RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 SKIDA1Q1XH10 827 aa11.31□□□□□ -0.6
NOD1-208ENST00000489614 USP48Q86UV5 1035 aa11.31□□□□□ -0.6
NOD1-208ENST00000489614 SUGT1Q9Y2Z0 365 aa11.31□□□□□ -0.6
NOD1-208ENST00000489614 FGAP02671 866 aa11.31□□□□□ -0.6
NOD1-208ENST00000489614 PPP4CP60510 307 aa11.31□□□□□ -0.6
NOD1-208ENST00000489614 NBPF20Q3BBV1 942 aa11.31□□□□□ -0.6
NOD1-208ENST00000489614 CC2D2BQ6DHV5 1058 aa11.31□□□□□ -0.6
NOD1-208ENST00000489614 LCORLQ8N3X6 602 aa11.31□□□□□ -0.6
NOD1-208ENST00000489614 WDR66Q8TBY9 1149 aa11.31□□□□□ -0.6
NOD1-208ENST00000489614 PSMD1Q99460 953 aa11.31□□□□□ -0.6
NOD1-208ENST00000489614 ANKIB1Q9P2G1 1089 aa11.31□□□□□ -0.6
NOD1-208ENST00000489614 TPM3P06753 285 aa11.3□□□□□ -0.6
NOD1-208ENST00000489614 VPS33BQ9H267 617 aa11.3□□□□□ -0.6
NOD1-208ENST00000489614 MED4Q9NPJ6 270 aa11.3□□□□□ -0.6
NOD1-208ENST00000489614 COL2A1P02458 1487 aaPredicted RBP11.3□□□□□ -0.6
NOD1-208ENST00000489614 USP27XA6NNY8 438 aa11.3□□□□□ -0.6
NOD1-208ENST00000489614 GNAT2P19087 354 aa11.3□□□□□ -0.6
NOD1-208ENST00000489614 MB21D2Q8IYB1 491 aaPredicted RBP11.3□□□□□ -0.6
NOD1-208ENST00000489614 FBXO18Q8NFZ0 1043 aa11.3□□□□□ -0.6
NOD1-208ENST00000489614 CCDC34Q96HJ3 373 aa11.3□□□□□ -0.6
NOD1-208ENST00000489614 PRDX5P30044 214 aa11.29□□□□□ -0.6
NOD1-208ENST00000489614 KRT32Q14532 448 aa11.29□□□□□ -0.6
NOD1-208ENST00000489614 MNS1Q8NEH6 495 aa11.29□□□□□ -0.6
NOD1-208ENST00000489614 ATAD5Q96QE3 1844 aa11.29□□□□□ -0.6
NOD1-208ENST00000489614 E7EWF7 191 aa11.29□□□□□ -0.6
NOD1-208ENST00000489614 KIF1CO43896 1103 aaKnown RBP11.29□□□□□ -0.6
NOD1-208ENST00000489614 SEC31AO94979 1220 aaKnown RBP11.29□□□□□ -0.6
NOD1-208ENST00000489614 MAGEA9P43362 315 aa11.29□□□□□ -0.6
NOD1-208ENST00000489614 FOXR1Q6PIV2 292 aa11.29□□□□□ -0.6
NOD1-208ENST00000489614 CERS5Q8N5B7 392 aa11.29□□□□□ -0.6
NOD1-208ENST00000489614 IDH1O75874 414 aaKnown RBP11.29□□□□□ -0.6
NOD1-208ENST00000489614 AK2P54819 239 aa11.29□□□□□ -0.6
NOD1-208ENST00000489614 WASHC4Q2M389 1173 aa11.29□□□□□ -0.6
NOD1-208ENST00000489614 PRPF38AQ8NAV1 312 aaKnown RBP11.29□□□□□ -0.6
NOD1-208ENST00000489614 LRRN4CLQ8ND94 238 aa11.29□□□□□ -0.6
NOD1-208ENST00000489614 ERO1AQ96HE7 468 aa11.29□□□□□ -0.6
NOD1-208ENST00000489614 INTS4Q96HW7 963 aaKnown RBP11.29□□□□□ -0.6
NOD1-208ENST00000489614 IQSEC3Q9UPP2 1182 aaPredicted RBP11.29□□□□□ -0.6
NOD1-208ENST00000489614 EIF3CLB5ME19 914 aaKnown RBP11.28□□□□□ -0.6
NOD1-208ENST00000489614 MBD4O95243 580 aa11.28□□□□□ -0.6
NOD1-208ENST00000489614 DPEP1P16444 411 aa11.28□□□□□ -0.6
NOD1-208ENST00000489614 SCP2P22307 547 aa11.28□□□□□ -0.6
NOD1-208ENST00000489614 OAS2P29728 719 aaKnown RBP11.28□□□□□ -0.6
NOD1-208ENST00000489614 PTPN14Q15678 1187 aa11.28□□□□□ -0.6
NOD1-208ENST00000489614 MCTP2Q6DN12 878 aa11.28□□□□□ -0.6
NOD1-208ENST00000489614 IFNL3Q8IZI9 196 aa11.28□□□□□ -0.6
NOD1-208ENST00000489614 EIF3CQ99613 913 aaKnown RBP11.28□□□□□ -0.6
NOD1-208ENST00000489614 MRIQ9BWK5 157 aa11.28□□□□□ -0.6
NOD1-208ENST00000489614 MROH7-TTC4A0A0A0MT08 1334 aa11.28□□□□□ -0.6
NOD1-208ENST00000489614 LTBP3Q9NS15 1303 aa11.28□□□□□ -0.6
NOD1-208ENST00000489614 ST18O60284 1047 aa11.28□□□□□ -0.6
NOD1-208ENST00000489614 ANTXR2P58335 489 aa11.28□□□□□ -0.6
NOD1-208ENST00000489614 RNF20Q5VTR2 975 aa11.28□□□□□ -0.6
NOD1-208ENST00000489614 TBC1D10CQ8IV04 446 aa11.28□□□□□ -0.6
NOD1-208ENST00000489614 GOLGA5Q8TBA6 731 aa11.28□□□□□ -0.6
NOD1-208ENST00000489614 TMX3Q96JJ7 454 aa11.28□□□□□ -0.6
NOD1-208ENST00000489614 PDRG1Q9NUG6 133 aa11.28□□□□□ -0.6
NOD1-208ENST00000489614 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.28□□□□□ -0.6
NOD1-208ENST00000489614 CD2APQ9Y5K6 639 aa11.28□□□□□ -0.6
NOD1-208ENST00000489614 GPR75-ASB3A0A0A6YYF3 556 aa11.27□□□□□ -0.6
NOD1-208ENST00000489614 SLU7O95391 586 aaKnown RBP11.27□□□□□ -0.6
NOD1-208ENST00000489614 MNAT1P51948 309 aa11.27□□□□□ -0.6
NOD1-208ENST00000489614 NEK4P51957 841 aa11.27□□□□□ -0.6
NOD1-208ENST00000489614 GSCP56915 257 aaPredicted RBP11.27□□□□□ -0.6
NOD1-208ENST00000489614 ARHGAP29Q52LW3 1261 aa11.27□□□□□ -0.6
NOD1-208ENST00000489614 CCDC183Q5T5S1 534 aa11.27□□□□□ -0.6
NOD1-208ENST00000489614 SPTY2D1Q68D10 685 aaPredicted RBP11.27□□□□□ -0.6
NOD1-208ENST00000489614 TTC19Q6DKK2 380 aaPredicted RBP11.27□□□□□ -0.6
NOD1-208ENST00000489614 ARMT1Q9H993 441 aa11.27□□□□□ -0.6
NOD1-208ENST00000489614 LARGE1O95461 756 aa11.27□□□□□ -0.61
NOD1-208ENST00000489614 CASTP20810 708 aaKnown RBP11.27□□□□□ -0.61
NOD1-208ENST00000489614 SBK1Q52WX2 424 aa11.27□□□□□ -0.61
NOD1-208ENST00000489614 DPP8Q6V1X1 898 aaPredicted RBP11.27□□□□□ -0.61
NOD1-208ENST00000489614 STAG1Q8WVM7 1258 aa11.27□□□□□ -0.61
NOD1-208ENST00000489614 JAKMIP1Q96N16 626 aaKnown RBP11.27□□□□□ -0.61
NOD1-208ENST00000489614 TCHHQ07283 1943 aa11.27□□□□□ -0.61
NOD1-208ENST00000489614 MYH4Q9Y623 1939 aa11.27□□□□□ -0.61
NOD1-208ENST00000489614 CPA1P15085 419 aa11.27□□□□□ -0.61
NOD1-208ENST00000489614 RHBDL3P58872 404 aa11.27□□□□□ -0.61
NOD1-208ENST00000489614 TMCO3Q6UWJ1 677 aa11.27□□□□□ -0.61
NOD1-208ENST00000489614 TBC1D22AQ8WUA7 517 aa11.27□□□□□ -0.61
NOD1-208ENST00000489614 SLC24A3Q9HC58 644 aa11.27□□□□□ -0.61
NOD1-208ENST00000489614 PRKAB2O43741 272 aa11.26□□□□□ -0.61
NOD1-208ENST00000489614 CYP7A1P22680 504 aa11.26□□□□□ -0.61
NOD1-208ENST00000489614 PSMA5P28066 241 aa11.26□□□□□ -0.61
NOD1-208ENST00000489614 DACT2Q5SW24 774 aa11.26□□□□□ -0.61
NOD1-208ENST00000489614 NEK1Q96PY6 1258 aa11.26□□□□□ -0.61
NOD1-208ENST00000489614 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.26□□□□□ -0.61
NOD1-208ENST00000489614 MAGEB6P1A0A0J9YX57 407 aa11.26□□□□□ -0.61
NOD1-208ENST00000489614 YDJCA8MPS7 323 aa11.26□□□□□ -0.61
NOD1-208ENST00000489614 ZKSCAN1P17029 563 aaPredicted RBP11.26□□□□□ -0.61
NOD1-208ENST00000489614 DYNLL1P63167 89 aaKnown RBP11.26□□□□□ -0.61
NOD1-208ENST00000489614 NAA16Q6N069 864 aaPredicted RBP11.26□□□□□ -0.61
NOD1-208ENST00000489614 PODNQ7Z5L7 613 aa11.26□□□□□ -0.61
NOD1-208ENST00000489614 CACTINQ8WUQ7 758 aaKnown RBP11.26□□□□□ -0.61
NOD1-208ENST00000489614 EYA3Q99504 573 aa11.26□□□□□ -0.61
NOD1-208ENST00000489614 UPF3BQ9BZI7 483 aaKnown RBP11.26□□□□□ -0.61
NOD1-208ENST00000489614 TRIM5Q9C035 493 aa11.26□□□□□ -0.61
NOD1-208ENST00000489614 RAI14Q9P0K7 980 aa11.26□□□□□ -0.61
NOD1-208ENST00000489614 LRP2BPQ9P2M1 347 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms