RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 STX10O60499 249 aa5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 IFIT2P09913 472 aaKnown RBP5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 SLC8A1P32418 973 aa5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 AMPHP49418 695 aa5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 CDR1P51861 262 aa5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 VSNL1P62760 191 aa5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 PIP4K2BP78356 416 aa5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 FANCCQ00597 558 aa5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 ACTN3Q08043 901 aaPredicted RBP5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 USP17L24Q0WX57 530 aa5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 ST3GAL1Q11201 340 aa5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 ANKRD1Q15327 319 aa5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 ME3Q16798 604 aa5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 FAM98CQ17RN3 349 aaKnown RBP5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 SKIDA1Q1XH10 827 aa5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 FILIP1LQ4L180 1135 aa5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 CEP85LQ5SZL2 805 aa5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 FAM177A1Q8N128 213 aaPredicted RBP5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 ARHGEF40Q8TER5 1519 aa5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 CCDC12Q8WUD4 166 aaPredicted RBP5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 KAT14Q9H8E8 782 aa5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 SUGCTQ9HAC7 445 aa5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 DDX20Q9UHI6 824 aaKnown RBP5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 NRXN1Q9ULB1 1477 aa5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 MYO6Q9UM54 1294 aa5.4□□□□□ -1.54
SNRNP40-206ENST00000489853 ADCY9O60503 1353 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 ELL2O00472 640 aaPredicted RBP5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 DIAPH1O60610 1272 aaKnown RBP5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 CAND2O75155 1236 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 LGR5O75473 907 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 KCNC4Q03721 635 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 MTA1Q13330 715 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 STIM1Q13586 685 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 NCOA4Q13772 614 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 DCTN1Q14203 1278 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 SNCBQ16143 134 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 NFE2L2Q16236 605 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 WHAMMP3Q1A5X7 153 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 CCDC40Q4G0X9 1142 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 CDCA2Q69YH5 1023 aaPredicted RBP5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 RETREG3Q86VR2 466 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 TMEM139Q8IV31 216 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 VSTM4Q8IW00 320 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 RPUSD2Q8IZ73 545 aaKnown RBP5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 C8orf58Q8NAV2 365 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 DRAXINQ8NBI3 349 aaPredicted RBP5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 KIF9Q9HAQ2 790 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 MBIPQ9NS73 344 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 HPCAL4Q9UM19 191 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 HPS5Q9UPZ3 1129 aa5.4□□□□□ -1.55
SNRNP40-206ENST00000489853 SPHKAPQ2M3C7 1700 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 ABCA6Q8N139 1617 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 LTBP4Q8N2S1 1624 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 EFCAB6Q5THR3 1501 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 CTAGE15A4D2H0 777 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 EME2A4GXA9 379 aaPredicted RBP5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 ZBBXA8MT70 800 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 NBPF7P0C2Y1 421 aaPredicted RBP5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 CTAGE8P0CG41 777 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 TOP1P11387 765 aaKnown RBP5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 PSMA5P28066 241 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 UBASH3AP57075 661 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 NLRP12P59046 1061 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 RESTQ13127 1097 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 ELOAQ14241 798 aaKnown RBP5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 NAA25Q14CX7 972 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 TBC1D25Q3MII6 688 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 MORN1Q5T089 497 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 LARP1Q6PKG0 1096 aaKnown RBP5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 ANKRD23Q86SG2 305 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 CTAGE6Q86UF2 777 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 UNC5CLQ8IV45 518 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 CTAGE4Q8IX94 777 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 ZNF513Q8N8E2 541 aaPredicted RBP5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 NECAB1Q8N987 351 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 HOOK2Q96ED9 719 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 RSRC1Q96IZ7 334 aaKnown RBP5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 JAKMIP1Q96N16 626 aaKnown RBP5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 MEIS3Q99687 375 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 SH3GL2Q99962 352 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 STK31Q9BXU1 1019 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 IL25Q9H293 177 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 ZSWIM4Q9H7M6 989 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 VCPKMTQ9H867 229 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 PUF60Q9UHX1 559 aaKnown RBP5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 TSR3Q9UJK0 312 aaKnown RBP5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 TPCN1Q9ULQ1 816 aa5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 COL3A1P02461 1466 aaPredicted RBP5.39□□□□□ -1.55
SNRNP40-206ENST00000489853 GOLGA6L7A0A1B0GV03 622 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 RBM47A0AV96 593 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 GOLGA6CA6NDK9 693 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 GOLGA8KD6RF30 607 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 PFKFB2O60825 505 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 RHOXF2BP0C7M4 288 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 GOLGA6DP0CG33 693 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 SETSIPP0DME0 302 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 CPA1P15085 419 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 ATP5JP18859 108 aa5.38□□□□□ -1.55
SNRNP40-206ENST00000489853 GBP2P32456 591 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms