816 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 FAM198AQ9UFP1 575 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 STX8Q9UNK0 236 aa9.41□□□□□ -0.9
FDPS-218ENST00000492887 WDR90Q96KV7 1748 aa9.4□□□□□ -0.9
FDPS-218ENST00000492887 DDTLA6NHG4 134 aaPredicted RBP9.4□□□□□ -0.9
FDPS-218ENST00000492887 RAD21O60216 631 aa9.4□□□□□ -0.9
FDPS-218ENST00000492887 PFKFB2O60825 505 aa9.4□□□□□ -0.9
FDPS-218ENST00000492887 RASA1P20936 1047 aa9.4□□□□□ -0.9
FDPS-218ENST00000492887 SCRN1Q12765 414 aa9.4□□□□□ -0.9
FDPS-218ENST00000492887 RTN1Q16799 776 aa9.4□□□□□ -0.9
FDPS-218ENST00000492887 APOBEC3FQ8IUX4 373 aaKnown RBP9.4□□□□□ -0.9
FDPS-218ENST00000492887 ZFPM1Q8IX07 1006 aa9.4□□□□□ -0.9
FDPS-218ENST00000492887 ZNF654Q8IZM8 581 aa9.4□□□□□ -0.9
FDPS-218ENST00000492887 TRPM4Q8TD43 1214 aa9.4□□□□□ -0.9
FDPS-218ENST00000492887 FAM151AQ8WW52 585 aa9.4□□□□□ -0.9
FDPS-218ENST00000492887 DDX11Q96FC9 970 aa9.4□□□□□ -0.9
FDPS-218ENST00000492887 ZNF274Q96GC6 653 aaPredicted RBP9.4□□□□□ -0.9
FDPS-218ENST00000492887 INTS4Q96HW7 963 aaKnown RBP9.4□□□□□ -0.9
FDPS-218ENST00000492887 MTA3Q9BTC8 594 aa9.4□□□□□ -0.9
FDPS-218ENST00000492887 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.4□□□□□ -0.9
FDPS-218ENST00000492887 NCOA5Q9HCD5 579 aaKnown RBP9.4□□□□□ -0.9
FDPS-218ENST00000492887 GPRC5DQ9NZD1 345 aa9.4□□□□□ -0.9
FDPS-218ENST00000492887 HACL1Q9UJ83 578 aa9.4□□□□□ -0.9
FDPS-218ENST00000492887 SCAF8Q9UPN6 1271 aaKnown RBP9.4□□□□□ -0.9
FDPS-218ENST00000492887 KIF3AQ9Y496 699 aa9.4□□□□□ -0.9
FDPS-218ENST00000492887 TRPM7Q96QT4 1865 aa9.4□□□□□ -0.91
FDPS-218ENST00000492887 VPS37CA5D8V6 355 aaPredicted RBP9.39□□□□□ -0.91
FDPS-218ENST00000492887 DHX16O60231 1041 aaKnown RBP9.39□□□□□ -0.91
FDPS-218ENST00000492887 NMT2O60551 498 aa9.39□□□□□ -0.91
FDPS-218ENST00000492887 DTNBO60941 627 aa9.39□□□□□ -0.91
FDPS-218ENST00000492887 CDKL5O76039 1030 aa9.39□□□□□ -0.91
FDPS-218ENST00000492887 GDF11O95390 407 aa9.39□□□□□ -0.91
FDPS-218ENST00000492887 AKR1B1P15121 316 aa9.39□□□□□ -0.91
FDPS-218ENST00000492887 PDIA3P30101 505 aaKnown RBP9.39□□□□□ -0.91
FDPS-218ENST00000492887 LIFRP42702 1097 aa9.39□□□□□ -0.91
FDPS-218ENST00000492887 ZNF280AP59817 542 aaPredicted RBP9.39□□□□□ -0.91
FDPS-218ENST00000492887 NUCB2P80303 420 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms