RNA–Protein interactions for RNA: ENST00000490127.5

RBM3-209, Transcript of RNA binding motif protein 3, human

TSL 5

Gene RBM3, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM3-209	ENST00000490127	PAWR	Q96IZ0	340 aa	Known RBP	13.75	□□□□□ -0.21
RBM3-209	ENST00000490127	CRISPLD2	Q9H0B8	497 aa		13.75	□□□□□ -0.21
RBM3-209	ENST00000490127	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.75	□□□□□ -0.21	6e-12	■□□□□ 10.4
RBM3-209	ENST00000490127	PIH1D3	Q9NQM4	214 aa	Known RBP	13.75	□□□□□ -0.21
RBM3-209	ENST00000490127	PHIP	Q8WWQ0	1821 aa		13.75	□□□□□ -0.21
RBM3-209	ENST00000490127	COL2A1	P02458	1487 aa	Predicted RBP	13.74	□□□□□ -0.21
RBM3-209	ENST00000490127		A0A1W2PPC1	479 aa		13.74	□□□□□ -0.21
RBM3-209	ENST00000490127	HMGCR	P04035	888 aa		13.74	□□□□□ -0.21
RBM3-209	ENST00000490127	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.74	□□□□□ -0.21
RBM3-209	ENST00000490127	STAP2	Q9UGK3	403 aa		13.74	□□□□□ -0.21
RBM3-209	ENST00000490127	HERC5	Q9UII4	1024 aa	Known RBP	13.74	□□□□□ -0.21
RBM3-209	ENST00000490127	BAG3	O95817	575 aa		13.73	□□□□□ -0.21
RBM3-209	ENST00000490127	RRP1B	Q14684	758 aa	Known RBP	13.73	□□□□□ -0.21
RBM3-209	ENST00000490127	SH3D19	Q5HYK7	790 aa		13.73	□□□□□ -0.21
RBM3-209	ENST00000490127	ANKLE1	Q8NAG6	615 aa		13.73	□□□□□ -0.21
RBM3-209	ENST00000490127	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.73	□□□□□ -0.21
RBM3-209	ENST00000490127	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
RBM3-209	ENST00000490127	LRRCC1	Q9C099	1032 aa		13.73	□□□□□ -0.21
RBM3-209	ENST00000490127	DHX36	Q9H2U1	1008 aa	Known RBP	13.73	□□□□□ -0.21
RBM3-209	ENST00000490127	HMX1	Q9NP08	348 aa	Predicted RBP	13.73	□□□□□ -0.21
RBM3-209	ENST00000490127	TMOD4	Q9NZQ9	345 aa		13.73	□□□□□ -0.21
RBM3-209	ENST00000490127	PI4KB	Q9UBF8	816 aa		13.73	□□□□□ -0.21
RBM3-209	ENST00000490127	GJD2	Q9UKL4	321 aa		13.73	□□□□□ -0.21
RBM3-209	ENST00000490127	NDUFB9	Q9Y6M9	179 aa		13.73	□□□□□ -0.21
RBM3-209	ENST00000490127	RPTOR	Q8N122	1335 aa		13.72	□□□□□ -0.21
RBM3-209	ENST00000490127	IDH1	O75874	414 aa	Known RBP	13.72	□□□□□ -0.21
RBM3-209	ENST00000490127	PLCG2	P16885	1265 aa		13.72	□□□□□ -0.21
RBM3-209	ENST00000490127	IRX3	P78415	501 aa	Predicted RBP	13.72	□□□□□ -0.21
RBM3-209	ENST00000490127	ADGRA1	Q86SQ6	560 aa		13.72	□□□□□ -0.21
RBM3-209	ENST00000490127	DIS3L	Q8TF46	1054 aa	Known RBP	13.72	□□□□□ -0.21
RBM3-209	ENST00000490127	WDR18	Q9BV38	432 aa		13.72	□□□□□ -0.21
RBM3-209	ENST00000490127	TRIM34	Q9BYJ4	488 aa		13.72	□□□□□ -0.21
RBM3-209	ENST00000490127	BCL11A	Q9H165	835 aa		13.72	□□□□□ -0.21
RBM3-209	ENST00000490127	ANTXR1	Q9H6X2	564 aa		13.72	□□□□□ -0.21
RBM3-209	ENST00000490127	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
RBM3-209	ENST00000490127	ASNS	P08243	561 aa		13.71	□□□□□ -0.21
RBM3-209	ENST00000490127	CYP7A1	P22680	504 aa		13.71	□□□□□ -0.21
RBM3-209	ENST00000490127	MAP3K12	Q12852	859 aa		13.71	□□□□□ -0.21
RBM3-209	ENST00000490127	TTF1	Q15361	905 aa	Predicted RBP	13.71	□□□□□ -0.21
RBM3-209	ENST00000490127	TMED8	Q6PL24	325 aa	Predicted RBP	13.71	□□□□□ -0.21
RBM3-209	ENST00000490127	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.71	□□□□□ -0.21
RBM3-209	ENST00000490127	CRBN	Q96SW2	442 aa		13.71	□□□□□ -0.21
RBM3-209	ENST00000490127	NBPF3	Q9H094	633 aa		13.71	□□□□□ -0.21
RBM3-209	ENST00000490127	MORF4L1	Q9UBU8	362 aa		13.71	□□□□□ -0.21
RBM3-209	ENST00000490127	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.7	□□□□□ -0.22
RBM3-209	ENST00000490127	C19orf81	C9J6K1	198 aa		13.7	□□□□□ -0.22
RBM3-209	ENST00000490127	CYP2B6	P20813	491 aa		13.7	□□□□□ -0.22
RBM3-209	ENST00000490127	HOXA7	P31268	230 aa	Predicted RBP	13.7	□□□□□ -0.22
RBM3-209	ENST00000490127	BACE1	P56817	501 aa		13.7	□□□□□ -0.22
RBM3-209	ENST00000490127	PPP4C	P60510	307 aa		13.7	□□□□□ -0.22
RBM3-209	ENST00000490127	TRIM32	Q13049	653 aa		13.7	□□□□□ -0.22
RBM3-209	ENST00000490127	MTMR2	Q13614	643 aa		13.7	□□□□□ -0.22
RBM3-209	ENST00000490127	C7orf61	Q8IZ16	206 aa		13.7	□□□□□ -0.22
RBM3-209	ENST00000490127	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.7	□□□□□ -0.22
RBM3-209	ENST00000490127	MAGEB6	Q8N7X4	407 aa		13.7	□□□□□ -0.22
RBM3-209	ENST00000490127	GPRC5A	Q8NFJ5	357 aa		13.7	□□□□□ -0.22
RBM3-209	ENST00000490127	TGFBRAP1	Q8WUH2	860 aa		13.7	□□□□□ -0.22
RBM3-209	ENST00000490127	DNAJC2	Q99543	621 aa	Known RBP	13.7	□□□□□ -0.22
RBM3-209	ENST00000490127	P2RX7	Q99572	595 aa	Known RBP	13.7	□□□□□ -0.22
RBM3-209	ENST00000490127	DCTPP1	Q9H773	170 aa		13.7	□□□□□ -0.22
RBM3-209	ENST00000490127	FOCAD	Q5VW36	1801 aa		13.69	□□□□□ -0.22
RBM3-209	ENST00000490127	FLT1	P17948	1338 aa		13.69	□□□□□ -0.22
RBM3-209	ENST00000490127	SOX1	O00570	391 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM3-209	ENST00000490127	SMARCA5	O60264	1052 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM3-209	ENST00000490127	CERS3	Q8IU89	383 aa		13.69	□□□□□ -0.22
RBM3-209	ENST00000490127	MAPKAPK5	Q8IW41	473 aa		13.69	□□□□□ -0.22
RBM3-209	ENST00000490127	CCAR1	Q8IX12	1150 aa	Known RBP	13.69	□□□□□ -0.22
RBM3-209	ENST00000490127	SLC17A8	Q8NDX2	589 aa		13.69	□□□□□ -0.22
RBM3-209	ENST00000490127	NUDT12	Q9BQG2	462 aa		13.69	□□□□□ -0.22
RBM3-209	ENST00000490127	C11orf49	Q9H6J7	331 aa		13.69	□□□□□ -0.22
RBM3-209	ENST00000490127	GINM1	Q9NU53	330 aa		13.69	□□□□□ -0.22
RBM3-209	ENST00000490127	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM3-209	ENST00000490127	PCDHB15	Q9Y5E8	787 aa		13.69	□□□□□ -0.22
RBM3-209	ENST00000490127	LOC285556	D6RIA3	1793 aa		13.68	□□□□□ -0.22
RBM3-209	ENST00000490127	USP17L10	C9JJH3	530 aa		13.68	□□□□□ -0.22
RBM3-209	ENST00000490127	GOLIM4	O00461	696 aa		13.68	□□□□□ -0.22
RBM3-209	ENST00000490127	ATP5J	P18859	108 aa		13.68	□□□□□ -0.22
RBM3-209	ENST00000490127	BMP8B	P34820	402 aa		13.68	□□□□□ -0.22
RBM3-209	ENST00000490127	HERVK_113	P62684	666 aa		13.68	□□□□□ -0.22
RBM3-209	ENST00000490127	DYNLL1	P63167	89 aa	Known RBP	13.68	□□□□□ -0.22
RBM3-209	ENST00000490127	TRMT44	Q8IYL2	757 aa	Known RBP	13.68	□□□□□ -0.22
RBM3-209	ENST00000490127	MIGA1	Q8NAN2	632 aa		13.68	□□□□□ -0.22
RBM3-209	ENST00000490127	TRIB2	Q92519	343 aa		13.68	□□□□□ -0.22
RBM3-209	ENST00000490127	LRCH3	Q96II8	777 aa		13.68	□□□□□ -0.22
RBM3-209	ENST00000490127	GDF15	Q99988	308 aa		13.68	□□□□□ -0.22
RBM3-209	ENST00000490127	OGDHL	Q9ULD0	1010 aa		13.68	□□□□□ -0.22
RBM3-209	ENST00000490127	ATAD5	Q96QE3	1844 aa		13.68	□□□□□ -0.22
RBM3-209	ENST00000490127	CDK5RAP2	Q96SN8	1893 aa		13.67	□□□□□ -0.22
RBM3-209	ENST00000490127	GDF11	O95390	407 aa		13.67	□□□□□ -0.22
RBM3-209	ENST00000490127	HLA-DOA	P06340	250 aa		13.67	□□□□□ -0.22
RBM3-209	ENST00000490127	XRCC5	P13010	732 aa	Known RBP	13.67	□□□□□ -0.22
RBM3-209	ENST00000490127	PRKAR2A	P13861	404 aa	Known RBP	13.67	□□□□□ -0.22
RBM3-209	ENST00000490127	PDE6A	P16499	860 aa		13.67	□□□□□ -0.22
RBM3-209	ENST00000490127	MAPK4	P31152	587 aa		13.67	□□□□□ -0.22
RBM3-209	ENST00000490127	JAG1	P78504	1218 aa		13.67	□□□□□ -0.22
RBM3-209	ENST00000490127	METTL16	Q86W50	562 aa	Known RBP	13.67	□□□□□ -0.22
RBM3-209	ENST00000490127	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM3-209	ENST00000490127	SOCS4	Q8WXH5	440 aa		13.67	□□□□□ -0.22
RBM3-209	ENST00000490127	BOLA2	Q9H3K6	86 aa		13.67	□□□□□ -0.22
RBM3-209	ENST00000490127	TXNRD2	Q9NNW7	524 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms