RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 STK11IPQ8N1F8 1099 aa12.91□□□□□ -0.34
TFF3-203ENST00000489676 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.91□□□□□ -0.34
TFF3-203ENST00000489676 KLRG1Q96E93 195 aa12.91□□□□□ -0.34
TFF3-203ENST00000489676 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.91□□□□□ -0.34
TFF3-203ENST00000489676 ZNF341Q9BYN7 854 aa12.91□□□□□ -0.34
TFF3-203ENST00000489676 CNNM2Q9H8M5 875 aa12.91□□□□□ -0.34
TFF3-203ENST00000489676 B4E1Z4 1266 aa12.9□□□□□ -0.34
TFF3-203ENST00000489676 CAP2P40123 477 aa12.9□□□□□ -0.34
TFF3-203ENST00000489676 ANTXR2P58335 489 aa12.9□□□□□ -0.34
TFF3-203ENST00000489676 FSTL1Q12841 308 aa12.9□□□□□ -0.34
TFF3-203ENST00000489676 CYB5R4Q7L1T6 521 aa12.9□□□□□ -0.34
TFF3-203ENST00000489676 TNS4Q8IZW8 715 aa12.9□□□□□ -0.34
TFF3-203ENST00000489676 TM6SF1Q9BZW5 370 aa12.9□□□□□ -0.34
TFF3-203ENST00000489676 ZNF287Q9HBT7 754 aa12.9□□□□□ -0.34
TFF3-203ENST00000489676 IGKV6D-41A0A0C4DH26 115 aa12.89□□□□□ -0.35
TFF3-203ENST00000489676 PPP1R12BO60237 982 aaPredicted RBP12.89□□□□□ -0.35
TFF3-203ENST00000489676 KDM4AO75164 1064 aa12.89□□□□□ -0.35
TFF3-203ENST00000489676 AKR1B1P15121 316 aa12.89□□□□□ -0.35
TFF3-203ENST00000489676 INPP5BP32019 993 aa12.89□□□□□ -0.35
TFF3-203ENST00000489676 GUCY1A2P33402 732 aa12.89□□□□□ -0.35
TFF3-203ENST00000489676 NF2P35240 595 aa12.89□□□□□ -0.35
TFF3-203ENST00000489676 FKBP1BP68106 108 aa12.89□□□□□ -0.35
TFF3-203ENST00000489676 NOL9Q5SY16 702 aaKnown RBP12.89□□□□□ -0.35
TFF3-203ENST00000489676 CST9Q5W186 159 aa12.89□□□□□ -0.35
TFF3-203ENST00000489676 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.89□□□□□ -0.35
TFF3-203ENST00000489676 NCOA7Q8NI08 942 aa12.89□□□□□ -0.35
TFF3-203ENST00000489676 CCDC17Q96LX7 622 aa12.89□□□□□ -0.35
TFF3-203ENST00000489676 JAKMIP1Q96N16 626 aaKnown RBP12.89□□□□□ -0.35
TFF3-203ENST00000489676 NEK1Q96PY6 1258 aa12.89□□□□□ -0.35
TFF3-203ENST00000489676 WRNIP1Q96S55 665 aa12.89□□□□□ -0.35
TFF3-203ENST00000489676 TRIM34Q9BYJ4 488 aa12.89□□□□□ -0.35
TFF3-203ENST00000489676 KRT23Q9C075 422 aa12.89□□□□□ -0.35
TFF3-203ENST00000489676 MKNK2Q9HBH9 465 aa12.89□□□□□ -0.35
TFF3-203ENST00000489676 ZBTB21Q9ULJ3 1066 aa12.89□□□□□ -0.35
TFF3-203ENST00000489676 WDR19Q8NEZ3 1342 aa12.88□□□□□ -0.35
TFF3-203ENST00000489676 CTNND1O60716 968 aaKnown RBP12.88□□□□□ -0.35
TFF3-203ENST00000489676 CELF2O95319 508 aaKnown RBP12.88□□□□□ -0.35
TFF3-203ENST00000489676 GDF11O95390 407 aa12.88□□□□□ -0.35
TFF3-203ENST00000489676 NOVP48745 357 aa12.88□□□□□ -0.35
TFF3-203ENST00000489676 EXOSC10Q01780 885 aaKnown RBP12.88□□□□□ -0.35
TFF3-203ENST00000489676 CERKLQ49MI3 558 aaPredicted RBP12.88□□□□□ -0.35
TFF3-203ENST00000489676 FAM47AQ5JRC9 791 aa12.88□□□□□ -0.35
TFF3-203ENST00000489676 RRP12Q5JTH9 1297 aaKnown RBP12.88□□□□□ -0.35
TFF3-203ENST00000489676 LDLRAD1Q5T700 205 aa12.88□□□□□ -0.35
TFF3-203ENST00000489676 MOB2Q70IA6 237 aa12.88□□□□□ -0.35
TFF3-203ENST00000489676 RALYLQ86SE5 291 aaKnown RBP12.88□□□□□ -0.35
TFF3-203ENST00000489676 NEDD1Q8NHV4 660 aa12.88□□□□□ -0.35
TFF3-203ENST00000489676 ESR2Q92731 530 aa12.88□□□□□ -0.35
TFF3-203ENST00000489676 GBA2Q9HCG7 927 aaPredicted RBP12.88□□□□□ -0.35
TFF3-203ENST00000489676 ZSWIM6Q9HCJ5 1215 aa12.88□□□□□ -0.35
TFF3-203ENST00000489676 ZSWIM5Q9P217 1185 aa12.88□□□□□ -0.35
TFF3-203ENST00000489676 SNCAIPQ9Y6H5 919 aa12.88□□□□□ -0.35
TFF3-203ENST00000489676 RANBP6O60518 1105 aaKnown RBP12.87□□□□□ -0.35
TFF3-203ENST00000489676 GH2P01242 217 aa12.87□□□□□ -0.35
TFF3-203ENST00000489676 CASTP20810 708 aaKnown RBP12.87□□□□□ -0.35
TFF3-203ENST00000489676 IREB2P48200 963 aaKnown RBP12.87□□□□□ -0.35
TFF3-203ENST00000489676 TFAP4Q01664 338 aa12.87□□□□□ -0.35
TFF3-203ENST00000489676 TRDNQ13061 729 aa12.87□□□□□ -0.35
TFF3-203ENST00000489676 PRKG1Q13976 671 aa12.87□□□□□ -0.35
TFF3-203ENST00000489676 VGLL4Q14135 290 aa12.87□□□□□ -0.35
TFF3-203ENST00000489676 ABCB5Q2M3G0 1257 aa12.87□□□□□ -0.35
TFF3-203ENST00000489676 TMEM179Q6ZVK1 233 aa12.87□□□□□ -0.35
TFF3-203ENST00000489676 CLEC10AQ8IUN9 316 aa12.87□□□□□ -0.35
TFF3-203ENST00000489676 SCYL3Q8IZE3 742 aa12.87□□□□□ -0.35
TFF3-203ENST00000489676 ZNF408Q9H9D4 720 aa12.87□□□□□ -0.35
TFF3-203ENST00000489676 IL17RBQ9NRM6 502 aa12.87□□□□□ -0.35
TFF3-203ENST00000489676 TOMM22Q9NS69 142 aa12.87□□□□□ -0.35
TFF3-203ENST00000489676 GINM1Q9NU53 330 aa12.87□□□□□ -0.35
TFF3-203ENST00000489676 TCP11L1Q9NUJ3 509 aa12.87□□□□□ -0.35
TFF3-203ENST00000489676 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.87□□□□□ -0.35
TFF3-203ENST00000489676 ANGEL1Q9UNK9 670 aaKnown RBP12.87□□□□□ -0.35
TFF3-203ENST00000489676 PTPRFP10586 1907 aa12.87□□□□□ -0.35
TFF3-203ENST00000489676 MYH4Q9Y623 1939 aa12.86□□□□□ -0.35
TFF3-203ENST00000489676 TSPY2A6NKD2 308 aa12.86□□□□□ -0.35
TFF3-203ENST00000489676 NMT2O60551 498 aa12.86□□□□□ -0.35
TFF3-203ENST00000489676 ASNSP08243 561 aa12.86□□□□□ -0.35
TFF3-203ENST00000489676 HMGB1P09429 215 aaKnown RBP12.86□□□□□ -0.35
TFF3-203ENST00000489676 TSPY3P0CV98 308 aa12.86□□□□□ -0.35
TFF3-203ENST00000489676 TSPY8P0CW00 308 aa12.86□□□□□ -0.35
TFF3-203ENST00000489676 CPA1P15085 419 aa12.86□□□□□ -0.35
TFF3-203ENST00000489676 RPS6KB1P23443 525 aa12.86□□□□□ -0.35
TFF3-203ENST00000489676 PSMA5P28066 241 aa12.86□□□□□ -0.35
TFF3-203ENST00000489676 MAP3K9P80192 1104 aa12.86□□□□□ -0.35
TFF3-203ENST00000489676 SEC23AQ15436 765 aa12.86□□□□□ -0.35
TFF3-203ENST00000489676 RCSD1Q6JBY9 416 aa12.86□□□□□ -0.35
TFF3-203ENST00000489676 BLOC1S2Q6QNY1 142 aa12.86□□□□□ -0.35
TFF3-203ENST00000489676 DHX32Q7L7V1 743 aaKnown RBP12.86□□□□□ -0.35
TFF3-203ENST00000489676 ARMC9Q7Z3E5 817 aa12.86□□□□□ -0.35
TFF3-203ENST00000489676 ZNF444Q8N0Y2 327 aaPredicted RBP12.86□□□□□ -0.35
TFF3-203ENST00000489676 JMYQ8N9B5 988 aa12.86□□□□□ -0.35
TFF3-203ENST00000489676 ZKSCAN4Q969J2 545 aaPredicted RBP12.86□□□□□ -0.35
TFF3-203ENST00000489676 MTA3Q9BTC8 594 aa12.86□□□□□ -0.35
TFF3-203ENST00000489676 AGXT2Q9BYV1 514 aa12.86□□□□□ -0.35
TFF3-203ENST00000489676 UPF3BQ9BZI7 483 aaKnown RBP12.86□□□□□ -0.35
TFF3-203ENST00000489676 UNCXA6NJT0 531 aa12.85□□□□□ -0.35
TFF3-203ENST00000489676 SH2B2O14492 632 aaPredicted RBP12.85□□□□□ -0.35
TFF3-203ENST00000489676 PRC1O43663 620 aa12.85□□□□□ -0.35
TFF3-203ENST00000489676 MCM5P33992 734 aa12.85□□□□□ -0.35
TFF3-203ENST00000489676 SEPT2Q15019 361 aa12.85□□□□□ -0.35
TFF3-203ENST00000489676 RUFY3Q7L099 469 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms