RNA–Protein interactions for RNA: ENST00000492582.5

CHKB-212, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-212ENST00000492582 FAM237AA0A1B0GTK4 181 aa33.29■■■□□ 2.92
CHKB-212ENST00000492582 CYP2D6P10635 497 aa33.29■■■□□ 2.92
CHKB-212ENST00000492582 FUT2Q10981 343 aa33.29■■■□□ 2.92
CHKB-212ENST00000492582 TROAPQ12815 778 aa33.29■■■□□ 2.92
CHKB-212ENST00000492582 ARHGAP30Q7Z6I6 1101 aaPredicted RBP33.29■■■□□ 2.92
CHKB-212ENST00000492582 CEP57L1Q8IYX8 460 aa33.29■■■□□ 2.92
CHKB-212ENST00000492582 RBM28Q9NW13 759 aaKnown RBP33.29■■■□□ 2.92
CHKB-212ENST00000492582 LDHBP07195 334 aaKnown RBP33.28■■■□□ 2.92
CHKB-212ENST00000492582 SLC3A2P08195 630 aaKnown RBP33.28■■■□□ 2.92
CHKB-212ENST00000492582 CALM1P0DP23 149 aa33.28■■■□□ 2.92
CHKB-212ENST00000492582 CALM2P0DP24 149 aa33.28■■■□□ 2.92
CHKB-212ENST00000492582 CALM3P0DP25 149 aa33.28■■■□□ 2.92
CHKB-212ENST00000492582 ZNF804AQ7Z570 1209 aa33.28■■■□□ 2.92
CHKB-212ENST00000492582 DHX40Q8IX18 779 aaKnown RBP33.28■■■□□ 2.92
CHKB-212ENST00000492582 PIBF1Q8WXW3 757 aa33.28■■■□□ 2.92
CHKB-212ENST00000492582 TIGD1Q96MW7 591 aa33.28■■■□□ 2.92
CHKB-212ENST00000492582 CUTAO60888 179 aa33.27■■■□□ 2.92
CHKB-212ENST00000492582 DDAH1O94760 285 aa33.27■■■□□ 2.92
CHKB-212ENST00000492582 TOB1P50616 345 aaPredicted RBP33.27■■■□□ 2.92
CHKB-212ENST00000492582 SLC27A3Q5K4L6 730 aa33.27■■■□□ 2.92
CHKB-212ENST00000492582 SARM1Q6SZW1 724 aa33.27■■■□□ 2.92
CHKB-212ENST00000492582 SERPINB2P05120 415 aa33.27■■■□□ 2.92
CHKB-212ENST00000492582 ST5P78524 1137 aa33.27■■■□□ 2.92
CHKB-212ENST00000492582 GPSM2P81274 684 aa33.27■■■□□ 2.92
CHKB-212ENST00000492582 RESP18Q5W5W9 173 aa33.27■■■□□ 2.92
CHKB-212ENST00000492582 KCNF1Q9H3M0 494 aa33.27■■■□□ 2.92
CHKB-212ENST00000492582 SYKP43405 635 aa33.26■■■□□ 2.92
CHKB-212ENST00000492582 AKAP17AQ02040 695 aaKnown RBP33.26■■■□□ 2.92
CHKB-212ENST00000492582 MYH6P13533 1939 aa33.26■■■□□ 2.91
CHKB-212ENST00000492582 PKN1Q16512 942 aa33.25■■■□□ 2.91
CHKB-212ENST00000492582 GPR101Q96P66 508 aaPredicted RBP33.25■■■□□ 2.91
CHKB-212ENST00000492582 PRPF3O43395 683 aaKnown RBP33.25■■■□□ 2.91
CHKB-212ENST00000492582 PLEKHA8P1O95397 391 aa33.25■■■□□ 2.91
CHKB-212ENST00000492582 NR5A1Q13285 461 aa33.25■■■□□ 2.91
CHKB-212ENST00000492582 RILPL1Q5EBL4 403 aa33.25■■■□□ 2.91
CHKB-212ENST00000492582 CLIC6Q96NY7 704 aa33.25■■■□□ 2.91
CHKB-212ENST00000492582 NAT10Q9H0A0 1025 aaKnown RBP33.25■■■□□ 2.91
CHKB-212ENST00000492582 BECN2A8MW95 431 aa33.24■■■□□ 2.91
CHKB-212ENST00000492582 PDE4BQ07343 736 aa33.24■■■□□ 2.91
CHKB-212ENST00000492582 FAM47AQ5JRC9 791 aa33.24■■■□□ 2.91
CHKB-212ENST00000492582 SHISA4Q96DD7 197 aa33.24■■■□□ 2.91
CHKB-212ENST00000492582 MCM9Q9NXL9 1143 aa33.24■■■□□ 2.91
CHKB-212ENST00000492582 MKRN1Q9UHC7 482 aaKnown RBP33.24■■■□□ 2.91
CHKB-212ENST00000492582 OXER1Q8TDS5 423 aa33.23■■■□□ 2.91
CHKB-212ENST00000492582 NMT2O60551 498 aa33.22■■■□□ 2.91
CHKB-212ENST00000492582 USP17L8P0C7I0 530 aa33.22■■■□□ 2.91
CHKB-212ENST00000492582 CDC25BP30305 580 aa33.22■■■□□ 2.91
CHKB-212ENST00000492582 GSTO1P78417 241 aa33.22■■■□□ 2.91
CHKB-212ENST00000492582 GRIK5Q16478 980 aa33.22■■■□□ 2.91
CHKB-212ENST00000492582 KRI1Q8N9T8 703 aaKnown RBP33.22■■■□□ 2.91
CHKB-212ENST00000492582 RBM17Q96I25 401 aaKnown RBP33.22■■■□□ 2.91
CHKB-212ENST00000492582 XBP1P17861 261 aa33.22■■■□□ 2.91
CHKB-212ENST00000492582 RBM6P78332 1123 aaKnown RBP33.22■■■□□ 2.91
CHKB-212ENST00000492582 TMTC3Q6ZXV5 915 aa33.22■■■□□ 2.91
CHKB-212ENST00000492582 ZRSR1Q15695 479 aaKnown RBP33.21■■■□□ 2.91
CHKB-212ENST00000492582 DPCR1Q3MIW9 517 aa33.21■■■□□ 2.91
CHKB-212ENST00000492582 AOPEPQ8N6M6 819 aa33.21■■■□□ 2.91
CHKB-212ENST00000492582 FBXW7Q969H0 707 aa33.21■■■□□ 2.91
CHKB-212ENST00000492582 UFL1O94874 794 aa33.21■■■□□ 2.91
CHKB-212ENST00000492582 PTGS1P23219 599 aa33.21■■■□□ 2.91
CHKB-212ENST00000492582 ATP2B4P23634 1241 aa33.21■■■□□ 2.91
CHKB-212ENST00000492582 C12orf60Q5U649 245 aa33.21■■■□□ 2.91
CHKB-212ENST00000492582 SH3RF3Q8TEJ3 882 aaPredicted RBP33.21■■■□□ 2.91
CHKB-212ENST00000492582 VPS54Q9P1Q0 977 aa33.21■■■□□ 2.91
CHKB-212ENST00000492582 RGS17Q9UGC6 210 aaPredicted RBP33.21■■■□□ 2.91
CHKB-212ENST00000492582 USP5P45974 858 aa33.2■■■□□ 2.91
CHKB-212ENST00000492582 NLRP12P59046 1061 aa33.2■■■□□ 2.91
CHKB-212ENST00000492582 DRC7Q8IY82 874 aa33.2■■■□□ 2.91
CHKB-212ENST00000492582 BPIFA3Q9BQP9 254 aa33.2■■■□□ 2.91
CHKB-212ENST00000492582 PHF20Q9BVI0 1012 aa33.2■■■□□ 2.91
CHKB-212ENST00000492582 V9GY48 417 aaPredicted RBP33.2■■■□□ 2.91
CHKB-212ENST00000492582 TSPY2A6NKD2 308 aa33.19■■■□□ 2.9
CHKB-212ENST00000492582 NOLC1Q14978 699 aaKnown RBP eCLIP33.19■■■□□ 2.9
CHKB-212ENST00000492582 DIXDC1Q155Q3 683 aa33.19■■■□□ 2.9
CHKB-212ENST00000492582 CNTNAP5Q8WYK1 1306 aa33.19■■■□□ 2.9
CHKB-212ENST00000492582 PPP4CP60510 307 aa33.19■■■□□ 2.9
CHKB-212ENST00000492582 CD209Q9NNX6 404 aa33.19■■■□□ 2.9
CHKB-212ENST00000492582 PCDHB6Q9Y5E3 794 aa33.19■■■□□ 2.9
CHKB-212ENST00000492582 CCDC186Q7Z3E2 898 aa33.18■■■□□ 2.9
CHKB-212ENST00000492582 CTCFLQ8NI51 663 aaPredicted RBP33.18■■■□□ 2.9
CHKB-212ENST00000492582 GGA1Q9UJY5 639 aa33.18■■■□□ 2.9
CHKB-212ENST00000492582 FBXO2Q9UK22 296 aaPredicted RBP33.18■■■□□ 2.9
CHKB-212ENST00000492582 ROBO3Q96MS0 1386 aa33.18■■■□□ 2.9
CHKB-212ENST00000492582 hCG_1642624A0A1W2PR95 340 aa33.17■■■□□ 2.9
CHKB-212ENST00000492582 BAG3O95817 575 aa33.17■■■□□ 2.9
CHKB-212ENST00000492582 PTPREP23469 700 aa33.17■■■□□ 2.9
CHKB-212ENST00000492582 DDR1Q08345 913 aa33.17■■■□□ 2.9
CHKB-212ENST00000492582 MRFAP1L1Q96HT8 127 aa33.17■■■□□ 2.9
CHKB-212ENST00000492582 CLIP2Q9UDT6 1046 aa33.17■■■□□ 2.9
CHKB-212ENST00000492582 TRIM37O94972 964 aa33.17■■■□□ 2.9
CHKB-212ENST00000492582 KRT27Q7Z3Y8 459 aa33.17■■■□□ 2.9
CHKB-212ENST00000492582 CABP5Q9NP86 173 aa33.17■■■□□ 2.9
CHKB-212ENST00000492582 TUBE1Q9UJT0 475 aa33.17■■■□□ 2.9
CHKB-212ENST00000492582 KCNH3Q9ULD8 1083 aa33.17■■■□□ 2.9
CHKB-212ENST00000492582 PYCARDQ9ULZ3 195 aa33.17■■■□□ 2.9
CHKB-212ENST00000492582 R3HCC1Q9Y3T6 440 aaKnown RBP33.17■■■□□ 2.9
CHKB-212ENST00000492582 BIN1O00499 593 aa33.16■■■□□ 2.9
CHKB-212ENST00000492582 LDHCP07864 332 aa33.16■■■□□ 2.9
CHKB-212ENST00000492582 KRT2P35908 639 aa33.16■■■□□ 2.9
CHKB-212ENST00000492582 NT5C2P49902 561 aa33.16■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms