RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 RBPJLQ9UBG7 517 aa18.42■□□□□ 0.54
SDHAF3-204ENST00000489852 CLTBP09497 229 aa18.41■□□□□ 0.54
SDHAF3-204ENST00000489852 FLIIQ13045 1269 aa18.41■□□□□ 0.54
SDHAF3-204ENST00000489852 PLXNA1Q9UIW2 1896 aa18.41■□□□□ 0.54
SDHAF3-204ENST00000489852 PRDX5P30044 214 aa18.4■□□□□ 0.54
SDHAF3-204ENST00000489852 HOXA7P31268 230 aaPredicted RBP18.4■□□□□ 0.54
SDHAF3-204ENST00000489852 ADCYAP1R1P41586 468 aa18.4■□□□□ 0.54
SDHAF3-204ENST00000489852 ATP2B2Q01814 1243 aa18.4■□□□□ 0.54
SDHAF3-204ENST00000489852 METTL24Q5JXM2 366 aa18.4■□□□□ 0.54
SDHAF3-204ENST00000489852 FERMT2Q96AC1 680 aa18.4■□□□□ 0.54
SDHAF3-204ENST00000489852 OSBPL5Q9H0X9 879 aaPredicted RBP18.4■□□□□ 0.54
SDHAF3-204ENST00000489852 REV3LO60673 3130 aa18.4■□□□□ 0.54
SDHAF3-204ENST00000489852 USP17L5A8MUK1 530 aa18.39■□□□□ 0.53
SDHAF3-204ENST00000489852 GRXCR1A8MXD5 290 aa18.39■□□□□ 0.53
SDHAF3-204ENST00000489852 SMIM22K7EJ46 135 aa18.39■□□□□ 0.53
SDHAF3-204ENST00000489852 KIAA0355O15063 1070 aa18.39■□□□□ 0.53
SDHAF3-204ENST00000489852 CYP2C19P33261 490 aa18.39■□□□□ 0.53
SDHAF3-204ENST00000489852 TRPV1Q8NER1 839 aa18.39■□□□□ 0.53
SDHAF3-204ENST00000489852 PAGR1Q9BTK6 254 aa18.39■□□□□ 0.53
SDHAF3-204ENST00000489852 FAM196BA6NMK8 535 aa18.38■□□□□ 0.53
SDHAF3-204ENST00000489852 TBC1D12O60347 775 aa18.38■□□□□ 0.53
SDHAF3-204ENST00000489852 GLRX3O76003 335 aaKnown RBP18.38■□□□□ 0.53
SDHAF3-204ENST00000489852 PDE8BO95263 885 aa18.38■□□□□ 0.53
SDHAF3-204ENST00000489852 LDHBP07195 334 aaKnown RBP18.38■□□□□ 0.53
SDHAF3-204ENST00000489852 ANO1Q5XXA6 986 aa18.38■□□□□ 0.53
SDHAF3-204ENST00000489852 MICALL1Q8N3F8 863 aa18.38■□□□□ 0.53
SDHAF3-204ENST00000489852 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.38■□□□□ 0.53
SDHAF3-204ENST00000489852 AS3MTQ9HBK9 375 aa18.38■□□□□ 0.53
SDHAF3-204ENST00000489852 TMOD4Q9NZQ9 345 aa18.38■□□□□ 0.53
SDHAF3-204ENST00000489852 NDUFB9Q9Y6M9 179 aa18.38■□□□□ 0.53
SDHAF3-204ENST00000489852 CHD9Q3L8U1 2897 aa18.37■□□□□ 0.53
SDHAF3-204ENST00000489852 PICALMQ13492 652 aa18.37■□□□□ 0.53
SDHAF3-204ENST00000489852 SKIV2LQ15477 1246 aaKnown RBP18.37■□□□□ 0.53
SDHAF3-204ENST00000489852 KHSRPQ92945 711 aaKnown RBP eCLIP18.37■□□□□ 0.534e-8■■□□□ 13.5
SDHAF3-204ENST00000489852 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.37■□□□□ 0.53
SDHAF3-204ENST00000489852 MYH13Q9UKX3 1938 aa18.37■□□□□ 0.53
SDHAF3-204ENST00000489852 GRM8O00222 908 aa18.36■□□□□ 0.53
SDHAF3-204ENST00000489852 ERC2O15083 957 aa18.36■□□□□ 0.53
SDHAF3-204ENST00000489852 IFIT1P09914 478 aaKnown RBP18.36■□□□□ 0.53
SDHAF3-204ENST00000489852 CYBAP13498 195 aa18.36■□□□□ 0.53
SDHAF3-204ENST00000489852 MTMR2Q13614 643 aa18.36■□□□□ 0.53
SDHAF3-204ENST00000489852 RFX7Q2KHR2 1363 aa18.36■□□□□ 0.53
SDHAF3-204ENST00000489852 LRRC24Q50LG9 513 aa18.36■□□□□ 0.53
SDHAF3-204ENST00000489852 VGLL2Q8N8G2 317 aa18.36■□□□□ 0.53
SDHAF3-204ENST00000489852 GTF3C2Q8WUA4 911 aaPredicted RBP18.36■□□□□ 0.53
SDHAF3-204ENST00000489852 DDX4Q9NQI0 724 aaKnown RBP18.36■□□□□ 0.53
SDHAF3-204ENST00000489852 TMEM39AQ9NV64 488 aa18.36■□□□□ 0.53
SDHAF3-204ENST00000489852 MSRAQ9UJ68 235 aa18.36■□□□□ 0.53
SDHAF3-204ENST00000489852 KIF16BQ96L93 1317 aa18.35■□□□□ 0.53
SDHAF3-204ENST00000489852 SLC15A5A6NIM6 579 aa18.35■□□□□ 0.53
SDHAF3-204ENST00000489852 BACE1P56817 501 aa18.35■□□□□ 0.53
SDHAF3-204ENST00000489852 WDR43Q15061 677 aaKnown RBP eCLIP18.35■□□□□ 0.53
SDHAF3-204ENST00000489852 WDR78Q5VTH9 848 aa18.35■□□□□ 0.53
SDHAF3-204ENST00000489852 ATAD5Q96QE3 1844 aa18.35■□□□□ 0.53
SDHAF3-204ENST00000489852 PQBP1O60828 265 aaKnown RBP18.34■□□□□ 0.53
SDHAF3-204ENST00000489852 HOXC6P09630 235 aa18.34■□□□□ 0.53
SDHAF3-204ENST00000489852 CAP2P40123 477 aa18.34■□□□□ 0.53
SDHAF3-204ENST00000489852 NHLH1Q02575 133 aa18.34■□□□□ 0.53
SDHAF3-204ENST00000489852 LRRC41Q15345 812 aa18.34■□□□□ 0.53
SDHAF3-204ENST00000489852 RAB30Q15771 203 aa18.34■□□□□ 0.53
SDHAF3-204ENST00000489852 BEND3Q5T5X7 828 aa18.34■□□□□ 0.53
SDHAF3-204ENST00000489852 NPLOC4Q8TAT6 608 aa18.34■□□□□ 0.53
SDHAF3-204ENST00000489852 HERVK_113Q902F9 699 aa18.34■□□□□ 0.53
SDHAF3-204ENST00000489852 PRR33A8MZF0 331 aa18.33■□□□□ 0.52
SDHAF3-204ENST00000489852 PI4K2BG5E9Z4 385 aa18.33■□□□□ 0.52
SDHAF3-204ENST00000489852 PTPREP23469 700 aa18.33■□□□□ 0.52
SDHAF3-204ENST00000489852 CCNA1P78396 465 aa18.33■□□□□ 0.52
SDHAF3-204ENST00000489852 SLC44A5Q8NCS7 719 aa18.33■□□□□ 0.52
SDHAF3-204ENST00000489852 WDR18Q9BV38 432 aa18.33■□□□□ 0.52
SDHAF3-204ENST00000489852 SLC28A3Q9HAS3 691 aa18.33■□□□□ 0.52
SDHAF3-204ENST00000489852 C9orf78Q9NZ63 289 aaPredicted RBP18.33■□□□□ 0.52
SDHAF3-204ENST00000489852 SEPT4O43236 478 aa18.32■□□□□ 0.52
SDHAF3-204ENST00000489852 TLL1O43897 1013 aa18.32■□□□□ 0.52
SDHAF3-204ENST00000489852 RRP1BQ14684 758 aaKnown RBP18.32■□□□□ 0.52
SDHAF3-204ENST00000489852 PUM3Q15397 648 aaKnown RBP18.32■□□□□ 0.52
SDHAF3-204ENST00000489852 TWISTNBQ3B726 338 aaPredicted RBP18.32■□□□□ 0.52
SDHAF3-204ENST00000489852 CCDC174Q6PII3 467 aa18.32■□□□□ 0.52
SDHAF3-204ENST00000489852 NKX2-4Q9H2Z4 354 aa18.32■□□□□ 0.52
SDHAF3-204ENST00000489852 ADAMTS8Q9UP79 889 aa18.32■□□□□ 0.52
SDHAF3-204ENST00000489852 IVNS1ABPQ9Y6Y0 642 aa18.32■□□□□ 0.52
SDHAF3-204ENST00000489852 CACNA1AO00555 2505 aa18.31■□□□□ 0.52
SDHAF3-204ENST00000489852 MYH2Q9UKX2 1941 aa18.31■□□□□ 0.52
SDHAF3-204ENST00000489852 GAKO14976 1311 aa18.31■□□□□ 0.52
SDHAF3-204ENST00000489852 F6X3S4 739 aa18.31■□□□□ 0.52
SDHAF3-204ENST00000489852 NCBP3Q53F19 620 aaKnown RBP18.31■□□□□ 0.52
SDHAF3-204ENST00000489852 TMEM240Q5SV17 173 aa18.31■□□□□ 0.52
SDHAF3-204ENST00000489852 RASIP1Q5U651 963 aa18.31■□□□□ 0.52
SDHAF3-204ENST00000489852 CCER1Q8TC90 406 aaPredicted RBP18.31■□□□□ 0.52
SDHAF3-204ENST00000489852 CHD7Q9P2D1 2997 aa18.3■□□□□ 0.52
SDHAF3-204ENST00000489852 LRRC37A2A6NM11 1700 aa18.3■□□□□ 0.52
SDHAF3-204ENST00000489852 C19orf81C9J6K1 198 aa18.3■□□□□ 0.52
SDHAF3-204ENST00000489852 TIMP1P01033 207 aa18.3■□□□□ 0.52
SDHAF3-204ENST00000489852 IGHA2P01877 340 aa18.3■□□□□ 0.52
SDHAF3-204ENST00000489852 FGFR2P21802 821 aa18.3■□□□□ 0.52
SDHAF3-204ENST00000489852 C16orf59Q7L2K0 433 aa18.3■□□□□ 0.52
SDHAF3-204ENST00000489852 TSR2Q969E8 191 aaKnown RBP18.3■□□□□ 0.52
SDHAF3-204ENST00000489852 PHF24Q9UPV7 400 aa18.3■□□□□ 0.52
SDHAF3-204ENST00000489852 RABGAP1Q9Y3P9 1069 aa18.3■□□□□ 0.52
SDHAF3-204ENST00000489852 FAAP100Q0VG06 881 aa18.29■□□□□ 0.52
SDHAF3-204ENST00000489852 PPIGQ13427 754 aaKnown RBP eCLIP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms