RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 COA7Q96BR5 231 aa25.52■■□□□ 1.68
SYNE4-205ENST00000490730 WDR18Q9BV38 432 aa25.52■■□□□ 1.68
SYNE4-205ENST00000490730 ASCC2Q9H1I8 757 aaPredicted RBP25.52■■□□□ 1.68
SYNE4-205ENST00000490730 SH3D19Q5HYK7 790 aa25.51■■□□□ 1.67
SYNE4-205ENST00000490730 METTL16Q86W50 562 aaKnown RBP25.51■■□□□ 1.67
SYNE4-205ENST00000490730 RPAP2Q8IXW5 612 aaPredicted RBP25.51■■□□□ 1.67
SYNE4-205ENST00000490730 GCC1Q96CN9 775 aa25.51■■□□□ 1.67
SYNE4-205ENST00000490730 ZBTB21Q9ULJ3 1066 aa25.51■■□□□ 1.67
SYNE4-205ENST00000490730 IFIT2P09913 472 aaKnown RBP25.5■■□□□ 1.67
SYNE4-205ENST00000490730 GCLCP48506 637 aaPredicted RBP25.5■■□□□ 1.67
SYNE4-205ENST00000490730 BACE1P56817 501 aa25.5■■□□□ 1.67
SYNE4-205ENST00000490730 IRX3P78415 501 aaPredicted RBP25.5■■□□□ 1.67
SYNE4-205ENST00000490730 NKX2-3Q8TAU0 364 aa25.5■■□□□ 1.67
SYNE4-205ENST00000490730 SHISA4Q96DD7 197 aa25.5■■□□□ 1.67
SYNE4-205ENST00000490730 KIF1BPQ96EK5 621 aa25.5■■□□□ 1.67
SYNE4-205ENST00000490730 RCAN3Q9UKA8 241 aa25.5■■□□□ 1.67
SYNE4-205ENST00000490730 TTF1Q15361 905 aaPredicted RBP25.49■■□□□ 1.67
SYNE4-205ENST00000490730 DNAJC2Q99543 621 aaKnown RBP25.49■■□□□ 1.67
SYNE4-205ENST00000490730 UNC93B1Q9H1C4 597 aa25.49■■□□□ 1.67
SYNE4-205ENST00000490730 ZBTB40Q9NUA8 1239 aa25.49■■□□□ 1.67
SYNE4-205ENST00000490730 USP17L10C9JJH3 530 aa25.48■■□□□ 1.67
SYNE4-205ENST00000490730 INHAP05111 366 aa25.48■■□□□ 1.67
SYNE4-205ENST00000490730 GINM1Q9NU53 330 aa25.48■■□□□ 1.67
SYNE4-205ENST00000490730 DOCK3Q8IZD9 2030 aa25.47■■□□□ 1.67
SYNE4-205ENST00000490730 MAGEB6P1A0A0J9YX57 407 aa25.47■■□□□ 1.67
SYNE4-205ENST00000490730 GH2P01242 217 aa25.47■■□□□ 1.67
SYNE4-205ENST00000490730 GJB1P08034 283 aa25.47■■□□□ 1.67
SYNE4-205ENST00000490730 SIRT2Q8IXJ6 389 aa25.47■■□□□ 1.67
SYNE4-205ENST00000490730 NAV1Q8NEY1 1877 aa25.47■■□□□ 1.67
SYNE4-205ENST00000490730 C19orf81C9J6K1 198 aa25.46■■□□□ 1.67
SYNE4-205ENST00000490730 GOLIM4O00461 696 aa25.46■■□□□ 1.67
SYNE4-205ENST00000490730 GJA8P48165 433 aa25.46■■□□□ 1.67
SYNE4-205ENST00000490730 IRF5Q13568 498 aa25.46■■□□□ 1.67
SYNE4-205ENST00000490730 SLC9C2Q5TAH2 1124 aa25.46■■□□□ 1.67
SYNE4-205ENST00000490730 TMED8Q6PL24 325 aaPredicted RBP25.46■■□□□ 1.67
SYNE4-205ENST00000490730 PXYLP1Q8TE99 480 aa25.46■■□□□ 1.67
SYNE4-205ENST00000490730 CHMP4BQ9H444 224 aaKnown RBP25.46■■□□□ 1.67
SYNE4-205ENST00000490730 SERPINB13Q9UIV8 391 aa25.46■■□□□ 1.67
SYNE4-205ENST00000490730 PDE6AP16499 860 aa25.45■■□□□ 1.66
SYNE4-205ENST00000490730 TTC6Q86TZ1 520 aa25.45■■□□□ 1.66
SYNE4-205ENST00000490730 FEZ1Q99689 392 aa25.45■■□□□ 1.66
SYNE4-205ENST00000490730 RAB11FIP3O75154 756 aa25.44■■□□□ 1.66
SYNE4-205ENST00000490730 ZYXQ15942 572 aaKnown RBP25.44■■□□□ 1.66
SYNE4-205ENST00000490730 U2AF1L4Q8WU68 220 aaKnown RBP25.44■■□□□ 1.66
SYNE4-205ENST00000490730 P2RX7Q99572 595 aaKnown RBP25.44■■□□□ 1.66
SYNE4-205ENST00000490730 RIOK1Q9BRS2 568 aaKnown RBP25.44■■□□□ 1.66
SYNE4-205ENST00000490730 ZNF532Q9HCE3 1301 aa25.43■■□□□ 1.66
SYNE4-205ENST00000490730 POLR3DP05423 398 aaPredicted RBP25.43■■□□□ 1.66
SYNE4-205ENST00000490730 HERVK_113P62684 666 aa25.43■■□□□ 1.66
SYNE4-205ENST00000490730 RAB3GAP1Q15042 981 aa25.43■■□□□ 1.66
SYNE4-205ENST00000490730 DPF3Q92784 378 aa25.43■■□□□ 1.66
SYNE4-205ENST00000490730 CRNKL1Q9BZJ0 848 aaKnown RBP25.43■■□□□ 1.66
SYNE4-205ENST00000490730 EHD4Q9H223 541 aa25.43■■□□□ 1.66
SYNE4-205ENST00000490730 DDX60LQ5H9U9 1706 aaKnown RBP25.43■■□□□ 1.66
SYNE4-205ENST00000490730 PEX10O60683 326 aa25.42■■□□□ 1.66
SYNE4-205ENST00000490730 HOXA7P31268 230 aaPredicted RBP25.42■■□□□ 1.66
SYNE4-205ENST00000490730 CERKLQ49MI3 558 aaPredicted RBP25.42■■□□□ 1.66
SYNE4-205ENST00000490730 TATDN1Q6P1N9 297 aa25.42■■□□□ 1.66
SYNE4-205ENST00000490730 USP17L2Q6R6M4 530 aa25.42■■□□□ 1.66
SYNE4-205ENST00000490730 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.42■■□□□ 1.66
SYNE4-205ENST00000490730 EDC3Q96F86 508 aaKnown RBP25.42■■□□□ 1.66
SYNE4-205ENST00000490730 MORF4L1Q9UBU8 362 aa25.42■■□□□ 1.66
SYNE4-205ENST00000490730 CEP290O15078 2479 aa25.42■■□□□ 1.66
SYNE4-205ENST00000490730 PLCD1P51178 756 aa25.41■■□□□ 1.66
SYNE4-205ENST00000490730 ABCB5Q2M3G0 1257 aa25.41■■□□□ 1.66
SYNE4-205ENST00000490730 HABP4Q5JVS0 413 aaKnown RBP25.41■■□□□ 1.66
SYNE4-205ENST00000490730 C20orf194Q5TEA3 1177 aa25.41■■□□□ 1.66
SYNE4-205ENST00000490730 DEFB118Q96PH6 123 aa25.41■■□□□ 1.66
SYNE4-205ENST00000490730 EMILIN3Q9NT22 766 aa25.41■■□□□ 1.66
SYNE4-205ENST00000490730 H0YGN5 161 aa25.4■■□□□ 1.66
SYNE4-205ENST00000490730 FARP2O94887 1054 aaPredicted RBP25.4■■□□□ 1.66
SYNE4-205ENST00000490730 SGPL1O95470 568 aa25.4■■□□□ 1.66
SYNE4-205ENST00000490730 TFRCP02786 760 aaKnown RBP25.4■■□□□ 1.66
SYNE4-205ENST00000490730 GPRC5AQ8NFJ5 357 aa25.4■■□□□ 1.66
SYNE4-205ENST00000490730 PAGR1Q9BTK6 254 aa25.4■■□□□ 1.66
SYNE4-205ENST00000490730 BOLA2Q9H3K6 86 aa25.4■■□□□ 1.66
SYNE4-205ENST00000490730 CABP5Q9NP86 173 aa25.4■■□□□ 1.66
SYNE4-205ENST00000490730 MCM9Q9NXL9 1143 aa25.4■■□□□ 1.66
SYNE4-205ENST00000490730 CCAR1Q8IX12 1150 aaKnown RBP25.39■■□□□ 1.66
SYNE4-205ENST00000490730 TXNRD2Q9NNW7 524 aa25.39■■□□□ 1.66
SYNE4-205ENST00000490730 PAG1Q9NWQ8 432 aa25.39■■□□□ 1.66
SYNE4-205ENST00000490730 SHMT1P34896 483 aa25.38■■□□□ 1.65
SYNE4-205ENST00000490730 LCORLQ8N3X6 602 aa25.38■■□□□ 1.65
SYNE4-205ENST00000490730 SDR42E1Q8WUS8 393 aa25.38■■□□□ 1.65
SYNE4-205ENST00000490730 PLXNB2O15031 1838 aa25.37■■□□□ 1.65
SYNE4-205ENST00000490730 TCRBV5S4A2TA0A5A2 114 aa25.37■■□□□ 1.65
SYNE4-205ENST00000490730 HMGCRP04035 888 aa25.37■■□□□ 1.65
SYNE4-205ENST00000490730 HTATIP2Q9BUP3 242 aa25.37■■□□□ 1.65
SYNE4-205ENST00000490730 ARMT1Q9H993 441 aa25.37■■□□□ 1.65
SYNE4-205ENST00000490730 GJD2Q9UKL4 321 aa25.37■■□□□ 1.65
SYNE4-205ENST00000490730 MPHOSPH10O00566 681 aaKnown RBP25.36■■□□□ 1.65
SYNE4-205ENST00000490730 CYP2B6P20813 491 aa25.36■■□□□ 1.65
SYNE4-205ENST00000490730 USP14P54578 494 aa25.36■■□□□ 1.65
SYNE4-205ENST00000490730 UBE2Q1Q7Z7E8 422 aa25.36■■□□□ 1.65
SYNE4-205ENST00000490730 ACER1Q8TDN7 264 aa25.36■■□□□ 1.65
SYNE4-205ENST00000490730 GTF3C2Q8WUA4 911 aaPredicted RBP25.36■■□□□ 1.65
SYNE4-205ENST00000490730 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.36■■□□□ 1.65
SYNE4-205ENST00000490730 CWC22Q9HCG8 908 aaKnown RBP25.36■■□□□ 1.65
SYNE4-205ENST00000490730 PAK6Q9NQU5 681 aaPredicted RBP25.36■■□□□ 1.65
SYNE4-205ENST00000490730 RBPJLQ9UBG7 517 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms