RNA–Protein interactions for RNA: ENST00000490544.1

C9orf43-203, Transcript of chromosome 9 open reading frame 43, humanhuman

TSL 3

Gene C9orf43, Length 547 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-203ENST00000490544 CA12O43570 354 aa18.55■□□□□ 0.56
C9orf43-203ENST00000490544 GSPT1P15170 499 aaKnown RBP18.55■□□□□ 0.56
C9orf43-203ENST00000490544 SDSP20132 328 aa18.55■□□□□ 0.56
C9orf43-203ENST00000490544 TM4SF4P48230 202 aa18.55■□□□□ 0.56
C9orf43-203ENST00000490544 SHROOM1Q2M3G4 852 aaPredicted RBP18.55■□□□□ 0.56
C9orf43-203ENST00000490544 IFNL1Q8IU54 200 aa18.55■□□□□ 0.56
C9orf43-203ENST00000490544 SLC44A5Q8NCS7 719 aa18.55■□□□□ 0.56
C9orf43-203ENST00000490544 HELLSQ9NRZ9 838 aa18.55■□□□□ 0.56
C9orf43-203ENST00000490544 CASP8AP2Q9UKL3 1982 aa18.54■□□□□ 0.56
C9orf43-203ENST00000490544 MPHOSPH10O00566 681 aaKnown RBP18.54■□□□□ 0.56
C9orf43-203ENST00000490544 CETPP11597 493 aa18.54■□□□□ 0.56
C9orf43-203ENST00000490544 INHBEP58166 350 aa18.54■□□□□ 0.56
C9orf43-203ENST00000490544 CERKLQ49MI3 558 aaPredicted RBP18.54■□□□□ 0.56
C9orf43-203ENST00000490544 MCMDC2Q4G0Z9 681 aa18.54■□□□□ 0.56
C9orf43-203ENST00000490544 OTUD7BQ6GQQ9 843 aa18.54■□□□□ 0.56
C9orf43-203ENST00000490544 CTR9Q6PD62 1173 aa18.54■□□□□ 0.56
C9orf43-203ENST00000490544 CWC27Q6UX04 472 aaKnown RBP18.54■□□□□ 0.56
C9orf43-203ENST00000490544 METTL16Q86W50 562 aaKnown RBP18.54■□□□□ 0.56
C9orf43-203ENST00000490544 BRI3BPQ8WY22 251 aa18.54■□□□□ 0.56
C9orf43-203ENST00000490544 NAPBQ9H115 298 aa18.54■□□□□ 0.56
C9orf43-203ENST00000490544 EPB41L4AQ9HCS5 686 aaPredicted RBP18.54■□□□□ 0.56
C9orf43-203ENST00000490544 LOC285556D6RIA3 1793 aa18.53■□□□□ 0.56
C9orf43-203ENST00000490544 PATL2C9JE40 543 aaKnown RBP18.53■□□□□ 0.56
C9orf43-203ENST00000490544 SMIM22K7EJ46 135 aa18.53■□□□□ 0.56
C9orf43-203ENST00000490544 HIP1O00291 1037 aa18.53■□□□□ 0.56
C9orf43-203ENST00000490544 IGF2BP3O00425 579 aaKnown RBP eCLIP18.53■□□□□ 0.56
C9orf43-203ENST00000490544 GH2P01242 217 aa18.53■□□□□ 0.56
C9orf43-203ENST00000490544 ASNSP08243 561 aa18.53■□□□□ 0.56
C9orf43-203ENST00000490544 SHMT1P34896 483 aa18.53■□□□□ 0.56
C9orf43-203ENST00000490544 C12orf60Q5U649 245 aa18.53■□□□□ 0.56
C9orf43-203ENST00000490544 MS4A4AQ96JQ5 239 aa18.53■□□□□ 0.56
C9orf43-203ENST00000490544 SAGE1Q9NXZ1 904 aa18.53■□□□□ 0.56
C9orf43-203ENST00000490544 ZBTB21Q9ULJ3 1066 aa18.53■□□□□ 0.56
C9orf43-203ENST00000490544 USP17L5A8MUK1 530 aa18.52■□□□□ 0.56
C9orf43-203ENST00000490544 TBC1D8O95759 1140 aa18.52■□□□□ 0.56
C9orf43-203ENST00000490544 JAG1P78504 1218 aa18.52■□□□□ 0.56
C9orf43-203ENST00000490544 RAB3GAP1Q15042 981 aa18.52■□□□□ 0.56
C9orf43-203ENST00000490544 ABCB5Q2M3G0 1257 aa18.52■□□□□ 0.56
C9orf43-203ENST00000490544 GIMAP6Q6P9H5 292 aa18.52■□□□□ 0.56
C9orf43-203ENST00000490544 GADL1Q6ZQY3 521 aa18.52■□□□□ 0.56
C9orf43-203ENST00000490544 IFNL3Q8IZI9 196 aa18.52■□□□□ 0.56
C9orf43-203ENST00000490544 MCOLN1Q9GZU1 580 aa18.52■□□□□ 0.56
C9orf43-203ENST00000490544 AS3MTQ9HBK9 375 aa18.52■□□□□ 0.56
C9orf43-203ENST00000490544 SWAP70Q9UH65 585 aa18.52■□□□□ 0.56
C9orf43-203ENST00000490544 CCDC171Q6TFL3 1326 aa18.51■□□□□ 0.55
C9orf43-203ENST00000490544 LAMA4Q16363 1823 aa18.51■□□□□ 0.55
C9orf43-203ENST00000490544 ALDH1A1P00352 501 aa18.51■□□□□ 0.55
C9orf43-203ENST00000490544 GABPAQ06546 454 aa18.51■□□□□ 0.55
C9orf43-203ENST00000490544 VPS53Q5VIR6 699 aa18.51■□□□□ 0.55
C9orf43-203ENST00000490544 TATDN1Q6P1N9 297 aa18.51■□□□□ 0.55
C9orf43-203ENST00000490544 ZNF589Q86UQ0 364 aaPredicted RBP18.51■□□□□ 0.55
C9orf43-203ENST00000490544 PTPN18Q99952 460 aa18.51■□□□□ 0.55
C9orf43-203ENST00000490544 CABP5Q9NP86 173 aa18.51■□□□□ 0.55
C9orf43-203ENST00000490544 PPP4R2Q9NY27 417 aa18.51■□□□□ 0.55
C9orf43-203ENST00000490544 KCNH4Q9UQ05 1017 aa18.51■□□□□ 0.55
C9orf43-203ENST00000490544 AFG3L2Q9Y4W6 797 aa18.51■□□□□ 0.55
C9orf43-203ENST00000490544 MFAP1P55081 439 aaKnown RBP18.5■□□□□ 0.55
C9orf43-203ENST00000490544 SPP2Q13103 211 aa18.5■□□□□ 0.55
C9orf43-203ENST00000490544 TICAM2Q86XR7 235 aa18.5■□□□□ 0.55
C9orf43-203ENST00000490544 FAM43AQ8N2R8 423 aa18.5■□□□□ 0.55
C9orf43-203ENST00000490544 ZNF280CQ8ND82 737 aa18.5■□□□□ 0.55
C9orf43-203ENST00000490544 TESPA1A2RU30 521 aaPredicted RBP18.49■□□□□ 0.55
C9orf43-203ENST00000490544 BTBD19C9JJ37 291 aa18.49■□□□□ 0.55
C9orf43-203ENST00000490544 CXCL11O14625 94 aa18.49■□□□□ 0.55
C9orf43-203ENST00000490544 CDK8P49336 464 aa18.49■□□□□ 0.55
C9orf43-203ENST00000490544 MTMR2Q13614 643 aa18.49■□□□□ 0.55
C9orf43-203ENST00000490544 TAF1CQ15572 869 aaPredicted RBP18.49■□□□□ 0.55
C9orf43-203ENST00000490544 SBK1Q52WX2 424 aa18.49■□□□□ 0.55
C9orf43-203ENST00000490544 C16orf86Q6ZW13 317 aa18.49■□□□□ 0.55
C9orf43-203ENST00000490544 FEZ1Q99689 392 aa18.49■□□□□ 0.55
C9orf43-203ENST00000490544 TBC1D2Q9BYX2 928 aa18.49■□□□□ 0.55
C9orf43-203ENST00000490544 MKNK2Q9HBH9 465 aa18.49■□□□□ 0.55
C9orf43-203ENST00000490544 MYH4Q9Y623 1939 aa18.49■□□□□ 0.55
C9orf43-203ENST00000490544 A0A0G2JLL6 359 aaPredicted RBP18.48■□□□□ 0.55
C9orf43-203ENST00000490544 HMGCS2P54868 508 aa18.48■□□□□ 0.55
C9orf43-203ENST00000490544 ZYXQ15942 572 aaKnown RBP18.48■□□□□ 0.55
C9orf43-203ENST00000490544 PRRT2Q7Z6L0 340 aaPredicted RBP18.48■□□□□ 0.55
C9orf43-203ENST00000490544 GINM1Q9NU53 330 aa18.48■□□□□ 0.55
C9orf43-203ENST00000490544 ROBO3Q96MS0 1386 aa18.47■□□□□ 0.55
C9orf43-203ENST00000490544 PDHXO00330 501 aa18.47■□□□□ 0.55
C9orf43-203ENST00000490544 FOXP2O15409 715 aa18.47■□□□□ 0.55
C9orf43-203ENST00000490544 SLC3A2P08195 630 aaKnown RBP18.47■□□□□ 0.55
C9orf43-203ENST00000490544 AKR1B1P15121 316 aa18.47■□□□□ 0.55
C9orf43-203ENST00000490544 PPARAQ07869 468 aa18.47■□□□□ 0.55
C9orf43-203ENST00000490544 CRHR2Q13324 411 aa18.47■□□□□ 0.55
C9orf43-203ENST00000490544 DGKZQ13574 1117 aa18.47■□□□□ 0.55
C9orf43-203ENST00000490544 SEPT2Q15019 361 aa18.47■□□□□ 0.55
C9orf43-203ENST00000490544 ERICH6BQ5W0A0 696 aa18.47■□□□□ 0.55
C9orf43-203ENST00000490544 FASTKD5Q7L8L6 764 aaKnown RBP18.47■□□□□ 0.55
C9orf43-203ENST00000490544 PRDM1O75626 825 aa18.46■□□□□ 0.55
C9orf43-203ENST00000490544 HSPD1P10809 573 aaKnown RBP18.46■□□□□ 0.55
C9orf43-203ENST00000490544 CTDSPL2Q05D32 466 aa18.46■□□□□ 0.55
C9orf43-203ENST00000490544 R3HDMLQ9H3Y0 253 aa18.46■□□□□ 0.55
C9orf43-203ENST00000490544 TMOD4Q9NZQ9 345 aa18.46■□□□□ 0.55
C9orf43-203ENST00000490544 GREB1LQ9C091 1923 aaPredicted RBP18.45■□□□□ 0.54
C9orf43-203ENST00000490544 PDE4BQ07343 736 aa18.45■□□□□ 0.54
C9orf43-203ENST00000490544 TMEM179Q6ZVK1 233 aa18.45■□□□□ 0.54
C9orf43-203ENST00000490544 ANKRD23Q86SG2 305 aa18.45■□□□□ 0.54
C9orf43-203ENST00000490544 CLEC10AQ8IUN9 316 aa18.45■□□□□ 0.54
C9orf43-203ENST00000490544 RUFY2Q8WXA3 655 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms