RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 DNAJC2Q99543 621 aaKnown RBP20.98■□□□□ 0.95
SGMS1-204ENST00000492601 WDR18Q9BV38 432 aa20.98■□□□□ 0.95
SGMS1-204ENST00000492601 BAZ2AQ9UIF9 1905 aaKnown RBP20.98■□□□□ 0.95
SGMS1-204ENST00000492601 GOLIM4O00461 696 aa20.97■□□□□ 0.95
SGMS1-204ENST00000492601 TNPO2O14787 897 aaKnown RBP20.97■□□□□ 0.95
SGMS1-204ENST00000492601 PABPC4Q13310 644 aaKnown RBP eCLIP20.97■□□□□ 0.95
SGMS1-204ENST00000492601 TTF1Q15361 905 aaPredicted RBP20.97■□□□□ 0.95
SGMS1-204ENST00000492601 SH3D19Q5HYK7 790 aa20.97■□□□□ 0.95
SGMS1-204ENST00000492601 CERS3Q8IU89 383 aa20.97■□□□□ 0.95
SGMS1-204ENST00000492601 ASCC2Q9H1I8 757 aaPredicted RBP20.97■□□□□ 0.95
SGMS1-204ENST00000492601 CHMP4BQ9H444 224 aaKnown RBP20.97■□□□□ 0.95
SGMS1-204ENST00000492601 ZBTB21Q9ULJ3 1066 aa20.97■□□□□ 0.95
SGMS1-204ENST00000492601 RAB11FIP3O75154 756 aa20.96■□□□□ 0.95
SGMS1-204ENST00000492601 PDE6AP16499 860 aa20.96■□□□□ 0.95
SGMS1-204ENST00000492601 FLT3LGP49771 235 aa20.96■□□□□ 0.95
SGMS1-204ENST00000492601 BACE1P56817 501 aa20.96■□□□□ 0.95
SGMS1-204ENST00000492601 SLC9C2Q5TAH2 1124 aa20.96■□□□□ 0.95
SGMS1-204ENST00000492601 TMOD4Q9NZQ9 345 aa20.96■□□□□ 0.95
SGMS1-204ENST00000492601 MAGEB6P1A0A0J9YX57 407 aa20.95■□□□□ 0.94
SGMS1-204ENST00000492601 ADCY3O60266 1144 aa20.95■□□□□ 0.94
SGMS1-204ENST00000492601 FAM110CQ1W6H9 321 aa20.95■□□□□ 0.94
SGMS1-204ENST00000492601 EDC3Q96F86 508 aaKnown RBP20.95■□□□□ 0.94
SGMS1-204ENST00000492601 RIOK1Q9BRS2 568 aaKnown RBP20.95■□□□□ 0.94
SGMS1-204ENST00000492601 PLXNB2O15031 1838 aa20.94■□□□□ 0.94
SGMS1-204ENST00000492601 USP17L10C9JJH3 530 aa20.94■□□□□ 0.94
SGMS1-204ENST00000492601 GH2P01242 217 aa20.94■□□□□ 0.94
SGMS1-204ENST00000492601 CCL5P13501 91 aa20.94■□□□□ 0.94
SGMS1-204ENST00000492601 ELNP15502 786 aa20.94■□□□□ 0.94
SGMS1-204ENST00000492601 GCLCP48506 637 aaPredicted RBP20.94■□□□□ 0.94
SGMS1-204ENST00000492601 TMED8Q6PL24 325 aaPredicted RBP20.94■□□□□ 0.94
SGMS1-204ENST00000492601 SLAIN1Q8ND83 568 aa20.94■□□□□ 0.94
SGMS1-204ENST00000492601 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.94■□□□□ 0.94
SGMS1-204ENST00000492601 GINM1Q9NU53 330 aa20.94■□□□□ 0.94
SGMS1-204ENST00000492601 SERPINB13Q9UIV8 391 aa20.94■□□□□ 0.94
SGMS1-204ENST00000492601 TAOK2Q9UL54 1235 aa20.94■□□□□ 0.94
SGMS1-204ENST00000492601 SLC34A2O95436 690 aa20.93■□□□□ 0.94
SGMS1-204ENST00000492601 UBXN2AP68543 259 aa20.93■□□□□ 0.94
SGMS1-204ENST00000492601 IRX3P78415 501 aaPredicted RBP20.93■□□□□ 0.94
SGMS1-204ENST00000492601 PDE3AQ14432 1141 aa20.93■□□□□ 0.94
SGMS1-204ENST00000492601 COA7Q96BR5 231 aa20.93■□□□□ 0.94
SGMS1-204ENST00000492601 RNF208Q9H0X6 261 aa20.93■□□□□ 0.94
SGMS1-204ENST00000492601 ZNF532Q9HCE3 1301 aa20.93■□□□□ 0.94
SGMS1-204ENST00000492601 C19orf81C9J6K1 198 aa20.92■□□□□ 0.94
SGMS1-204ENST00000492601 TATDN1Q6P1N9 297 aa20.92■□□□□ 0.94
SGMS1-204ENST00000492601 TTC6Q86TZ1 520 aa20.92■□□□□ 0.94
SGMS1-204ENST00000492601 SHISA4Q96DD7 197 aa20.92■□□□□ 0.94
SGMS1-204ENST00000492601 EHD4Q9H223 541 aa20.92■□□□□ 0.94
SGMS1-204ENST00000492601 BOLA2Q9H3K6 86 aa20.92■□□□□ 0.94
SGMS1-204ENST00000492601 PEX10O60683 326 aa20.91■□□□□ 0.94
SGMS1-204ENST00000492601 POLR3DP05423 398 aaPredicted RBP20.91■□□□□ 0.94
SGMS1-204ENST00000492601 PLCD1P51178 756 aa20.91■□□□□ 0.94
SGMS1-204ENST00000492601 P2RX7Q99572 595 aaKnown RBP20.91■□□□□ 0.94
SGMS1-204ENST00000492601 CRNKL1Q9BZJ0 848 aaKnown RBP20.91■□□□□ 0.94
SGMS1-204ENST00000492601 UNC93B1Q9H1C4 597 aa20.91■□□□□ 0.94
SGMS1-204ENST00000492601 PAG1Q9NWQ8 432 aa20.91■□□□□ 0.94
SGMS1-204ENST00000492601 TCRBV5S4A2TA0A5A2 114 aa20.9■□□□□ 0.94
SGMS1-204ENST00000492601 SMARCA5O60264 1052 aaPredicted RBP20.9■□□□□ 0.94
SGMS1-204ENST00000492601 INHAP05111 366 aa20.9■□□□□ 0.94
SGMS1-204ENST00000492601 HOXA7P31268 230 aaPredicted RBP20.9■□□□□ 0.94
SGMS1-204ENST00000492601 EVX2Q03828 476 aa20.9■□□□□ 0.94
SGMS1-204ENST00000492601 RAB3GAP1Q15042 981 aa20.9■□□□□ 0.94
SGMS1-204ENST00000492601 ZYXQ15942 572 aaKnown RBP20.9■□□□□ 0.94
SGMS1-204ENST00000492601 SLFNL1Q499Z3 407 aa20.9■□□□□ 0.94
SGMS1-204ENST00000492601 CERKLQ49MI3 558 aaPredicted RBP20.9■□□□□ 0.94
SGMS1-204ENST00000492601 LCORLQ8N3X6 602 aa20.9■□□□□ 0.94
SGMS1-204ENST00000492601 EMILIN3Q9NT22 766 aa20.9■□□□□ 0.94
SGMS1-204ENST00000492601 GJB1P08034 283 aa20.89■□□□□ 0.93
SGMS1-204ENST00000492601 ATP5JP18859 108 aa20.89■□□□□ 0.93
SGMS1-204ENST00000492601 SHMT1P34896 483 aa20.89■□□□□ 0.93
SGMS1-204ENST00000492601 IRF5Q13568 498 aa20.89■□□□□ 0.93
SGMS1-204ENST00000492601 ABCB5Q2M3G0 1257 aa20.89■□□□□ 0.93
SGMS1-204ENST00000492601 USP17L2Q6R6M4 530 aa20.89■□□□□ 0.93
SGMS1-204ENST00000492601 NKX2-3Q8TAU0 364 aa20.89■□□□□ 0.93
SGMS1-204ENST00000492601 PXYLP1Q8TE99 480 aa20.89■□□□□ 0.93
SGMS1-204ENST00000492601 SDR42E1Q8WUS8 393 aa20.89■□□□□ 0.93
SGMS1-204ENST00000492601 FEZ1Q99689 392 aa20.89■□□□□ 0.93
SGMS1-204ENST00000492601 LRRCC1Q9C099 1032 aa20.89■□□□□ 0.93
SGMS1-204ENST00000492601 MCM9Q9NXL9 1143 aa20.89■□□□□ 0.93
SGMS1-204ENST00000492601 GJA8P48165 433 aa20.88■□□□□ 0.93
SGMS1-204ENST00000492601 HERVK_113P62684 666 aa20.88■□□□□ 0.93
SGMS1-204ENST00000492601 ARMT1Q9H993 441 aa20.88■□□□□ 0.93
SGMS1-204ENST00000492601 MORF4L1Q9UBU8 362 aa20.88■□□□□ 0.93
SGMS1-204ENST00000492601 HAUS7Q99871 368 aa20.87■□□□□ 0.93
SGMS1-204ENST00000492601 TXNRD2Q9NNW7 524 aa20.87■□□□□ 0.93
SGMS1-204ENST00000492601 CABP5Q9NP86 173 aa20.87■□□□□ 0.93
SGMS1-204ENST00000492601 MBD4O95243 580 aa20.86■□□□□ 0.93
SGMS1-204ENST00000492601 CHGBP05060 677 aa20.86■□□□□ 0.93
SGMS1-204ENST00000492601 CYP2D6P10635 497 aa20.86■□□□□ 0.93
SGMS1-204ENST00000492601 ADD2P35612 726 aa20.86■□□□□ 0.93
SGMS1-204ENST00000492601 ACER1Q8TDN7 264 aa20.86■□□□□ 0.93
SGMS1-204ENST00000492601 U2AF1L4Q8WU68 220 aaKnown RBP20.86■□□□□ 0.93
SGMS1-204ENST00000492601 DCP1AQ9NPI6 582 aaPredicted RBP20.86■□□□□ 0.93
SGMS1-204ENST00000492601 PRKAB2O43741 272 aa20.85■□□□□ 0.93
SGMS1-204ENST00000492601 GABPAQ06546 454 aa20.85■□□□□ 0.93
SGMS1-204ENST00000492601 GPRC5AQ8NFJ5 357 aa20.85■□□□□ 0.93
SGMS1-204ENST00000492601 PAGR1Q9BTK6 254 aa20.85■□□□□ 0.93
SGMS1-204ENST00000492601 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.85■□□□□ 0.93
SGMS1-204ENST00000492601 RBPJLQ9UBG7 517 aa20.85■□□□□ 0.93
SGMS1-204ENST00000492601 GJD2Q9UKL4 321 aa20.85■□□□□ 0.93
SGMS1-204ENST00000492601 MPHOSPH10O00566 681 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms