RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 KIF1BPQ96EK5 621 aa10.08□□□□□ -0.8
APP-216ENST00000491395 RIOK1Q9BRS2 568 aaKnown RBP10.08□□□□□ -0.8
APP-216ENST00000491395 EMILIN3Q9NT22 766 aa10.08□□□□□ -0.8
APP-216ENST00000491395 GINM1Q9NU53 330 aa10.08□□□□□ -0.8
APP-216ENST00000491395 TMOD4Q9NZQ9 345 aa10.08□□□□□ -0.8
APP-216ENST00000491395 RCAN3Q9UKA8 241 aa10.08□□□□□ -0.8
APP-216ENST00000491395 DDX19BQ9UMR2 479 aa10.08□□□□□ -0.8
APP-216ENST00000491395 DOCK2Q92608 1830 aa10.07□□□□□ -0.8
APP-216ENST00000491395 CEP290O15078 2479 aa10.07□□□□□ -0.8
APP-216ENST00000491395 MAGEB6P1A0A0J9YX57 407 aa10.07□□□□□ -0.8
APP-216ENST00000491395 C19orf81C9J6K1 198 aa10.07□□□□□ -0.8
APP-216ENST00000491395 USP17L10C9JJH3 530 aa10.07□□□□□ -0.8
APP-216ENST00000491395 GOLIM4O00461 696 aa10.07□□□□□ -0.8
APP-216ENST00000491395 HMMRO75330 724 aa10.07□□□□□ -0.8
APP-216ENST00000491395 INHAP05111 366 aa10.07□□□□□ -0.8
APP-216ENST00000491395 IFIT2P09913 472 aaKnown RBP10.07□□□□□ -0.8
APP-216ENST00000491395 PDE6AP16499 860 aa10.07□□□□□ -0.8
APP-216ENST00000491395 HOXA7P31268 230 aaPredicted RBP10.07□□□□□ -0.8
APP-216ENST00000491395 IRX3P78415 501 aaPredicted RBP10.07□□□□□ -0.8
APP-216ENST00000491395 HABP4Q5JVS0 413 aaKnown RBP10.07□□□□□ -0.8
APP-216ENST00000491395 SLC9C2Q5TAH2 1124 aa10.07□□□□□ -0.8
APP-216ENST00000491395 C20orf194Q5TEA3 1177 aa10.07□□□□□ -0.8
APP-216ENST00000491395 CERS3Q8IU89 383 aa10.07□□□□□ -0.8
APP-216ENST00000491395 PXYLP1Q8TE99 480 aa10.07□□□□□ -0.8
APP-216ENST00000491395 U2AF1L4Q8WU68 220 aaKnown RBP10.07□□□□□ -0.8
APP-216ENST00000491395 GCC1Q96CN9 775 aa10.07□□□□□ -0.8
APP-216ENST00000491395 EDC3Q96F86 508 aaKnown RBP10.07□□□□□ -0.8
APP-216ENST00000491395 DNAJC2Q99543 621 aaKnown RBP10.07□□□□□ -0.8
APP-216ENST00000491395 GJD2Q9UKL4 321 aa10.07□□□□□ -0.8
APP-216ENST00000491395 H0YGN5 161 aa10.06□□□□□ -0.8
APP-216ENST00000491395 RAB11FIP3O75154 756 aa10.06□□□□□ -0.8
APP-216ENST00000491395 SGPL1O95470 568 aa10.06□□□□□ -0.8
APP-216ENST00000491395 POLR3DP05423 398 aaPredicted RBP10.06□□□□□ -0.8
APP-216ENST00000491395 PLCD1P51178 756 aa10.06□□□□□ -0.8
APP-216ENST00000491395 HERVK_113P62684 666 aa10.06□□□□□ -0.8
APP-216ENST00000491395 EVX2Q03828 476 aa10.06□□□□□ -0.8
APP-216ENST00000491395 TTF1Q15361 905 aaPredicted RBP10.06□□□□□ -0.8
APP-216ENST00000491395 TMED8Q6PL24 325 aaPredicted RBP10.06□□□□□ -0.8
APP-216ENST00000491395 UBE2Q1Q7Z7E8 422 aa10.06□□□□□ -0.8
APP-216ENST00000491395 TTC6Q86TZ1 520 aa10.06□□□□□ -0.8
APP-216ENST00000491395 ACER1Q8TDN7 264 aa10.06□□□□□ -0.8
APP-216ENST00000491395 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.06□□□□□ -0.8
APP-216ENST00000491395 DPF3Q92784 378 aa10.06□□□□□ -0.8
APP-216ENST00000491395 DEFB118Q96PH6 123 aa10.06□□□□□ -0.8
APP-216ENST00000491395 EHD4Q9H223 541 aa10.06□□□□□ -0.8
APP-216ENST00000491395 TXNRD2Q9NNW7 524 aa10.06□□□□□ -0.8
APP-216ENST00000491395 RBPJLQ9UBG7 517 aa10.06□□□□□ -0.8
APP-216ENST00000491395 MORF4L1Q9UBU8 362 aa10.06□□□□□ -0.8
APP-216ENST00000491395 SERPINB13Q9UIV8 391 aa10.06□□□□□ -0.8
APP-216ENST00000491395 ZNF532Q9HCE3 1301 aa10.06□□□□□ -0.8
APP-216ENST00000491395 DOCK1Q14185 1865 aa10.05□□□□□ -0.8
APP-216ENST00000491395 TCRBV5S4A2TA0A5A2 114 aa10.05□□□□□ -0.8
APP-216ENST00000491395 TFRCP02786 760 aaKnown RBP10.05□□□□□ -0.8
APP-216ENST00000491395 CYP2D6P10635 497 aa10.05□□□□□ -0.8
APP-216ENST00000491395 SHMT1P34896 483 aa10.05□□□□□ -0.8
APP-216ENST00000491395 TRIM32Q13049 653 aa10.05□□□□□ -0.8
APP-216ENST00000491395 RAB3GAP1Q15042 981 aa10.05□□□□□ -0.8
APP-216ENST00000491395 ZYXQ15942 572 aaKnown RBP10.05□□□□□ -0.8
APP-216ENST00000491395 ABCB5Q2M3G0 1257 aa10.05□□□□□ -0.8
APP-216ENST00000491395 Q3C1V9 767 aa10.05□□□□□ -0.8
APP-216ENST00000491395 SLFNL1Q499Z3 407 aa10.05□□□□□ -0.8
APP-216ENST00000491395 CERKLQ49MI3 558 aaPredicted RBP10.05□□□□□ -0.8
APP-216ENST00000491395 USP17L2Q6R6M4 530 aa10.05□□□□□ -0.8
APP-216ENST00000491395 POTEEQ6S8J3 1075 aa10.05□□□□□ -0.8
APP-216ENST00000491395 GPRC5AQ8NFJ5 357 aa10.05□□□□□ -0.8
APP-216ENST00000491395 CRNKL1Q9BZJ0 848 aaKnown RBP10.05□□□□□ -0.8
APP-216ENST00000491395 BOLA2Q9H3K6 86 aa10.05□□□□□ -0.8
APP-216ENST00000491395 RTN4Q9NQC3 1192 aaKnown RBP10.05□□□□□ -0.8
APP-216ENST00000491395 COLQQ9Y215 455 aaPredicted RBP10.05□□□□□ -0.8
APP-216ENST00000491395 CENPFP49454 3210 aa10.05□□□□□ -0.8
APP-216ENST00000491395 PRKAB2O43741 272 aa10.04□□□□□ -0.8
APP-216ENST00000491395 SMARCA5O60264 1052 aaPredicted RBP10.04□□□□□ -0.8
APP-216ENST00000491395 FARP2O94887 1054 aaPredicted RBP10.04□□□□□ -0.8
APP-216ENST00000491395 ATP5JP18859 108 aa10.04□□□□□ -0.8
APP-216ENST00000491395 CYP2B6P20813 491 aa10.04□□□□□ -0.8
APP-216ENST00000491395 LCORLQ8N3X6 602 aa10.04□□□□□ -0.8
APP-216ENST00000491395 SDR42E1Q8WUS8 393 aa10.04□□□□□ -0.8
APP-216ENST00000491395 FEZ1Q99689 392 aa10.04□□□□□ -0.8
APP-216ENST00000491395 PAGR1Q9BTK6 254 aa10.04□□□□□ -0.8
APP-216ENST00000491395 CHMP4BQ9H444 224 aaKnown RBP10.04□□□□□ -0.8
APP-216ENST00000491395 ARMT1Q9H993 441 aa10.04□□□□□ -0.8
APP-216ENST00000491395 PAK6Q9NQU5 681 aaPredicted RBP10.04□□□□□ -0.8
APP-216ENST00000491395 MCM9Q9NXL9 1143 aa10.04□□□□□ -0.8
APP-216ENST00000491395 PHIPQ8WWQ0 1821 aa10.04□□□□□ -0.8
APP-216ENST00000491395 USP17L15C9J2P7 530 aa10.03□□□□□ -0.8
APP-216ENST00000491395 USP17L13C9JLJ4 530 aa10.03□□□□□ -0.8
APP-216ENST00000491395 USP17L11C9JVI0 530 aa10.03□□□□□ -0.8
APP-216ENST00000491395 USP17L18D6R9N7 530 aa10.03□□□□□ -0.8
APP-216ENST00000491395 USP17L22D6RA61 530 aa10.03□□□□□ -0.8
APP-216ENST00000491395 USP17L17D6RBQ6 530 aa10.03□□□□□ -0.8
APP-216ENST00000491395 USP17L19D6RCP7 530 aa10.03□□□□□ -0.8
APP-216ENST00000491395 USP17L20D6RJB6 530 aa10.03□□□□□ -0.8
APP-216ENST00000491395 HMGCRP04035 888 aa10.03□□□□□ -0.8
APP-216ENST00000491395 CHGBP05060 677 aa10.03□□□□□ -0.8
APP-216ENST00000491395 GUCY1A2P33402 732 aa10.03□□□□□ -0.8
APP-216ENST00000491395 GABPAQ06546 454 aa10.03□□□□□ -0.8
APP-216ENST00000491395 USP17L24Q0WX57 530 aa10.03□□□□□ -0.8
APP-216ENST00000491395 PDE3AQ14432 1141 aa10.03□□□□□ -0.8
APP-216ENST00000491395 SEPT2Q15019 361 aa10.03□□□□□ -0.8
APP-216ENST00000491395 C12orf42Q96LP6 360 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms